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The map label for this gene is lumQ [H]

Identifier: 76819391

GI number: 76819391

Start: 1165823

End: 1166590

Strand: Direct

Name: lumQ [H]

Synonym: BURPS1710b_A0908

Alternate gene names: 76819391

Gene position: 1165823-1166590 (Clockwise)

Preceding gene: 76817652

Following gene: 76819791

Centisome position: 36.64

GC content: 71.74

Gene sequence:

>768_bases
ATGACCCGCCTCGCCGCCCCGAGCCTGTCGCTGCGCCGTTACGGCGCCGTGCAGGCGTCGGACGTGCACGATTTCCATCA
GATCGTGCTCGGCGTCGACGGCGCGATGACGATGACGGTCGACGGCGTCGACGAGCGGATCGACCGCCGCTGCGCGTGGC
TGATTCCGGCCGGCGCGCGGCACGATTACGCGGGCCTCGCCGACAACAGCCAACTGGTGCTCGACTTGCCGCCCGGCTCG
CTCGCGGTGCCCGAGCGGCTGTTCGAGCGCGCCAGGACGATGGCGATCGACCCGGGCCTCACGACGCTCGTCGGCGAACT
CGCGTCGCGCATCGCGCGCGGGCCGCTCGCCGATGCCGCCTCGGCCCGGCGCCTGCACTGGCAAGCGGCCGCGCGGCTAT
GCGGCGCGCTCGTCGGCGAGCTGGACGGCGCGCCGTCGCAGCCCGCCGTCGGGCTCGACTTCGCACGCATCGACGGCTGG
CTGCGCGCGCATCTCGCGCAGCCGCTGCGCATCGCCGATCTCGCCGCGCATTGCGGCTTCGGCATGCGCCGCTTCCATCA
GCTTTTCTGCGAAGCGTTCGGCGAGACGCCGCATCGCTATCTGCAGCGGTTGCGGCTCGACGCCGCCGTCATGTTGCTCG
GGGATCCGAAACATTCGCTGACCGACATCGCGAGCGAAGTCGGATTCGCCGACCAGAGCGCGTTCACGCACGCGTTCACG
AAACGGTTCGGGCTCGCGCCCGGCCGCTGGCGCAGCGATCGGCACTGA

Upstream 100 bases:

>100_bases
CGACGCTCGTGTTCGAAGTCGAACTGCTCGACGTCTGAGCCCGGCGCCGCCCCGCCGCCCGTCGCCCCGTCGCGCGCGTT
CACCGGCCGCCCGCCCGATC

Downstream 100 bases:

>100_bases
GCTTTCCGATGCGCGCGAGCGGGCCGACATCGCACGCGACGTGAAGCACCGACGCCGCGACGATGCAACGACGCGACGAC
TCGAAGAAGGCGCCCCATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MTRLAAPSLSLRRYGAVQASDVHDFHQIVLGVDGAMTMTVDGVDERIDRRCAWLIPAGARHDYAGLADNSQLVLDLPPGS
LAVPERLFERARTMAIDPGLTTLVGELASRIARGPLADAASARRLHWQAAARLCGALVGELDGAPSQPAVGLDFARIDGW
LRAHLAQPLRIADLAAHCGFGMRRFHQLFCEAFGETPHRYLQRLRLDAAVMLLGDPKHSLTDIASEVGFADQSAFTHAFT
KRFGLAPGRWRSDRH

Sequences:

>Translated_255_residues
MTRLAAPSLSLRRYGAVQASDVHDFHQIVLGVDGAMTMTVDGVDERIDRRCAWLIPAGARHDYAGLADNSQLVLDLPPGS
LAVPERLFERARTMAIDPGLTTLVGELASRIARGPLADAASARRLHWQAAARLCGALVGELDGAPSQPAVGLDFARIDGW
LRAHLAQPLRIADLAAHCGFGMRRFHQLFCEAFGETPHRYLQRLRLDAAVMLLGDPKHSLTDIASEVGFADQSAFTHAFT
KRFGLAPGRWRSDRH
>Mature_254_residues
TRLAAPSLSLRRYGAVQASDVHDFHQIVLGVDGAMTMTVDGVDERIDRRCAWLIPAGARHDYAGLADNSQLVLDLPPGSL
AVPERLFERARTMAIDPGLTTLVGELASRIARGPLADAASARRLHWQAAARLCGALVGELDGAPSQPAVGLDFARIDGWL
RAHLAQPLRIADLAAHCGFGMRRFHQLFCEAFGETPHRYLQRLRLDAAVMLLGDPKHSLTDIASEVGFADQSAFTHAFTK
RFGLAPGRWRSDRH

Specific function: Probable transcriptional regulator. Its target gene(s) is not yet known [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI171474011, Length=253, Percent_Identity=25.6916996047431, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 27816; Mature: 27685

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLAAPSLSLRRYGAVQASDVHDFHQIVLGVDGAMTMTVDGVDERIDRRCAWLIPAGAR
CCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCEEEEECCCCC
HDYAGLADNSQLVLDLPPGSLAVPERLFERARTMAIDPGLTTLVGELASRIARGPLADAA
CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCCHHHH
SARRLHWQAAARLCGALVGELDGAPSQPAVGLDFARIDGWLRAHLAQPLRIADLAAHCGF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCH
GMRRFHQLFCEAFGETPHRYLQRLRLDAAVMLLGDPKHSLTDIASEVGFADQSAFTHAFT
HHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHH
KRFGLAPGRWRSDRH
HHHCCCCCCCCCCCC
>Mature Secondary Structure 
TRLAAPSLSLRRYGAVQASDVHDFHQIVLGVDGAMTMTVDGVDERIDRRCAWLIPAGAR
CCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCEEEEECCCCC
HDYAGLADNSQLVLDLPPGSLAVPERLFERARTMAIDPGLTTLVGELASRIARGPLADAA
CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCCHHHH
SARRLHWQAAARLCGALVGELDGAPSQPAVGLDFARIDGWLRAHLAQPLRIADLAAHCGF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCH
GMRRFHQLFCEAFGETPHRYLQRLRLDAAVMLLGDPKHSLTDIASEVGFADQSAFTHAFT
HHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHH
KRFGLAPGRWRSDRH
HHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7503752 [H]