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The map label for this gene is cotSA [H]

Identifier: 75909778

GI number: 75909778

Start: 4451259

End: 4452395

Strand: Direct

Name: cotSA [H]

Synonym: Ava_3573

Alternate gene names: 75909778

Gene position: 4451259-4452395 (Clockwise)

Preceding gene: 75909777

Following gene: 75909786

Centisome position: 69.93

GC content: 41.6

Gene sequence:

>1137_bases
ATGAAAATATTATTTTTAGACCAGAGTGGTAAACCCGGTGGTGCAGAGTTGTGTTTAATTGATATTGCGAAACCTTACAG
CGATCGCGCCTTGGTTGGTTTATTTGCGGATGGAGCATTTAAAACCTTACTAGAGCAACATCATATCCCGGTTGAAGTAT
TCACCAATCAGCCAATTCAAGTCCGCAAGCAAAGTAATTTATTGCAAGCATTTAGTAGCTTGGGACAACTTGCGCCTCTG
GTGGCTAAAGTTGTAGAGAAAGCCCGTGAATATGATGTAATCTACGCCAATACGCAAAAAGCCTTAGTTGTGGGGGCGAT
CGCTAGCTTTATCGCTCGTCGTCCTTTGGTTTATCATTTACATGACATTCTCTCCCCAGAACACTTTAGCCAAACTAACC
TGCGGGTTGCAGTTAACTTAGCTAATCGTTTCGCCTCATTGGTAATCGCCAATTCCCAAGCCAGTCAAACAGCATTTATC
CAAGCTGGAGGACGCGCAGAGCTAACGACAGTCATCTACAACGGTTTTGATATAAATTTATATCAAACTGCTGCATCAGA
TATTAGTAAATTACGGCAATATTTAGGCATAGCAAATAATTTTGTAGTTGGACATTTCAGCCGTCTTTCACCTTGGAAGG
GACAACATATTCTAATTGATGCACTAGCTCAATGTCCGCCACAAGTAACGGCAATTTTGGTCGGTGATGCCCTATTTGGT
GAGCAAGAATATGTCAAAGAATTACATCAACAAATTACCAGATTAGGGCTAGAAAACCGCGTTAGATTTTTAGGATTCCG
GGCGGATATTCCTCAATTAATGGCGGCTTGTGATTTAGTGGCTCATACTTCCACAGCCCCAGAACCCTTTGGTAGAGTAA
TTGTTGAAGCCATGCTTTGTGGCAAACCTGTAGTTGCAGCCAAAGCCGGTGGTGCAATGGAATTAGTCGAACATGGAGTT
AATGGCTTTTTAACCACACCAGGAGAATCCCAAGAACTAGCCGATATTATTAATACCTGTTTCCAAGAAAAACACACCAC
TGCAACTATTGCTAGTAATGCTAAAGCTATTGCTAGTCAGCGTTTTAGTGTCCAAAATATCAATCAACAGATTGCCCAAG
TCTTACACACAATTTAA

Upstream 100 bases:

>100_bases
ATGTCGCCAATATGCTGTAACTAACTTTGATTGGCAGAAAATTGCTCAACAAGTACGGCGAGTTATTTTAGCTTAAAAAA
ATTAAGAGAGTAGTTGACTA

Downstream 100 bases:

>100_bases
GTAAAAGCTTTTTCTCCCTACCTAATCTTTATTTAACTTTCTCGTCATCACCTAACATTTTTAATAGCTTCCTCCCTACT
AAAACACTAACAATTCCGGC

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MKILFLDQSGKPGGAELCLIDIAKPYSDRALVGLFADGAFKTLLEQHHIPVEVFTNQPIQVRKQSNLLQAFSSLGQLAPL
VAKVVEKAREYDVIYANTQKALVVGAIASFIARRPLVYHLHDILSPEHFSQTNLRVAVNLANRFASLVIANSQASQTAFI
QAGGRAELTTVIYNGFDINLYQTAASDISKLRQYLGIANNFVVGHFSRLSPWKGQHILIDALAQCPPQVTAILVGDALFG
EQEYVKELHQQITRLGLENRVRFLGFRADIPQLMAACDLVAHTSTAPEPFGRVIVEAMLCGKPVVAAKAGGAMELVEHGV
NGFLTTPGESQELADIINTCFQEKHTTATIASNAKAIASQRFSVQNINQQIAQVLHTI

Sequences:

