| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is xanB [H]
Identifier: 76819791
GI number: 76819791
Start: 1180047
End: 1181567
Strand: Direct
Name: xanB [H]
Synonym: BURPS1710b_A0919
Alternate gene names: 76819791
Gene position: 1180047-1181567 (Clockwise)
Preceding gene: 76819391
Following gene: 76819203
Centisome position: 37.09
GC content: 66.6
Gene sequence:
>1521_bases ATGAACGCCACGCTCGCCGCGGACGCCCGGTCCGCTTGCGCCGCCGACACGCGCGTCGCCGTGCAGCCCGTCGTATTGGC CGGAGGCTCGGGCACGCGCCTCTGGCCGATGTCGCGCGAGCGTCATCCGAAGCAGTTGATCAATCTGCTCGGCGACGAAT CGCTGCTGCAATCGACCGCGCGCCGCCTCGACGGCCTGTCGGGCGTTCATCCGGTATCCGAACGAATGATCGTCGTATGC GGCGAGGATCATCGCTTCACGACCGCCGAGCAATTGCGGCTCGCGGGCAAGGACGCGACGCTCGTGCTCGAGCCGCTCGG CCGCGACACCGCGCCGGCGCTGACTGTCGCCGCGCTGCGCGCAGTCGGCGGCGGCGACGACGCGGTGTTGACCGTGATGC CGGCCGATCATGCGGTGGCCGACGTCGCGCGCTTCCAGCAGGCCATCGCCGCAGCCGTGCGCTACGCCGAACAAGGAATG ATCGCGACGCTCGGCATCGTGCCGACGCACGCCGAGACGGGCTACGGCTATATCCGCGTCGGCGCGGCCGCGAACGCGGC CGACGCCGGAGCCGAGGCCGGCGTCGCGGTCAGGAAGCTCGACCGCTTCGTCGAAAAGCCGCATCTCGAGCTTGCCCGGC AATATGTCGCATCGGGCGAATATTGGTGGAACAGCGGCATCTTCATCGTGCGCGCGTCGGTCTGGCTAAAGGCGATTCGC CACTTTCAACCGGCGATTCACGATGCGTGCGCGCGCGCCGTCGCGCAAGGCAGCGAAGACGGCCCGTTCTTCCGCGTCGA TCGCGACAGCTTCGCCGCGTCGCCGTCGAACTCGATCGATTACGCGGTGATGGAGCCGCTGTCGAACCTGCCGGCGGTGT GCGAGGGCGTGGTCGTGCCGCTCGATGCCGGCTGGTCCGACGTCGGATCGTGGGACACGCTCTGGCAGATCAGCGAAAAG GACGACGAAGGCAACGTCGCACGCGGCCGTGTGTGCTTCGAGCAGGCATCGTCGACGTTCGCGCATTCGGAAGGACGCCT GATCGCCTGCGTCGGCACGCAGGATCTCGTCGTCGTCGAGACGCCCGATGCCATCCTCGTCGCCGATCGCGCGCACGTGC AGGACGTGAAGAAAATCGTCGGGCGCCTGAAGGCCGAATCAGGCACCGAAGCGTCCGATCACCGGAAAGTGCATCGCCCG TGGGGACATTACGACTCGGTCGACAGCGGCGAGCGCTTTCAGGTGAAGCGGATCGTCGTCAAGCCGGGCGCACGCCTGTC GCTGCAGATGCATCACCATCGCGCGGAGCATTGGATCGTCGTGCGCGGCACCGCGCGCATCACACGCGGCGACGAAACGT TTTTGCTCTCCGAGAACGAATCGACCTACATTCCGCTCGGCGTGTCGCATCGGCTCGAGAATCCCGGCAAGATGCCGCTC GAACTGATCGAGGTGCAATCGGGCGCGTATCTCGGGGAAGACGACATCGTCCGCTTCGAAGACAACTATGGACGACATTG A
Upstream 100 bases:
>100_bases GATAGACATTCGCCAATCGCCCGGATCCGCGCGAATCTTTTATTGTCGATTTACGTCGTGCTACAACGTCGGGACAGTCT TGTACCCGAGGAGTATCACC
Downstream 100 bases:
>100_bases ACCCGCGCCCGTGCCGAAGCGGCCGGGCGCGCCGCGCGGCGGCCGAAGCGCGCCGCCGCGCGGAACCGCTGCTCAACCGA CGCGATAGGCGTACTCGTGC
Product: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
Products: NA
Alternate protein names: Mannose-6-phosphate isomerase; Phosphohexomutase; Phosphomannose isomerase; PMI; Mannose-1-phosphate guanylyl transferase; GDP-mannose pyrophosphorylase; GMP; GMPP [H]
Number of amino acids: Translated: 506; Mature: 506
Protein sequence:
>506_residues MNATLAADARSACAADTRVAVQPVVLAGGSGTRLWPMSRERHPKQLINLLGDESLLQSTARRLDGLSGVHPVSERMIVVC GEDHRFTTAEQLRLAGKDATLVLEPLGRDTAPALTVAALRAVGGGDDAVLTVMPADHAVADVARFQQAIAAAVRYAEQGM IATLGIVPTHAETGYGYIRVGAAANAADAGAEAGVAVRKLDRFVEKPHLELARQYVASGEYWWNSGIFIVRASVWLKAIR HFQPAIHDACARAVAQGSEDGPFFRVDRDSFAASPSNSIDYAVMEPLSNLPAVCEGVVVPLDAGWSDVGSWDTLWQISEK DDEGNVARGRVCFEQASSTFAHSEGRLIACVGTQDLVVVETPDAILVADRAHVQDVKKIVGRLKAESGTEASDHRKVHRP WGHYDSVDSGERFQVKRIVVKPGARLSLQMHHHRAEHWIVVRGTARITRGDETFLLSENESTYIPLGVSHRLENPGKMPL ELIEVQSGAYLGEDDIVRFEDNYGRH
Sequences:
>Translated_506_residues MNATLAADARSACAADTRVAVQPVVLAGGSGTRLWPMSRERHPKQLINLLGDESLLQSTARRLDGLSGVHPVSERMIVVC GEDHRFTTAEQLRLAGKDATLVLEPLGRDTAPALTVAALRAVGGGDDAVLTVMPADHAVADVARFQQAIAAAVRYAEQGM IATLGIVPTHAETGYGYIRVGAAANAADAGAEAGVAVRKLDRFVEKPHLELARQYVASGEYWWNSGIFIVRASVWLKAIR HFQPAIHDACARAVAQGSEDGPFFRVDRDSFAASPSNSIDYAVMEPLSNLPAVCEGVVVPLDAGWSDVGSWDTLWQISEK DDEGNVARGRVCFEQASSTFAHSEGRLIACVGTQDLVVVETPDAILVADRAHVQDVKKIVGRLKAESGTEASDHRKVHRP WGHYDSVDSGERFQVKRIVVKPGARLSLQMHHHRAEHWIVVRGTARITRGDETFLLSENESTYIPLGVSHRLENPGKMPL ELIEVQSGAYLGEDDIVRFEDNYGRH >Mature_506_residues MNATLAADARSACAADTRVAVQPVVLAGGSGTRLWPMSRERHPKQLINLLGDESLLQSTARRLDGLSGVHPVSERMIVVC GEDHRFTTAEQLRLAGKDATLVLEPLGRDTAPALTVAALRAVGGGDDAVLTVMPADHAVADVARFQQAIAAAVRYAEQGM IATLGIVPTHAETGYGYIRVGAAANAADAGAEAGVAVRKLDRFVEKPHLELARQYVASGEYWWNSGIFIVRASVWLKAIR HFQPAIHDACARAVAQGSEDGPFFRVDRDSFAASPSNSIDYAVMEPLSNLPAVCEGVVVPLDAGWSDVGSWDTLWQISEK DDEGNVARGRVCFEQASSTFAHSEGRLIACVGTQDLVVVETPDAILVADRAHVQDVKKIVGRLKAESGTEASDHRKVHRP WGHYDSVDSGERFQVKRIVVKPGARLSLQMHHHRAEHWIVVRGTARITRGDETFLLSENESTYIPLGVSHRLENPGKMPL ELIEVQSGAYLGEDDIVRFEDNYGRH
Specific function: Involved in xanthan production [H]
COG id: COG0836
COG function: function code M; Mannose-1-phosphate guanylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788362, Length=486, Percent_Identity=52.6748971193416, Blast_Score=490, Evalue=1e-140,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR006375 - InterPro: IPR001538 - InterPro: IPR005835 - InterPro: IPR014710 [H]
Pfam domain/function: PF01050 MannoseP_isomer; PF00483 NTP_transferase [H]
EC number: =5.3.1.8; =2.7.7.13 [H]
Molecular weight: Translated: 54899; Mature: 54899
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNATLAADARSACAADTRVAVQPVVLAGGSGTRLWPMSRERHPKQLINLLGDESLLQSTA CCCCCCCCCHHHHCCCCEEEEEEEEEECCCCCEECCCCCCCCHHHHHHHHCCHHHHHHHH RRLDGLSGVHPVSERMIVVCGEDHRFTTAEQLRLAGKDATLVLEPLGRDTAPALTVAALR HHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHH AVGGGDDAVLTVMPADHAVADVARFQQAIAAAVRYAEQGMIATLGIVPTHAETGYGYIRV HCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEE GAAANAADAGAEAGVAVRKLDRFVEKPHLELARQYVASGEYWWNSGIFIVRASVWLKAIR CCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCEEECCCEEEEEHHHHHHHHH HFQPAIHDACARAVAQGSEDGPFFRVDRDSFAASPSNSIDYAVMEPLSNLPAVCEGVVVP HHHHHHHHHHHHHHHCCCCCCCEEEEECHHCCCCCCCCCCHHHHHHHHCCCHHHCCEEEE LDAGWSDVGSWDTLWQISEKDDEGNVARGRVCFEQASSTFAHSEGRLIACVGTQDLVVVE ECCCCCCCCCCCCEEEEECCCCCCCEEHHHHHHHHHHCHHCCCCCCEEEEECCCCEEEEE TPDAILVADRAHVQDVKKIVGRLKAESGTEASDHRKVHRPWGHYDSVDSGERFQVKRIVV CCCEEEEECHHHHHHHHHHHHHHCCCCCCCCHHCCHHCCCCCCCCCCCCCCCEEEEEEEE KPGARLSLQMHHHRAEHWIVVRGTARITRGDETFLLSENESTYIPLGVSHRLENPGKMPL CCCCEEEEEEECCCCCEEEEEECCEEEECCCCEEEEECCCCEEEEECHHHCCCCCCCCCE ELIEVQSGAYLGEDDIVRFEDNYGRH EEEEECCCCEECCCCEEEECCCCCCC >Mature Secondary Structure MNATLAADARSACAADTRVAVQPVVLAGGSGTRLWPMSRERHPKQLINLLGDESLLQSTA CCCCCCCCCHHHHCCCCEEEEEEEEEECCCCCEECCCCCCCCHHHHHHHHCCHHHHHHHH RRLDGLSGVHPVSERMIVVCGEDHRFTTAEQLRLAGKDATLVLEPLGRDTAPALTVAALR HHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHH AVGGGDDAVLTVMPADHAVADVARFQQAIAAAVRYAEQGMIATLGIVPTHAETGYGYIRV HCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEE GAAANAADAGAEAGVAVRKLDRFVEKPHLELARQYVASGEYWWNSGIFIVRASVWLKAIR CCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCEEECCCEEEEEHHHHHHHHH HFQPAIHDACARAVAQGSEDGPFFRVDRDSFAASPSNSIDYAVMEPLSNLPAVCEGVVVP HHHHHHHHHHHHHHHCCCCCCCEEEEECHHCCCCCCCCCCHHHHHHHHCCCHHHCCEEEE LDAGWSDVGSWDTLWQISEKDDEGNVARGRVCFEQASSTFAHSEGRLIACVGTQDLVVVE ECCCCCCCCCCCCEEEEECCCCCCCEEHHHHHHHHHHCHHCCCCCCEEEEECCCCEEEEE TPDAILVADRAHVQDVKKIVGRLKAESGTEASDHRKVHRPWGHYDSVDSGERFQVKRIVV CCCEEEEECHHHHHHHHHHHHHHCCCCCCCCHHCCHHCCCCCCCCCCCCCCCEEEEEEEE KPGARLSLQMHHHRAEHWIVVRGTARITRGDETFLLSENESTYIPLGVSHRLENPGKMPL CCCCEEEEEEECCCCCEEEEEECCEEEECCCCEEEEECCCCEEEEECHHHCCCCCCCCCE ELIEVQSGAYLGEDDIVRFEDNYGRH EEEEECCCCEECCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1370280; 11589581 [H]