| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is spkF [H]
Identifier: 75909789
GI number: 75909789
Start: 4463339
End: 4464976
Strand: Direct
Name: spkF [H]
Synonym: Ava_3584
Alternate gene names: 75909789
Gene position: 4463339-4464976 (Clockwise)
Preceding gene: 75909788
Following gene: 75909790
Centisome position: 70.12
GC content: 43.59
Gene sequence:
>1638_bases GTGCTACAGTTGTTAGATCGTTATGTGCCACTACAGACCTTGGGTGCGGGGGGTTTTGCACAAATTTATACCGTTTGGGA TGAAAAGACCCAAACGGAAAAAGTGCTAAAGGTGTTGATAGAAGATTCCCCAAAGGCGTTGGAATTATTTACGCAAGAGG CAGAAGTTTTAGTCAGGTTACGCCATCCTGGTGTCCCCAAAGTTGAGGCTGATGGTCATTTTCAAGTTAATTTATCCAAT CCCAAGCCGCGCCAACTACCTTGTTTGGTAATGGAAAAAATTAACGGGCCGACTTTGGAGGAAATGTTGAACAAATATCC CCAGGGATGCCCAGAAAATTTGGTATTAAACTGGTTAACTCAAGGGATCAAGATTTTACAAGAATTACATAAGCATCAAA TCATACATCGTGATATCAAACCTTCTAATTTGATGTTACGTACTCCCTCGCCCAGTGTCATCTCTCAAGGGGGAACAGGA TGGGAACAATTAGTTTTAATTGATTTCGGTGGGGCAAAACAATTTAATACAGGAAGACAGCGCCAAGAATCTAGTTCCAC AAGGTTATTTTCTTCGGGTTACAGTCCACCAGAACAAGTGACGGGTGGGCATATCGGGCCGAGTGTTGATTTTTATGCCC TCGGTCGTACGATGATTGAATTACTCACAGGTAAGTATCCACCAGAGTTGGAAGATCCCCAGACGGGGGTTTTGCATTGG CGTAATAGAGTTACTATCAGACCTGAGTTGGCAGATTTACTAGATGAGATGGTGCATGAGGATGTGCGATCGCGCCCGGC GAATGCTGCTATGATTCAAAAGCGGTTAACAAAAATTAACCAGCCCGCTTCAGGACAGAACAATTTTCAACAGTGGTTAA CACAGCTTGCCAATCAACTAGCACTATTAAATCAATCTACAGAGCAAGTTTTCAGCAACTTGGGACAAACCTTAGGCAAA ATCCTGCGGTGGATTGCACAGACAATAGTGAAAATCATCACAGCTTGTTTTTCCACCATTTGGGCAATGTTGTTAACTGG TCTTGGTGCGAGTGTAGGAACGATCGCTGGATTTATTTTGGCATATCGCACAAACTTAGGCGATCGCTTAATAGAATTTA TTGCCAGTCAATTACCCGAATTAATACCTAACCCTGAATCAGGATTTGGTGCAGAAATCATCGTATTTGCGGCCGCAGGC TTAGGTACAGCCTGGGGACTGACAGCATCCGGATGTTTTGCCCAAAGACGGCGGTTTTTAGTCGCCTCATTCATGGGGAT AATCAGCTACGCCTTTGGCTGGTTATTGTGGCAAATCATCACATCAACCGCAGATAGCGGTGAAGGTTTAGTAGGCGCAA CCTCCATAGCCGTATTTTTACTAGCTCTAAGTATGAGTTTCCGTAGCCATCACATAGTTTATGCCATGATTGGCTCATTT GGAACAGCGATCGTTGTGGCAATTTTGATAGTTTTAGGTTTTCCCACTACCGTTTTACAATTTTCTAATCGTCACCTCTG GTCAGAATTATCCTTACCTATCATCTTCTTTAGCTCTATCGGTATTTTGATGAGCTTTTGGTTAGGCGTAAGCTACTACC TCATTGTGCCAGGATTGCGGTTTTTGGGTTGGCGTTGA
Upstream 100 bases:
>100_bases CTTGGTATACCGTTCTTCTGGGGTTCACTGCATAAATCCTGACTGTCAACGTCCCTACCCCCAGCCCTGGGGTAACAAAT TTTGTAACAGCTGTGGCGCG
Downstream 100 bases:
>100_bases TTGTTAGGGGTTTAGAGGTTTAGGGGTGTAGGGGGAAATTTGACAACCGAAAATTGTACAGATGCGATTAATCGCGTCTC TAACAAACACAAATTAAGAC
Product: serine/threonine protein kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 545; Mature: 545
Protein sequence:
>545_residues MLQLLDRYVPLQTLGAGGFAQIYTVWDEKTQTEKVLKVLIEDSPKALELFTQEAEVLVRLRHPGVPKVEADGHFQVNLSN PKPRQLPCLVMEKINGPTLEEMLNKYPQGCPENLVLNWLTQGIKILQELHKHQIIHRDIKPSNLMLRTPSPSVISQGGTG WEQLVLIDFGGAKQFNTGRQRQESSSTRLFSSGYSPPEQVTGGHIGPSVDFYALGRTMIELLTGKYPPELEDPQTGVLHW RNRVTIRPELADLLDEMVHEDVRSRPANAAMIQKRLTKINQPASGQNNFQQWLTQLANQLALLNQSTEQVFSNLGQTLGK ILRWIAQTIVKIITACFSTIWAMLLTGLGASVGTIAGFILAYRTNLGDRLIEFIASQLPELIPNPESGFGAEIIVFAAAG LGTAWGLTASGCFAQRRRFLVASFMGIISYAFGWLLWQIITSTADSGEGLVGATSIAVFLLALSMSFRSHHIVYAMIGSF GTAIVVAILIVLGFPTTVLQFSNRHLWSELSLPIIFFSSIGILMSFWLGVSYYLIVPGLRFLGWR
Sequences:
>Translated_545_residues MLQLLDRYVPLQTLGAGGFAQIYTVWDEKTQTEKVLKVLIEDSPKALELFTQEAEVLVRLRHPGVPKVEADGHFQVNLSN PKPRQLPCLVMEKINGPTLEEMLNKYPQGCPENLVLNWLTQGIKILQELHKHQIIHRDIKPSNLMLRTPSPSVISQGGTG WEQLVLIDFGGAKQFNTGRQRQESSSTRLFSSGYSPPEQVTGGHIGPSVDFYALGRTMIELLTGKYPPELEDPQTGVLHW RNRVTIRPELADLLDEMVHEDVRSRPANAAMIQKRLTKINQPASGQNNFQQWLTQLANQLALLNQSTEQVFSNLGQTLGK ILRWIAQTIVKIITACFSTIWAMLLTGLGASVGTIAGFILAYRTNLGDRLIEFIASQLPELIPNPESGFGAEIIVFAAAG LGTAWGLTASGCFAQRRRFLVASFMGIISYAFGWLLWQIITSTADSGEGLVGATSIAVFLLALSMSFRSHHIVYAMIGSF GTAIVVAILIVLGFPTTVLQFSNRHLWSELSLPIIFFSSIGILMSFWLGVSYYLIVPGLRFLGWR >Mature_545_residues MLQLLDRYVPLQTLGAGGFAQIYTVWDEKTQTEKVLKVLIEDSPKALELFTQEAEVLVRLRHPGVPKVEADGHFQVNLSN PKPRQLPCLVMEKINGPTLEEMLNKYPQGCPENLVLNWLTQGIKILQELHKHQIIHRDIKPSNLMLRTPSPSVISQGGTG WEQLVLIDFGGAKQFNTGRQRQESSSTRLFSSGYSPPEQVTGGHIGPSVDFYALGRTMIELLTGKYPPELEDPQTGVLHW RNRVTIRPELADLLDEMVHEDVRSRPANAAMIQKRLTKINQPASGQNNFQQWLTQLANQLALLNQSTEQVFSNLGQTLGK ILRWIAQTIVKIITACFSTIWAMLLTGLGASVGTIAGFILAYRTNLGDRLIEFIASQLPELIPNPESGFGAEIIVFAAAG LGTAWGLTASGCFAQRRRFLVASFMGIISYAFGWLLWQIITSTADSGEGLVGATSIAVFLLALSMSFRSHHIVYAMIGSF GTAIVVAILIVLGFPTTVLQFSNRHLWSELSLPIIFFSSIGILMSFWLGVSYYLIVPGLRFLGWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
Organism=Homo sapiens, GI299758415, Length=255, Percent_Identity=28.2352941176471, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI41352712, Length=255, Percent_Identity=28.2352941176471, Blast_Score=83, Evalue=5e-16, Organism=Homo sapiens, GI299758411, Length=223, Percent_Identity=29.1479820627803, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI225637562, Length=150, Percent_Identity=32, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI41281753, Length=150, Percent_Identity=32, Blast_Score=74, Evalue=5e-13, Organism=Homo sapiens, GI225637560, Length=150, Percent_Identity=32, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI37596297, Length=226, Percent_Identity=27.8761061946903, Blast_Score=73, Evalue=7e-13, Organism=Homo sapiens, GI120659787, Length=226, Percent_Identity=29.2035398230088, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI4503427, Length=223, Percent_Identity=28.6995515695067, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI120659785, Length=220, Percent_Identity=28.6363636363636, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI19923468, Length=220, Percent_Identity=28.6363636363636, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI120659782, Length=220, Percent_Identity=28.6363636363636, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI153281169, Length=223, Percent_Identity=28.6995515695067, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI225735561, Length=230, Percent_Identity=26.9565217391304, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI32698688, Length=223, Percent_Identity=26.0089686098655, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI62241001, Length=221, Percent_Identity=27.1493212669683, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI57222269, Length=224, Percent_Identity=26.3392857142857, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI115529463, Length=268, Percent_Identity=26.1194029850746, Blast_Score=68, Evalue=3e-11, Organism=Homo sapiens, GI5031689, Length=266, Percent_Identity=26.3157894736842, Blast_Score=66, Evalue=7e-11, Organism=Homo sapiens, GI153945765, Length=223, Percent_Identity=26.0089686098655, Blast_Score=66, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17565634, Length=224, Percent_Identity=30.3571428571429, Blast_Score=83, Evalue=4e-16, Organism=Caenorhabditis elegans, GI115532862, Length=228, Percent_Identity=28.5087719298246, Blast_Score=66, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71988995, Length=228, Percent_Identity=28.5087719298246, Blast_Score=66, Evalue=5e-11, Organism=Caenorhabditis elegans, GI115532860, Length=228, Percent_Identity=28.5087719298246, Blast_Score=66, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6320102, Length=240, Percent_Identity=29.5833333333333, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6325053, Length=266, Percent_Identity=27.4436090225564, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI161076714, Length=226, Percent_Identity=30.5309734513274, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI85724948, Length=220, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=5e-12, Organism=Drosophila melanogaster, GI85724946, Length=220, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=5e-12, Organism=Drosophila melanogaster, GI17737415, Length=220, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=5e-12, Organism=Drosophila melanogaster, GI45552377, Length=220, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=5e-12, Organism=Drosophila melanogaster, GI45552375, Length=220, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=5e-12, Organism=Drosophila melanogaster, GI85724764, Length=244, Percent_Identity=28.2786885245902, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI85724762, Length=244, Percent_Identity=28.2786885245902, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI85724760, Length=244, Percent_Identity=28.2786885245902, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI85724758, Length=244, Percent_Identity=28.2786885245902, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI85724756, Length=244, Percent_Identity=28.2786885245902, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR000719 - InterPro: IPR017441 - InterPro: IPR017442 [H]
Pfam domain/function: PF00069 Pkinase [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 60400; Mature: 60400
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: PS00108 PROTEIN_KINASE_ST ; PS50011 PROTEIN_KINASE_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQLLDRYVPLQTLGAGGFAQIYTVWDEKTQTEKVLKVLIEDSPKALELFTQEAEVLVRL CHHHHHHHCCHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RHPGVPKVEADGHFQVNLSNPKPRQLPCLVMEKINGPTLEEMLNKYPQGCPENLVLNWLT CCCCCCCEECCCEEEEEECCCCCCCCHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHH QGIKILQELHKHQIIHRDIKPSNLMLRTPSPSVISQGGTGWEQLVLIDFGGAKQFNTGRQ HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHCCCCCCCEEEEEEECCCCCCCCCCHH RQESSSTRLFSSGYSPPEQVTGGHIGPSVDFYALGRTMIELLTGKYPPELEDPQTGVLHW HHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEE RNRVTIRPELADLLDEMVHEDVRSRPANAAMIQKRLTKINQPASGQNNFQQWLTQLANQL CCCEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH ALLNQSTEQVFSNLGQTLGKILRWIAQTIVKIITACFSTIWAMLLTGLGASVGTIAGFIL HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AYRTNLGDRLIEFIASQLPELIPNPESGFGAEIIVFAAAGLGTAWGLTASGCFAQRRRFL HHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHH VASFMGIISYAFGWLLWQIITSTADSGEGLVGATSIAVFLLALSMSFRSHHIVYAMIGSF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH GTAIVVAILIVLGFPTTVLQFSNRHLWSELSLPIIFFSSIGILMSFWLGVSYYLIVPGLR HHHHHHHHHHHHCCCHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH FLGWR HHCCC >Mature Secondary Structure MLQLLDRYVPLQTLGAGGFAQIYTVWDEKTQTEKVLKVLIEDSPKALELFTQEAEVLVRL CHHHHHHHCCHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RHPGVPKVEADGHFQVNLSNPKPRQLPCLVMEKINGPTLEEMLNKYPQGCPENLVLNWLT CCCCCCCEECCCEEEEEECCCCCCCCHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHH QGIKILQELHKHQIIHRDIKPSNLMLRTPSPSVISQGGTGWEQLVLIDFGGAKQFNTGRQ HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHCCCCCCCEEEEEEECCCCCCCCCCHH RQESSSTRLFSSGYSPPEQVTGGHIGPSVDFYALGRTMIELLTGKYPPELEDPQTGVLHW HHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEE RNRVTIRPELADLLDEMVHEDVRSRPANAAMIQKRLTKINQPASGQNNFQQWLTQLANQL CCCEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH ALLNQSTEQVFSNLGQTLGKILRWIAQTIVKIITACFSTIWAMLLTGLGASVGTIAGFIL HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AYRTNLGDRLIEFIASQLPELIPNPESGFGAEIIVFAAAGLGTAWGLTASGCFAQRRRFL HHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHH VASFMGIISYAFGWLLWQIITSTADSGEGLVGATSIAVFLLALSMSFRSHHIVYAMIGSF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH GTAIVVAILIVLGFPTTVLQFSNRHLWSELSLPIIFFSSIGILMSFWLGVSYYLIVPGLR HHHHHHHHHHHHCCCHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH FLGWR HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12168951; 8905231 [H]