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The map label for this gene is nifU [H]

Identifier: 75909243

GI number: 75909243

Start: 3757926

End: 3758156

Strand: Direct

Name: nifU [H]

Synonym: Ava_3034

Alternate gene names: 75909243

Gene position: 3757926-3758156 (Clockwise)

Preceding gene: 75909242

Following gene: 75909244

Centisome position: 59.03

GC content: 41.99

Gene sequence:

>231_bases
ATGGAACTAACAATTGACAACGTGGAAACTGTTTTAGATGAAATGCGCCCTTATCTAATTTCTGATGGTGGTAACGTGGA
ACTTGTAGAACTCGATGGGCCTATTGTTAAATTACGTTTACAAGGTGCTTGCGGTTCTTGTCCTAGTTCTACCATGACTC
TGAGAATGGGTATTGAGCGCCGTCTGCGGGAAATGATTCCTGAAATTGCCGAAGTTGAACAGGTAATTTAG

Upstream 100 bases:

>100_bases
AAAACTTTGTGTGGGATATAGAAAAATAGGTAAAGGCAAAATAGCCGATGCCAAATGTTTCGTATCTCACAAATTTTGTT
AATTTACTAGGTATCAAGCA

Downstream 100 bases:

>100_bases
GGAATAGGGACTGGGGACTGGGGACTAGGTAAGGACTGAGGATTAGGAAAGAGGCAATTTACCCAATCCCCAATACCCAA
TCCCCGATACCCAATACCCA

Product: nitrogen-fixing NifU-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MELTIDNVETVLDEMRPYLISDGGNVELVELDGPIVKLRLQGACGSCPSSTMTLRMGIERRLREMIPEIAEVEQVI

Sequences:

>Translated_76_residues
MELTIDNVETVLDEMRPYLISDGGNVELVELDGPIVKLRLQGACGSCPSSTMTLRMGIERRLREMIPEIAEVEQVI
>Mature_76_residues
MELTIDNVETVLDEMRPYLISDGGNVELVELDGPIVKLRLQGACGSCPSSTMTLRMGIERRLREMIPEIAEVEQVI

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17541876, Length=61, Percent_Identity=45.9016393442623, Blast_Score=62, Evalue=4e-11,
Organism=Drosophila melanogaster, GI45551492, Length=70, Percent_Identity=42.8571428571429, Blast_Score=66, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24643765, Length=70, Percent_Identity=42.8571428571429, Blast_Score=66, Evalue=4e-12,
Organism=Drosophila melanogaster, GI45556188, Length=70, Percent_Identity=42.8571428571429, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001075
- ProDom:   PD002830 [H]

Pfam domain/function: PF01106 NifU [H]

EC number: NA

Molecular weight: Translated: 8475; Mature: 8475

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELTIDNVETVLDEMRPYLISDGGNVELVELDGPIVKLRLQGACGSCPSSTMTLRMGIER
CCCCHHHHHHHHHHCCCEEECCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEHHHHHH
RLREMIPEIAEVEQVI
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MELTIDNVETVLDEMRPYLISDGGNVELVELDGPIVKLRLQGACGSCPSSTMTLRMGIER
CCCCHHHHHHHHHHCCCEEECCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEHHHHHH
RLREMIPEIAEVEQVI
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8424961 [H]