>Translated_378_residues
MKILFLDQSGKPGGAELCLIDIAKPYSDRALVGLFADGAFKTLLEQHHIPVEVFTNQPIQVRKQSNLLQAFSSLGQLAPL
VAKVVEKAREYDVIYANTQKALVVGAIASFIARRPLVYHLHDILSPEHFSQTNLRVAVNLANRFASLVIANSQASQTAFI
QAGGRAELTTVIYNGFDINLYQTAASDISKLRQYLGIANNFVVGHFSRLSPWKGQHILIDALAQCPPQVTAILVGDALFG
EQEYVKELHQQITRLGLENRVRFLGFRADIPQLMAACDLVAHTSTAPEPFGRVIVEAMLCGKPVVAAKAGGAMELVEHGV
NGFLTTPGESQELADIINTCFQEKHTTATIASNAKAIASQRFSVQNINQQIAQVLHTI
>Mature_378_residues
MKILFLDQSGKPGGAELCLIDIAKPYSDRALVGLFADGAFKTLLEQHHIPVEVFTNQPIQVRKQSNLLQAFSSLGQLAPL
VAKVVEKAREYDVIYANTQKALVVGAIASFIARRPLVYHLHDILSPEHFSQTNLRVAVNLANRFASLVIANSQASQTAFI
QAGGRAELTTVIYNGFDINLYQTAASDISKLRQYLGIANNFVVGHFSRLSPWKGQHILIDALAQCPPQVTAILVGDALFG
EQEYVKELHQQITRLGLENRVRFLGFRADIPQLMAACDLVAHTSTAPEPFGRVIVEAMLCGKPVVAAKAGGAMELVEHGV
NGFLTTPGESQELADIINTCFQEKHTTATIASNAKAIASQRFSVQNINQQIAQVLHTI

Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Homo sapiens, GI14861836, Length=405, Percent_Identity=22.2222222222222, Blast_Score=66, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 41189; Mature: 41189

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILFLDQSGKPGGAELCLIDIAKPYSDRALVGLFADGAFKTLLEQHHIPVEVFTNQPIQ
CEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEECCHHHHHHHHHCCCCEEEECCCCHH
VRKQSNLLQAFSSLGQLAPLVAKVVEKAREYDVIYANTQKALVVGAIASFIARRPLVYHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHCCHHHHH
HDILSPEHFSQTNLRVAVNLANRFASLVIANSQASQTAFIQAGGRAELTTVIYNGFDINL
HHHCCCCCCCCCCEEEEEEHHHHHHHHEEECCCCCCEEEEECCCCCEEEEEEECCEEEEE
YQTAASDISKLRQYLGIANNFVVGHFSRLSPWKGQHILIDALAQCPPQVTAILVGDALFG
HHHHHHHHHHHHHHHCCCCCCEEECHHHCCCCCCCCHHHHHHHHCCCHHEEEEECHHHCC
EQEYVKELHQQITRLGLENRVRFLGFRADIPQLMAACDLVAHTSTAPEPFGRVIVEAMLC
CHHHHHHHHHHHHHHCHHCCHHEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
GKPVVAAKAGGAMELVEHGVNGFLTTPGESQELADIINTCFQEKHTTATIASNAKAIASQ
CCCEEEECCCCHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCEEHHHCCHHHHHHH
RFSVQNINQQIAQVLHTI
CCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKILFLDQSGKPGGAELCLIDIAKPYSDRALVGLFADGAFKTLLEQHHIPVEVFTNQPIQ
CEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEECCHHHHHHHHHCCCCEEEECCCCHH
VRKQSNLLQAFSSLGQLAPLVAKVVEKAREYDVIYANTQKALVVGAIASFIARRPLVYHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHCCHHHHH
HDILSPEHFSQTNLRVAVNLANRFASLVIANSQASQTAFIQAGGRAELTTVIYNGFDINL
HHHCCCCCCCCCCEEEEEEHHHHHHHHEEECCCCCCEEEEECCCCCEEEEEEECCEEEEE
YQTAASDISKLRQYLGIANNFVVGHFSRLSPWKGQHILIDALAQCPPQVTAILVGDALFG
HHHHHHHHHHHHHHHCCCCCCEEECHHHCCCCCCCCHHHHHHHHCCCHHEEEEECHHHCC
EQEYVKELHQQITRLGLENRVRFLGFRADIPQLMAACDLVAHTSTAPEPFGRVIVEAMLC
CHHHHHHHHHHHHHHCHHCCHHEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
GKPVVAAKAGGAMELVEHGVNGFLTTPGESQELADIINTCFQEKHTTATIASNAKAIASQ
CCCEEEECCCCHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCEEHHHCCHHHHHHH
RFSVQNINQQIAQVLHTI
CCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7545510; 9387221; 9384377; 10234840 [H]