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The map label for this gene is ycaP [C]

Identifier: 75909615

GI number: 75909615

Start: 4234391

End: 4234909

Strand: Direct

Name: ycaP [C]

Synonym: Ava_3409

Alternate gene names: 75909615

Gene position: 4234391-4234909 (Clockwise)

Preceding gene: 75909614

Following gene: 75909616

Centisome position: 66.52

GC content: 38.92

Gene sequence:

>519_bases
ATGATGAATTGGTTTTCTATAAATTGGCACGCTATTTTTGTGCCTAGTATCAGTATTTTAGAGCTTGTAATCCGGGGATC
ATTGGTTTATTTGGCTCTTTTTTCTGTGCTGCGCTTGCTGCCTAGTAGACAGATGGGAACTTTAGGAATTACGGATTTGC
TCGTAGTTGTGCTATTTGCTGAAGCTGCTCAAAATGCGATGGCAAGTAACTATACATCGATTACTGAAGGAGCAATTCTT
GTCGGAACTGTCATTTTTTGGAGCTATTTTCTTAACTGGTTAGGTTATAAACTTCCGATAGTTCAACGTTTCTTAAATCC
ACCACCATTACTGTTAGTAAAAAATGGTAAGACGATTGAACGGCATTTGCAACGAGAATTAATTACAGAAGATGAGTTGA
AAAGCAAGTTACGTCAGCAAGGTGTAGAATTTTTAGCCGATGTCAAGTTGGCGTATATGGAAGCTGACGGTAGCATCAGT
ATTATTACATCGGAGTCAAAACTGGTGGCTAGGGAATAG

Upstream 100 bases:

>100_bases
GTCACGCTATGCCTTTAAATGATACAAATTCGGGAAATCGGCATTAGAGACGGTAAGGCATAGAGAAGATAGGGGAATCA
ACAATTAAAAATTACGAATT

Downstream 100 bases:

>100_bases
GGAGTAACAATTGTTAACTGATGACTGTCAACTGACAACTATCAACTGACAACTATCAACCAAAGCGGGGTAAAATATGA
CAGTTGTATTCTGCCGCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MMNWFSINWHAIFVPSISILELVIRGSLVYLALFSVLRLLPSRQMGTLGITDLLVVVLFAEAAQNAMASNYTSITEGAIL
VGTVIFWSYFLNWLGYKLPIVQRFLNPPPLLLVKNGKTIERHLQRELITEDELKSKLRQQGVEFLADVKLAYMEADGSIS
IITSESKLVARE

Sequences:

>Translated_172_residues
MMNWFSINWHAIFVPSISILELVIRGSLVYLALFSVLRLLPSRQMGTLGITDLLVVVLFAEAAQNAMASNYTSITEGAIL
VGTVIFWSYFLNWLGYKLPIVQRFLNPPPLLLVKNGKTIERHLQRELITEDELKSKLRQQGVEFLADVKLAYMEADGSIS
IITSESKLVARE
>Mature_172_residues
MMNWFSINWHAIFVPSISILELVIRGSLVYLALFSVLRLLPSRQMGTLGITDLLVVVLFAEAAQNAMASNYTSITEGAIL
VGTVIFWSYFLNWLGYKLPIVQRFLNPPPLLLVKNGKTIERHLQRELITEDELKSKLRQQGVEFLADVKLAYMEADGSIS
IITSESKLVARE

Specific function: Unknown

COG id: COG2323

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19399; Mature: 19399

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNWFSINWHAIFVPSISILELVIRGSLVYLALFSVLRLLPSRQMGTLGITDLLVVVLFA
CCCEEEECEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
EAAQNAMASNYTSITEGAILVGTVIFWSYFLNWLGYKLPIVQRFLNPPPLLLVKNGKTIE
HHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCHHH
RHLQRELITEDELKSKLRQQGVEFLADVKLAYMEADGSISIITSESKLVARE
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MMNWFSINWHAIFVPSISILELVIRGSLVYLALFSVLRLLPSRQMGTLGITDLLVVVLFA
CCCEEEECEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
EAAQNAMASNYTSITEGAILVGTVIFWSYFLNWLGYKLPIVQRFLNPPPLLLVKNGKTIE
HHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCHHH
RHLQRELITEDELKSKLRQQGVEFLADVKLAYMEADGSISIITSESKLVARE
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA