| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is fbp [H]
Identifier: 76817652
GI number: 76817652
Start: 1165419
End: 1165760
Strand: Direct
Name: fbp [H]
Synonym: BURPS1710b_A0907
Alternate gene names: 76817652
Gene position: 1165419-1165760 (Clockwise)
Preceding gene: 76817986
Following gene: 76819391
Centisome position: 36.63
GC content: 66.08
Gene sequence:
>342_bases ATGACAGTCGTCACCACCGAATCGGGCCTCAAATACGAAGACCTGACCGAAGGCTCGGGCGCCGAGGCGCGCGCGGGCCA GACGGTGAGCGTGCACTACACGGGCTGGCTCACCGACGGCCAGAAGTTCGATTCGAGCAAGGATCGCAATGATCCGTTCG CGTTCGTGCTCGGCGGCGGCATGGTCATCAAGGGGTGGGACGAAGGCGTGCAAGGGATGAAGGTGGGCGGCGTGCGCCGT CTGACGATCCCGCCGCAACTCGGCTACGGCGCGCGCGGCGCGGGCGGCGTGATTCCGCCCAATGCGACGCTCGTGTTCGA AGTCGAACTGCTCGACGTCTGA
Upstream 100 bases:
>100_bases GCATCGGCCGACGCCGCGAAACCGGCGCGCCGGGAAATCCGGTCGAGATCGCGCGGCTCCCCTACAATAGCGGGTCATTT CGATCCTTCAGGAGCATTTC
Downstream 100 bases:
>100_bases GCCCGGCGCCGCCCCGCCGCCCGTCGCCCCGTCGCGCGCGTTCACCGGCCGCCCGCCCGATCATGACCCGCCTCGCCGCC CCGAGCCTGTCGCTGCGCCG
Product: peptidyl-prolyl cis-trans isomerase
Products: NA
Alternate protein names: Peptidyl-prolyl cis-trans isomerase; PPIase; Rotamase [H]
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MTVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRR LTIPPQLGYGARGAGGVIPPNATLVFEVELLDV
Sequences:
>Translated_113_residues MTVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRR LTIPPQLGYGARGAGGVIPPNATLVFEVELLDV >Mature_112_residues TVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRL TIPPQLGYGARGAGGVIPPNATLVFEVELLDV
Specific function: PPIases accelerate the folding of proteins [H]
COG id: COG0545
COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerases 1
Gene ontology:
Cell location: Cytoplasm And Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PPIase FKBP-type domain [H]
Homologues:
Organism=Homo sapiens, GI17149836, Length=106, Percent_Identity=55.6603773584906, Blast_Score=118, Evalue=1e-27, Organism=Homo sapiens, GI4503725, Length=106, Percent_Identity=55.6603773584906, Blast_Score=118, Evalue=1e-27, Organism=Homo sapiens, GI4758380, Length=106, Percent_Identity=51.8867924528302, Blast_Score=112, Evalue=7e-26, Organism=Homo sapiens, GI4503729, Length=97, Percent_Identity=57.7319587628866, Blast_Score=110, Evalue=2e-25, Organism=Homo sapiens, GI206725530, Length=92, Percent_Identity=57.6086956521739, Blast_Score=106, Evalue=3e-24, Organism=Homo sapiens, GI17149844, Length=92, Percent_Identity=57.6086956521739, Blast_Score=106, Evalue=3e-24, Organism=Homo sapiens, GI17149842, Length=92, Percent_Identity=57.6086956521739, Blast_Score=106, Evalue=3e-24, Organism=Homo sapiens, GI224809331, Length=87, Percent_Identity=56.3218390804598, Blast_Score=102, Evalue=8e-23, Organism=Homo sapiens, GI224809329, Length=96, Percent_Identity=54.1666666666667, Blast_Score=99, Evalue=5e-22, Organism=Homo sapiens, GI224809327, Length=96, Percent_Identity=54.1666666666667, Blast_Score=99, Evalue=5e-22, Organism=Homo sapiens, GI4758384, Length=96, Percent_Identity=54.1666666666667, Blast_Score=99, Evalue=5e-22, Organism=Homo sapiens, GI192448443, Length=92, Percent_Identity=54.3478260869565, Blast_Score=99, Evalue=6e-22, Organism=Homo sapiens, GI33469985, Length=91, Percent_Identity=48.3516483516484, Blast_Score=92, Evalue=1e-19, Organism=Homo sapiens, GI8923659, Length=95, Percent_Identity=45.2631578947368, Blast_Score=84, Evalue=2e-17, Organism=Homo sapiens, GI206725547, Length=100, Percent_Identity=44, Blast_Score=83, Evalue=4e-17, Organism=Homo sapiens, GI31317231, Length=101, Percent_Identity=44.5544554455446, Blast_Score=81, Evalue=2e-16, Organism=Homo sapiens, GI150010552, Length=103, Percent_Identity=40.7766990291262, Blast_Score=78, Evalue=1e-15, Organism=Homo sapiens, GI4503727, Length=98, Percent_Identity=43.8775510204082, Blast_Score=77, Evalue=2e-15, Organism=Homo sapiens, GI7706131, Length=95, Percent_Identity=40, Blast_Score=71, Evalue=2e-13, Organism=Homo sapiens, GI17149839, Length=79, Percent_Identity=45.5696202531646, Blast_Score=69, Evalue=8e-13, Organism=Homo sapiens, GI206725544, Length=113, Percent_Identity=32.7433628318584, Blast_Score=65, Evalue=9e-12, Organism=Homo sapiens, GI146229346, Length=113, Percent_Identity=32.7433628318584, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI87082390, Length=111, Percent_Identity=51.3513513513513, Blast_Score=102, Evalue=8e-24, Organism=Escherichia coli, GI1789745, Length=111, Percent_Identity=49.5495495495495, Blast_Score=94, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17540882, Length=97, Percent_Identity=53.6082474226804, Blast_Score=108, Evalue=6e-25, Organism=Caenorhabditis elegans, GI71993519, Length=106, Percent_Identity=53.7735849056604, Blast_Score=105, Evalue=6e-24, Organism=Caenorhabditis elegans, GI17561782, Length=87, Percent_Identity=56.3218390804598, Blast_Score=93, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17561778, Length=94, Percent_Identity=45.7446808510638, Blast_Score=82, Evalue=7e-17, Organism=Caenorhabditis elegans, GI71993555, Length=82, Percent_Identity=46.3414634146341, Blast_Score=76, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17506169, Length=109, Percent_Identity=37.6146788990826, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17506167, Length=109, Percent_Identity=37.6146788990826, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17561780, Length=108, Percent_Identity=37.037037037037, Blast_Score=67, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6324194, Length=108, Percent_Identity=52.7777777777778, Blast_Score=109, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6320727, Length=99, Percent_Identity=57.5757575757576, Blast_Score=105, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6323566, Length=107, Percent_Identity=46.7289719626168, Blast_Score=87, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6323482, Length=107, Percent_Identity=44.8598130841121, Blast_Score=86, Evalue=1e-18, Organism=Drosophila melanogaster, GI281363946, Length=121, Percent_Identity=50.4132231404959, Blast_Score=124, Evalue=1e-29, Organism=Drosophila melanogaster, GI17352457, Length=121, Percent_Identity=50.4132231404959, Blast_Score=124, Evalue=1e-29, Organism=Drosophila melanogaster, GI24655568, Length=106, Percent_Identity=53.7735849056604, Blast_Score=114, Evalue=1e-26, Organism=Drosophila melanogaster, GI24647110, Length=109, Percent_Identity=55.045871559633, Blast_Score=109, Evalue=3e-25, Organism=Drosophila melanogaster, GI24583150, Length=109, Percent_Identity=51.3761467889908, Blast_Score=106, Evalue=2e-24, Organism=Drosophila melanogaster, GI21356629, Length=98, Percent_Identity=57.1428571428571, Blast_Score=96, Evalue=6e-21,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001179 [H]
Pfam domain/function: PF00254 FKBP_C [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 11931; Mature: 11799
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS50059 FKBP_PPIASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGG CEEEECCCCCEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEECC MVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV EEEECCCCCCCCEEECCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure TVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGG EEEECCCCCEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEECC MVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV EEEECCCCCCCCEEECCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10761919 [H]