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The map label for this gene is pcyA

Identifier: 75909790

GI number: 75909790

Start: 4465555

End: 4466292

Strand: Direct

Name: pcyA

Synonym: Ava_3585

Alternate gene names: 75909790

Gene position: 4465555-4466292 (Clockwise)

Preceding gene: 75909789

Following gene: 75909791

Centisome position: 70.15

GC content: 46.61

Gene sequence:

>738_bases
ATGTCACTTACTTCCATTCCCTCGCTACGTGAGCAACAACATCCCCTCATTCGCCAACTAGCTGACTGTATTGAAGAAGT
TTGGCATCAGCACTTGGATTTGTCGCCTTACCATTTGCCTGCTGAGTTGGGGTATGTGGAAGGGAGACTAGAGGGTGAGA
AACTGACGATTGAAAACCGTTGCTATCAAACACCCCAGTTTCGGAAGATGCACTTGGAATTAGCCAAGGTAGGAAATATG
CTCGACATCCTGCACTGTGTGATGTTTCCCCGTCCAGAGTATGACCTACCGATGTTTGGCTGTGACTTGGTTGGGGGTAG
GGGTCAAATTAGTGCAGCGATCGCTGACCTTTCTCCTGTACACTTAGACCGCACCCTACCTGCATCCTATAATTCGGCGC
TGACAAATCTCGACACACTAAATTTCTCTCAACCCAGAGAATTGCCAGAATGGGGAAATATCTTCTCTGATTTCTGCATT
TTTGTGCGTCCGAGTTCGCCAGAAGAAGAGGCGATGTTTTTAGGACGAGTGCGGGAGTTTTTGCAAGTTCATTGTCAAGG
TGCGATCGCCGCTAGTCCTGTTTCAGCAGAACAAAAACAGCACATTTTGGCTGGACAACACAATTACTGTAGCAAACAGC
AACAAAACGATAAAACTCGCCGGGTGCTAGAAAAAGCTTTTGGTACAGATTGGGCAGAAAATTACATGACCACAGTGTTG
TTTGACCTCCCAGAATAA

Upstream 100 bases:

>100_bases
CAATCCCCAATCCCCAATCCCCTAACTTATGTTGCAATCCAGAACAGAAGTAACGCTCCTGGCCGTAGACTGACATCTAG
ATTGCATTCTCAAATAGAAT

Downstream 100 bases:

>100_bases
CCTGACAAGTCATAGATCACCGACTTTTTTGAAACAGTCGGTGATCTGAACACCTGCAAAACTCTTCCGGTCAGCGATCG
CCCCTCATTTGTACAGTCTG

Product: phycocyanobilin:ferredoxin oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MSLTSIPSLREQQHPLIRQLADCIEEVWHQHLDLSPYHLPAELGYVEGRLEGEKLTIENRCYQTPQFRKMHLELAKVGNM
LDILHCVMFPRPEYDLPMFGCDLVGGRGQISAAIADLSPVHLDRTLPASYNSALTNLDTLNFSQPRELPEWGNIFSDFCI
FVRPSSPEEEAMFLGRVREFLQVHCQGAIAASPVSAEQKQHILAGQHNYCSKQQQNDKTRRVLEKAFGTDWAENYMTTVL
FDLPE

Sequences:

>Translated_245_residues
MSLTSIPSLREQQHPLIRQLADCIEEVWHQHLDLSPYHLPAELGYVEGRLEGEKLTIENRCYQTPQFRKMHLELAKVGNM
LDILHCVMFPRPEYDLPMFGCDLVGGRGQISAAIADLSPVHLDRTLPASYNSALTNLDTLNFSQPRELPEWGNIFSDFCI
FVRPSSPEEEAMFLGRVREFLQVHCQGAIAASPVSAEQKQHILAGQHNYCSKQQQNDKTRRVLEKAFGTDWAENYMTTVL
FDLPE
>Mature_244_residues
SLTSIPSLREQQHPLIRQLADCIEEVWHQHLDLSPYHLPAELGYVEGRLEGEKLTIENRCYQTPQFRKMHLELAKVGNML
DILHCVMFPRPEYDLPMFGCDLVGGRGQISAAIADLSPVHLDRTLPASYNSALTNLDTLNFSQPRELPEWGNIFSDFCIF
VRPSSPEEEAMFLGRVREFLQVHCQGAIAASPVSAEQKQHILAGQHNYCSKQQQNDKTRRVLEKAFGTDWAENYMTTVLF
DLPE

Specific function: Catalyzes the four-electron reduction of biliverdin IX- alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HY2 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PCYA_ANAVT (Q3M745)

Other databases:

- EMBL:   CP000117
- RefSeq:   YP_324086.1
- HSSP:   Q55891
- ProteinModelPortal:   Q3M745
- SMR:   Q3M745
- STRING:   Q3M745
- GeneID:   3679355
- GenomeReviews:   CP000117_GR
- KEGG:   ava:Ava_3585
- NMPDR:   fig|240292.3.peg.4513
- eggNOG:   NOG27460
- HOGENOM:   HBG561233
- OMA:   NDKTRRV
- ProtClustDB:   PRK02816
- BioCyc:   AVAR240292:AVA_3585-MONOMER
- HAMAP:   MF_00618
- InterPro:   IPR009249
- InterPro:   IPR022870

Pfam domain/function: PF05996 Fe_bilin_red

EC number: =1.3.7.5

Molecular weight: Translated: 27940; Mature: 27809

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTSIPSLREQQHPLIRQLADCIEEVWHQHLDLSPYHLPAELGYVEGRLEGEKLTIENR
CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCHHHCEECCCEEEECCC
CYQTPQFRKMHLELAKVGNMLDILHCVMFPRPEYDLPMFGCDLVGGRGQISAAIADLSPV
CCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEECCCCCHHHHHHHCCCCH
HLDRTLPASYNSALTNLDTLNFSQPRELPEWGNIFSDFCIFVRPSSPEEEAMFLGRVREF
HCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHEEEECCCCCHHHHHHHHHHHHH
LQVHCQGAIAASPVSAEQKQHILAGQHNYCSKQQQNDKTRRVLEKAFGTDWAENYMTTVL
HHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHE
FDLPE
EECCC
>Mature Secondary Structure 
SLTSIPSLREQQHPLIRQLADCIEEVWHQHLDLSPYHLPAELGYVEGRLEGEKLTIENR
CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCHHHCEECCCEEEECCC
CYQTPQFRKMHLELAKVGNMLDILHCVMFPRPEYDLPMFGCDLVGGRGQISAAIADLSPV
CCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEECCCCCHHHHHHHCCCCH
HLDRTLPASYNSALTNLDTLNFSQPRELPEWGNIFSDFCIFVRPSSPEEEAMFLGRVREF
HCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHEEEECCCCCHHHHHHHHHHHHH
LQVHCQGAIAASPVSAEQKQHILAGQHNYCSKQQQNDKTRRVLEKAFGTDWAENYMTTVL
HHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHE
FDLPE
EECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA