| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is proP7 [H]
Identifier: 76818468
GI number: 76818468
Start: 315069
End: 316349
Strand: Direct
Name: proP7 [H]
Synonym: BURPS1710b_A0209
Alternate gene names: 76818468
Gene position: 315069-316349 (Clockwise)
Preceding gene: 76817776
Following gene: 76818927
Centisome position: 9.9
GC content: 45.28
Gene sequence:
>1281_bases GTGCGATCAAAATCTGGACAAACTCTAAAGATTGCGCTGACTGCAAATCTTTTCGAGTGGTATGAGTTCTCACTCACGGC GTTCATGGCGCTAGAGATAGGTAGGCTTTTCTTCCCCGATACAAACGAGAAAACGGCCTTAATTTCAAGCTTCTCAGTGT TCGCCAGCAGCTATCTTGCGCGACCGATCGGCAGCATACTTTTTGGCATTTTAGGAGCTCGATACGGAACAGGGGCTTCG TTAAAAATCAGCATGATCGGAATGGCTGTGCCCGCCTCGCTAATTGCAGTTCTCCCTACATATCAAACAGCCGGCCATTT CTCAACTTTCTTGTTGCTAGCTCTGAAAATAACTCAGGGCTTCTGCGCAGGAGGAGAAATGCCATTAAGCGGATATTTCG TATCGCTCAATGCAGACAGGACGAATCGCGGCCTCTATTGCGCCTTAACAGTAGCGAGCGGATTTATCGGCATGCTATTA GCTTCCGCGGCTGTATTTTTGCTTCCGCATATAAGATATGCCCTCGACCACCTAGCTAGCCCTGAAAATTACGCCTACCT GAACGAGCCGTGGCGCTGGCCGTTTTTTCTTTGCATGCCATTATCTATTTCAATATATTTATTACGATCCGCAATAAACA AGAGTGAAGTGAAGGTAGATTCCGGAAAATTGAGGGCAAAGCCCACTTTTCCGCTACTTCAGTCGCTCGCCGTCGTCGCA TTTGCAGAAATAGTTATATATATAATTTTTGTATGGATGCCAAATTATTTGCACGTCTACCTTGGGAAGCAAAGTTTTGA CGCGAGACTTTCAAATATTTCATCCCTGATAATATTCTCGATATCGATGGCTTGTGCCGGCTATGCTGAGCGTTATTTTT GCGCCAGAAATATCGCACTATTCGGAACCATAGCGACGGCAATCTCCGTCTATCCATCATTTATTATAATGCAATACGGG GGCATATTCGCACTATTGTTTTCCCAGGCCATCCTCGCAATATCGGCTGGATGTGTCGTTGGAGTAATTTTCGTCGTGTT GCCTGATCTATTCAAGAAAAATTGGGGGAGCTTGGGAATGGTCGTCACCTACTCATTTGCCACCGCTATTTTTGGTGGAA CCGCCCCTGTTTTCTGCGCCTACCTGATCGAATTAACTCATTTTATTGCCGCACCTGCCATTTATATATTCTTAATGGGA ATGTTGGCTGCAGCCGCCATCTACAAAATTTATCCACCAAGTAAAACGAAATTTAGATATCGAGCACCGAATTCCGTTTG A
Upstream 100 bases:
>100_bases TCTCAGATAGAACGGTTGAATGTCATTGCGCAGCTCTGCGCAGCAAGATAATTGATGGAAACCTGCCATATATCCTGTCG CTTGTAAAAGGAAGCTTCTC
Downstream 100 bases:
>100_bases TTGAAAGCATCATTCATCGTCACTTAAAAATTATTGTGAATAAATCGGCTAATTTGCCATCGGAGTATCTGATCACGCCG GAACCTCCGGGTGACGAGGC
Product: putative sugar transporter
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: Proline porter II; PPII [H]
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MRSKSGQTLKIALTANLFEWYEFSLTAFMALEIGRLFFPDTNEKTALISSFSVFASSYLARPIGSILFGILGARYGTGAS LKISMIGMAVPASLIAVLPTYQTAGHFSTFLLLALKITQGFCAGGEMPLSGYFVSLNADRTNRGLYCALTVASGFIGMLL ASAAVFLLPHIRYALDHLASPENYAYLNEPWRWPFFLCMPLSISIYLLRSAINKSEVKVDSGKLRAKPTFPLLQSLAVVA FAEIVIYIIFVWMPNYLHVYLGKQSFDARLSNISSLIIFSISMACAGYAERYFCARNIALFGTIATAISVYPSFIIMQYG GIFALLFSQAILAISAGCVVGVIFVVLPDLFKKNWGSLGMVVTYSFATAIFGGTAPVFCAYLIELTHFIAAPAIYIFLMG MLAAAAIYKIYPPSKTKFRYRAPNSV
Sequences:
>Translated_426_residues MRSKSGQTLKIALTANLFEWYEFSLTAFMALEIGRLFFPDTNEKTALISSFSVFASSYLARPIGSILFGILGARYGTGAS LKISMIGMAVPASLIAVLPTYQTAGHFSTFLLLALKITQGFCAGGEMPLSGYFVSLNADRTNRGLYCALTVASGFIGMLL ASAAVFLLPHIRYALDHLASPENYAYLNEPWRWPFFLCMPLSISIYLLRSAINKSEVKVDSGKLRAKPTFPLLQSLAVVA FAEIVIYIIFVWMPNYLHVYLGKQSFDARLSNISSLIIFSISMACAGYAERYFCARNIALFGTIATAISVYPSFIIMQYG GIFALLFSQAILAISAGCVVGVIFVVLPDLFKKNWGSLGMVVTYSFATAIFGGTAPVFCAYLIELTHFIAAPAIYIFLMG MLAAAAIYKIYPPSKTKFRYRAPNSV >Mature_426_residues MRSKSGQTLKIALTANLFEWYEFSLTAFMALEIGRLFFPDTNEKTALISSFSVFASSYLARPIGSILFGILGARYGTGAS LKISMIGMAVPASLIAVLPTYQTAGHFSTFLLLALKITQGFCAGGEMPLSGYFVSLNADRTNRGLYCALTVASGFIGMLL ASAAVFLLPHIRYALDHLASPENYAYLNEPWRWPFFLCMPLSISIYLLRSAINKSEVKVDSGKLRAKPTFPLLQSLAVVA FAEIVIYIIFVWMPNYLHVYLGKQSFDARLSNISSLIIFSISMACAGYAERYFCARNIALFGTIATAISVYPSFIIMQYG GIFALLFSQAILAISAGCVVGVIFVVLPDLFKKNWGSLGMVVTYSFATAIFGGTAPVFCAYLIELTHFIAAPAIYIFLMG MLAAAAIYKIYPPSKTKFRYRAPNSV
Specific function: Proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in th
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=419, Percent_Identity=25.2983293556086, Blast_Score=141, Evalue=6e-35, Organism=Escherichia coli, GI1788292, Length=384, Percent_Identity=25.2604166666667, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1788942, Length=382, Percent_Identity=27.4869109947644, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI1789941, Length=216, Percent_Identity=30.0925925925926, Blast_Score=72, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR015041 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF08946 Osmo_CC; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 46622; Mature: 46622
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSKSGQTLKIALTANLFEWYEFSLTAFMALEIGRLFFPDTNEKTALISSFSVFASSYLA CCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH RPIGSILFGILGARYGTGASLKISMIGMAVPASLIAVLPTYQTAGHFSTFLLLALKITQG HHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC FCAGGEMPLSGYFVSLNADRTNRGLYCALTVASGFIGMLLASAAVFLLPHIRYALDHLAS CCCCCCCCCCCEEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PENYAYLNEPWRWPFFLCMPLSISIYLLRSAINKSEVKVDSGKLRAKPTFPLLQSLAVVA CCCCEECCCCCCCCEEEEHHHHHHHHHHHHHCCCCCEEECCCCEECCCCHHHHHHHHHHH FAEIVIYIIFVWMPNYLHVYLGKQSFDARLSNISSLIIFSISMACAGYAERYFCARNIAL HHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGTIATAISVYPSFIIMQYGGIFALLFSQAILAISAGCVVGVIFVVLPDLFKKNWGSLGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH VVTYSFATAIFGGTAPVFCAYLIELTHFIAAPAIYIFLMGMLAAAAIYKIYPPSKTKFRY HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEE RAPNSV CCCCCC >Mature Secondary Structure MRSKSGQTLKIALTANLFEWYEFSLTAFMALEIGRLFFPDTNEKTALISSFSVFASSYLA CCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH RPIGSILFGILGARYGTGASLKISMIGMAVPASLIAVLPTYQTAGHFSTFLLLALKITQG HHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC FCAGGEMPLSGYFVSLNADRTNRGLYCALTVASGFIGMLLASAAVFLLPHIRYALDHLAS CCCCCCCCCCCEEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PENYAYLNEPWRWPFFLCMPLSISIYLLRSAINKSEVKVDSGKLRAKPTFPLLQSLAVVA CCCCEECCCCCCCCEEEEHHHHHHHHHHHHHCCCCCEEECCCCEECCCCHHHHHHHHHHH FAEIVIYIIFVWMPNYLHVYLGKQSFDARLSNISSLIIFSISMACAGYAERYFCARNIAL HHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGTIATAISVYPSFIIMQYGGIFALLFSQAILAISAGCVVGVIFVVLPDLFKKNWGSLGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH VVTYSFATAIFGGTAPVFCAYLIELTHFIAAPAIYIFLMGMLAAAAIYKIYPPSKTKFRY HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEE RAPNSV CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]