| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909315
Identifier: 75909315
GI number: 75909315
Start: 3863709
End: 3864212
Strand: Direct
Name: 75909315
Synonym: Ava_3108
Alternate gene names: NA
Gene position: 3863709-3864212 (Clockwise)
Preceding gene: 75909313
Following gene: 75909319
Centisome position: 60.7
GC content: 41.47
Gene sequence:
>504_bases ATGTATGTTTCCTTGCTACCTTATACAGATATGAAAAAGAAAAACAGTACGGCACTAATATTCAATTTTCAGCCTTTAGC TAAACTCATCACGACCATCGTTATTTCCTGTCTGGTGGTGTTGATTTCCTGGGTATGGACTCCATCTGCTATGGCCTTGA CTCAAATTAAACTATCTGATTTGTCTTATCAGGAGTGTCCAGCAGAACTAGCACAGGGGACTGTAGCCAGTAACAGCAGT ACATCCGCTAATTGCTTTATTGTCACTGGTAAAGCGGAAAATGGCACTTATAAGACAGTCTACGATGCAGATATCTACGG GCGCATTTATGATGCTAACAATGACCCGATATTGCAAAACCGCACCCGTCTAGGTTCTATTACTGAAGTTCCACCAGGAA TTAGTGATTTTGAATTGAGAATTACTGTACCTGCAAATCAGCCTTTACCTCTCAAGCTGAAGCAGTTTAAAGCGTCTGGT TTTAGCGCCCAAGTCCGTAAGTAA
Upstream 100 bases:
>100_bases AAATTCATTAGTCGGTTGTCAGTAGTCGGTTGTCAGTTGTTAATTGTGTTATTCTCCCCCATTCCCCAGTCCCCAGTCCC CAGTCCCCGTTATAAAGTTT
Downstream 100 bases:
>100_bases GTTGGAAATGAGGAGACTTGTAGAGACTTGTTTACCTTACGTCTCTACAAGTTTATGGCTCAGGTTGATTAAAATCCCTG TACGAATGGCAATCTAGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MYVSLLPYTDMKKKNSTALIFNFQPLAKLITTIVISCLVVLISWVWTPSAMALTQIKLSDLSYQECPAELAQGTVASNSS TSANCFIVTGKAENGTYKTVYDADIYGRIYDANNDPILQNRTRLGSITEVPPGISDFELRITVPANQPLPLKLKQFKASG FSAQVRK
Sequences:
>Translated_167_residues MYVSLLPYTDMKKKNSTALIFNFQPLAKLITTIVISCLVVLISWVWTPSAMALTQIKLSDLSYQECPAELAQGTVASNSS TSANCFIVTGKAENGTYKTVYDADIYGRIYDANNDPILQNRTRLGSITEVPPGISDFELRITVPANQPLPLKLKQFKASG FSAQVRK >Mature_167_residues MYVSLLPYTDMKKKNSTALIFNFQPLAKLITTIVISCLVVLISWVWTPSAMALTQIKLSDLSYQECPAELAQGTVASNSS TSANCFIVTGKAENGTYKTVYDADIYGRIYDANNDPILQNRTRLGSITEVPPGISDFELRITVPANQPLPLKLKQFKASG FSAQVRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18385; Mature: 18385
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVSLLPYTDMKKKNSTALIFNFQPLAKLITTIVISCLVVLISWVWTPSAMALTQIKLSD CEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC LSYQECPAELAQGTVASNSSTSANCFIVTGKAENGTYKTVYDADIYGRIYDANNDPILQN CCHHHCHHHHHCCEECCCCCCCCEEEEEEECCCCCCEEEEECCEEEEEEEECCCCCCCCC RTRLGSITEVPPGISDFELRITVPANQPLPLKLKQFKASGFSAQVRK CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHEEECCCCCEEECCC >Mature Secondary Structure MYVSLLPYTDMKKKNSTALIFNFQPLAKLITTIVISCLVVLISWVWTPSAMALTQIKLSD CEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC LSYQECPAELAQGTVASNSSTSANCFIVTGKAENGTYKTVYDADIYGRIYDANNDPILQN CCHHHCHHHHHCCEECCCCCCCCEEEEEEECCCCCCEEEEECCEEEEEEEECCCCCCCCC RTRLGSITEVPPGISDFELRITVPANQPLPLKLKQFKASGFSAQVRK CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHEEECCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA