| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is 76817776
Identifier: 76817776
GI number: 76817776
Start: 308013
End: 310196
Strand: Direct
Name: 76817776
Synonym: BURPS1710b_A0206
Alternate gene names: NA
Gene position: 308013-310196 (Clockwise)
Preceding gene: 76819202
Following gene: 76818468
Centisome position: 9.68
GC content: 64.29
Gene sequence:
>2184_bases GTGTTCGTCCAAGCGCTCAAAGTTCTTGCATTTCTGGATATTGCGATACACGTCCGGCGTCATCTTCCAATCCGCCATCA AAAGCAACAACTGCCGCCAGTCCGGATCATCCAGCGTCACCGCCTGACCGATCGCCACATCCATCGCCGTGACCCAGCGA TGGTTCTCCGAACTGAGCAGTACGCCCGAATGATAGTTGTTCGCTTCCAGTTGATCGGCATCGGTACGCATGCGCTTGCG AACCTCGTCCGGCGTCTCCTCGCGCTGGATCACGTACGTCTGATACCGTCCGCCCGTGGCGGCCGCCGACAGCATCGAGC CGAGCGACCGGCTCGGCACGATGCGCCAGTTATGCGACTGCTCGTCGACCGGACGGCCGCGATTGAACGCCTGCTTGTGC GGCTCGATGCCGGCGCCCGGATCGTCCGTCGTCGCGACGTCTTTCCATTTGAACTTCGCGTACTGGTTGCCGAGCGCGAC GTTTTTCGTCACGTCGTCCGGACGCATCAACCCGGCGACATCGGCGTGCCCGGGCACCTGTCCGCCCTTCCGAACCTCGC CCCCGTACAGATCGGGCTCGTACGCCGGTTTCAGTTGCTCGCCGTTGATGAAGCGAATGTCGTTGCGCTTGAACGATGCC TGCAGCGCCATGTTCTTGCCGGATTCGACCAAGGTGCCAAGCATCGTGCCGTCCGTGTCGGGGCCCGGCGTCAATCGCTG AAACGGGTCGCGAACCGGCACGCGCGCGGGCGGCGTGCCGACGGCGACCTTCGAGCGCTTCCCCCTGCCGTCCTGGTCGC GCTCGAGCCGCGTCCACATGCGCTGAAAGAAGCGCTTCGGCTCAAGCACCGTCATCGCGGGCATCGTTTTGCCCCGGCTG GCCGCCGCGCCATCGGCCGGCACCTCGTCGGGCACGCCGAACGTGCCGATCCCCCGCACCTTGTCGAGGCCGACCACGGT ATCTTCCGGGCAAAAGTACAGATAGACCTTGCCGCGGTTGTCGCGCTCGTCGAACGTGATCCAGTGCTTGCCGCCCTTGT CCGGCCGCTTTCCCTGCGTCTTGCTCCAGTTCTGTCCGGCCCGGCCGCACGAATGGGCCGAATCGATCATCAGTTCGGCC AGCTCCGGAATCGTATGCGGCTCGCTCGTCACCGCGTTGACGATGTCGACCAGCGTCTTGAGCTTCGCGTGCCCGGTTTG CTGGCTGCCGTCCTGGGTGAACTGCAGGCTGTACGGCGTATCGACCATGATGATGCAATCGACGCAGCGCTGCCCTTGCT GCCTGAGCATCGCCTGCGCGAGCAGCGTGATGATCGTGCCCTGGCTGTGCCCCATCACCGTGATCGTTTCGTGCTGAGGG TCCATTCCATGTTCGAGCGCGAGCGCGGAGGGCTGAATGGTCCGAATGGTCTTGATGAGATTCGCCAGGCGAGCCGCGGC CAGCACGAAGTAACGGCGCTCGGGCGACTTGCCGGCGAAGATCGTATTGCCGGCCAGCGCGTTTTGCATGACCGTGCGCT CGAGCTTGTCCGGTTCGAAGCCCGGGCTGTACATCTGCGGGATGTTGTTCGTCGCGTTGGCGAAAAACCCGCCGCCCTTG CCGAAATGGGCGTCGAGCCGGTTGCCGTGGATGTCCTGATACTGGCCGCGCGTCATCAGGTTGCCGTCGCTGTCCGCCAC GCGGCTCTTGACCTCGCCCGGATGGCTGATCTTCGCGATCTCGTTGTCGGACGCCCGATAGCCCCAGTAGAACGGCAGGA ACATGCTGTGAGTGCCGCCGGCCTCCGCACGTTGATACAGATACATGTCCGGATCGCCCAGCACTTCCGCATACCGAACG CTATCGCCCTCGGCTTTCGCCGCCGACGCAGCCGCATACCGCCTGCCATACTCCCCCGGCCGCAGATCGCTTCGCGACAA GCGCTCATTGAGCCCCTGGCACAGCCCGCGCTCCACGGTGGCATAAGCCGCCCCGGGATCGTTGACGCCGTGGATGAAGA TCACCACGCCCGGCAGATCGCGCGGAATCGGCACGGGCCGGTCGCCCGGCCGATTCGCCATCGTCACGCCCGCCCCGCGG GCGGCGGTGAAACACTGATCGTTGATTCCGTTCATCGTTCGCCCGGGTTCAGAGCTTCGGCTTCAGATAGTCGATCTTCG CGATACGCATCGCGTCGTCCTTGA
Upstream 100 bases:
>100_bases CGCTGGTCACGAGCGGTGGCATGGTGAGAGGTACATACTTCTCGTCGGGAAATCGGCCCGTCTTGTAGTAGTCGACACAC GCTTTCACGAATTCGCGCGT
Downstream 100 bases:
>100_bases CCAGATCCGTCAGGCCGCTCGCGTCGGTCTTGCCTTCGATGACGCGCCCGTCGTCCAGCGTGATCCGGAACCGCTTGTTC GCCGCCGCCTGCAAATCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 727; Mature: 727
Protein sequence:
>727_residues MFVQALKVLAFLDIAIHVRRHLPIRHQKQQLPPVRIIQRHRLTDRHIHRRDPAMVLRTEQYARMIVVRFQLIGIGTHALA NLVRRLLALDHVRLIPSARGGRRQHRAERPARHDAPVMRLLVDRTAAIERLLVRLDAGARIVRRRDVFPFELRVLVAERD VFRHVVRTHQPGDIGVPGHLSALPNLAPVQIGLVRRFQLLAVDEANVVALERCLQRHVLAGFDQGAKHRAVRVGARRQSL KRVANRHARGRRADGDLRALPPAVLVALEPRPHALKEALRLKHRHRGHRFAPAGRRAIGRHLVGHAERADPPHLVEADHG IFRAKVQIDLAAVVALVERDPVLAALVRPLSLRLAPVLSGPAARMGRIDHQFGQLRNRMRLARHRVDDVDQRLELRVPGL LAAVLGELQAVRRIDHDDAIDAALPLLPEHRLREQRDDRALAVPHHRDRFVLRVHSMFERERGGLNGPNGLDEIRQASRG QHEVTALGRLAGEDRIAGQRVLHDRALELVRFEARAVHLRDVVRRVGEKPAALAEMGVEPVAVDVLILAARHQVAVAVRH AALDLARMADLRDLVVGRPIAPVERQEHAVSAAGLRTLIQIHVRIAQHFRIPNAIALGFRRRRSRIPPAILPRPQIASRQ ALIEPLAQPALHGGISRPGIVDAVDEDHHARQIARNRHGPVARPIRHRHARPAGGGETLIVDSVHRSPGFRASASDSRSS RYASRRP
Sequences:
>Translated_727_residues MFVQALKVLAFLDIAIHVRRHLPIRHQKQQLPPVRIIQRHRLTDRHIHRRDPAMVLRTEQYARMIVVRFQLIGIGTHALA NLVRRLLALDHVRLIPSARGGRRQHRAERPARHDAPVMRLLVDRTAAIERLLVRLDAGARIVRRRDVFPFELRVLVAERD VFRHVVRTHQPGDIGVPGHLSALPNLAPVQIGLVRRFQLLAVDEANVVALERCLQRHVLAGFDQGAKHRAVRVGARRQSL KRVANRHARGRRADGDLRALPPAVLVALEPRPHALKEALRLKHRHRGHRFAPAGRRAIGRHLVGHAERADPPHLVEADHG IFRAKVQIDLAAVVALVERDPVLAALVRPLSLRLAPVLSGPAARMGRIDHQFGQLRNRMRLARHRVDDVDQRLELRVPGL LAAVLGELQAVRRIDHDDAIDAALPLLPEHRLREQRDDRALAVPHHRDRFVLRVHSMFERERGGLNGPNGLDEIRQASRG QHEVTALGRLAGEDRIAGQRVLHDRALELVRFEARAVHLRDVVRRVGEKPAALAEMGVEPVAVDVLILAARHQVAVAVRH AALDLARMADLRDLVVGRPIAPVERQEHAVSAAGLRTLIQIHVRIAQHFRIPNAIALGFRRRRSRIPPAILPRPQIASRQ ALIEPLAQPALHGGISRPGIVDAVDEDHHARQIARNRHGPVARPIRHRHARPAGGGETLIVDSVHRSPGFRASASDSRSS RYASRRP >Mature_727_residues MFVQALKVLAFLDIAIHVRRHLPIRHQKQQLPPVRIIQRHRLTDRHIHRRDPAMVLRTEQYARMIVVRFQLIGIGTHALA NLVRRLLALDHVRLIPSARGGRRQHRAERPARHDAPVMRLLVDRTAAIERLLVRLDAGARIVRRRDVFPFELRVLVAERD VFRHVVRTHQPGDIGVPGHLSALPNLAPVQIGLVRRFQLLAVDEANVVALERCLQRHVLAGFDQGAKHRAVRVGARRQSL KRVANRHARGRRADGDLRALPPAVLVALEPRPHALKEALRLKHRHRGHRFAPAGRRAIGRHLVGHAERADPPHLVEADHG IFRAKVQIDLAAVVALVERDPVLAALVRPLSLRLAPVLSGPAARMGRIDHQFGQLRNRMRLARHRVDDVDQRLELRVPGL LAAVLGELQAVRRIDHDDAIDAALPLLPEHRLREQRDDRALAVPHHRDRFVLRVHSMFERERGGLNGPNGLDEIRQASRG QHEVTALGRLAGEDRIAGQRVLHDRALELVRFEARAVHLRDVVRRVGEKPAALAEMGVEPVAVDVLILAARHQVAVAVRH AALDLARMADLRDLVVGRPIAPVERQEHAVSAAGLRTLIQIHVRIAQHFRIPNAIALGFRRRRSRIPPAILPRPQIASRQ ALIEPLAQPALHGGISRPGIVDAVDEDHHARQIARNRHGPVARPIRHRHARPAGGGETLIVDSVHRSPGFRASASDSRSS RYASRRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81623; Mature: 81623
Theoretical pI: Translated: 12.26; Mature: 12.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVQALKVLAFLDIAIHVRRHLPIRHQKQQLPPVRIIQRHRLTDRHIHRRDPAMVLRTEQ CHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHCCHHHHHHCCCCHHEEEHHH YARMIVVRFQLIGIGTHALANLVRRLLALDHVRLIPSARGGRRQHRAERPARHDAPVMRL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHH LVDRTAAIERLLVRLDAGARIVRRRDVFPFELRVLVAERDVFRHVVRTHQPGDIGVPGHL HHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH SALPNLAPVQIGLVRRFQLLAVDEANVVALERCLQRHVLAGFDQGAKHRAVRVGARRQSL HHCCCCCHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH KRVANRHARGRRADGDLRALPPAVLVALEPRPHALKEALRLKHRHRGHRFAPAGRRAIGR HHHHHHHCCCCCCCCCCHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH HLVGHAERADPPHLVEADHGIFRAKVQIDLAAVVALVERDPVLAALVRPLSLRLAPVLSG HHHCCCCCCCCCCEEECCCCEEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC PAARMGRIDHQFGQLRNRMRLARHRVDDVDQRLELRVPGLLAAVLGELQAVRRIDHDDAI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHH DAALPLLPEHRLREQRDDRALAVPHHRDRFVLRVHSMFERERGGLNGPNGLDEIRQASRG HHHHCCCCHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC QHEVTALGRLAGEDRIAGQRVLHDRALELVRFEARAVHLRDVVRRVGEKPAALAEMGVEP CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCH VAVDVLILAARHQVAVAVRHAALDLARMADLRDLVVGRPIAPVERQEHAVSAAGLRTLIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH IHVRIAQHFRIPNAIALGFRRRRSRIPPAILPRPQIASRQALIEPLAQPALHGGISRPGI HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC VDAVDEDHHARQIARNRHGPVARPIRHRHARPAGGGETLIVDSVHRSPGFRASASDSRSS CCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHH RYASRRP CCCCCCC >Mature Secondary Structure MFVQALKVLAFLDIAIHVRRHLPIRHQKQQLPPVRIIQRHRLTDRHIHRRDPAMVLRTEQ CHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHCCHHHHHHCCCCHHEEEHHH YARMIVVRFQLIGIGTHALANLVRRLLALDHVRLIPSARGGRRQHRAERPARHDAPVMRL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHH LVDRTAAIERLLVRLDAGARIVRRRDVFPFELRVLVAERDVFRHVVRTHQPGDIGVPGHL HHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH SALPNLAPVQIGLVRRFQLLAVDEANVVALERCLQRHVLAGFDQGAKHRAVRVGARRQSL HHCCCCCHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH KRVANRHARGRRADGDLRALPPAVLVALEPRPHALKEALRLKHRHRGHRFAPAGRRAIGR HHHHHHHCCCCCCCCCCHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH HLVGHAERADPPHLVEADHGIFRAKVQIDLAAVVALVERDPVLAALVRPLSLRLAPVLSG HHHCCCCCCCCCCEEECCCCEEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC PAARMGRIDHQFGQLRNRMRLARHRVDDVDQRLELRVPGLLAAVLGELQAVRRIDHDDAI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHH DAALPLLPEHRLREQRDDRALAVPHHRDRFVLRVHSMFERERGGLNGPNGLDEIRQASRG HHHHCCCCHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC QHEVTALGRLAGEDRIAGQRVLHDRALELVRFEARAVHLRDVVRRVGEKPAALAEMGVEP CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCH VAVDVLILAARHQVAVAVRHAALDLARMADLRDLVVGRPIAPVERQEHAVSAAGLRTLIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH IHVRIAQHFRIPNAIALGFRRRRSRIPPAILPRPQIASRQALIEPLAQPALHGGISRPGI HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC VDAVDEDHHARQIARNRHGPVARPIRHRHARPAGGGETLIVDSVHRSPGFRASASDSRSS CCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHH RYASRRP CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA