| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is vanA [H]
Identifier: 75908048
GI number: 75908048
Start: 2273810
End: 2274853
Strand: Direct
Name: vanA [H]
Synonym: Ava_1827
Alternate gene names: 75908048
Gene position: 2273810-2274853 (Clockwise)
Preceding gene: 75908045
Following gene: 75908051
Centisome position: 35.72
GC content: 39.75
Gene sequence:
>1044_bases ATGTCTTCTCTGTCCCAAGCTGTGTCTATTCATGATGTCCGTCAATTGGGTATTAACCTGAATCATTGGTATGTAGTTGC ACGTAGTCAGGAAGTCACAAATAAACCTTTGGGAGTGACACTTTGGCATCAGGCGATCGCACTTTATCGAGATAGCGAAG GACAAATACACGCCCTAGAAGACCGTTGCCCACATCGCCAAGTTAAACTTAGTCACGGTCAAGTTATCGGCAATGAGTTG GAATGTGCTTATCATGGTTGGCGCTTGAATCATCATGGTGAATGTGCAGCCGTTCCATACTTAGCAGAGAATCAGAAACT ACCAAACTGCAAAATTCGCCATTATCCAGTCAAAGAACAAGACGGTTTTATTTGGTTATTCCCTGGTGATGGAGAACCAT CTATAGAGCCAATGGGTTTACCAGAGTGGGATCATTTAAATTACATTGCTAGTGTTGCCATTATTAATTGTCAGGCACAT TATTCTTATTTAATTGAAAACCTGATGGATATGTATCATGGACATTTACATCAGGATTTACAAGCTTGGGCGCAAGCAGA ATTACAAGATATTGAGGAAACCGATGAACGTGTAGATGCTCATTATCAAGCCCAAAGTTATTACAAAATAGATAAAATCT GGTCTATCTCCCAATTATTTTTCCCAGCTTTGCGCCGCTTACATCCTGAACCCCTTGATGTGAGTTACATTTATCCCCAC TGGATGTCTACATTAGGAAAAGATTTTAAAATTTACTGTTTATTGTGTCCGATAAATGAGACACAAACCAAAGCTTATTT AATTCATTTCACATCTTTAAACGCTTTTTGGCGCTTGCACAAATTGCCTGTATGGTTTCGTCGCTTTGTCAAAGATAGTT TGTTTGGTGCAGCCCAGAAATTCCTCGATGGGTTGGTGGTTAAAGATGTGCAGATGATTGAAGAAGAACAGCAAGCTTAT TTACAAAATCCCCAAAGGCGCAATTATGAGTTGAATCGGGCTTTAGTTAGCGTACAGAGGTTGATGAAAAATCAAGCATC ATAA
Upstream 100 bases:
>100_bases GTGGGGGTGTAAGGGAATAGGGGTGTAAGAGAAGTAACTAATGACAACTGACAACTGACAACCGACAACTGACAACTGAC AAATTTCAAAAAGGATATTT
Downstream 100 bases:
>100_bases GGTTCCGAGATAATTTTGGCATTGAGCAGGGTAAAAATTCTATCAAGTTCTAATATTCCTGCCAATTCTGCATCTTCCTC TGAGGTTAGCAGTCCGGCTT
Product: Rieske (2Fe-2S) protein
Products: NA
Alternate protein names: 4-hydroxy-3-methoxybenzoate demethylase [H]
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MSSLSQAVSIHDVRQLGINLNHWYVVARSQEVTNKPLGVTLWHQAIALYRDSEGQIHALEDRCPHRQVKLSHGQVIGNEL ECAYHGWRLNHHGECAAVPYLAENQKLPNCKIRHYPVKEQDGFIWLFPGDGEPSIEPMGLPEWDHLNYIASVAIINCQAH YSYLIENLMDMYHGHLHQDLQAWAQAELQDIEETDERVDAHYQAQSYYKIDKIWSISQLFFPALRRLHPEPLDVSYIYPH WMSTLGKDFKIYCLLCPINETQTKAYLIHFTSLNAFWRLHKLPVWFRRFVKDSLFGAAQKFLDGLVVKDVQMIEEEQQAY LQNPQRRNYELNRALVSVQRLMKNQAS
Sequences:
>Translated_347_residues MSSLSQAVSIHDVRQLGINLNHWYVVARSQEVTNKPLGVTLWHQAIALYRDSEGQIHALEDRCPHRQVKLSHGQVIGNEL ECAYHGWRLNHHGECAAVPYLAENQKLPNCKIRHYPVKEQDGFIWLFPGDGEPSIEPMGLPEWDHLNYIASVAIINCQAH YSYLIENLMDMYHGHLHQDLQAWAQAELQDIEETDERVDAHYQAQSYYKIDKIWSISQLFFPALRRLHPEPLDVSYIYPH WMSTLGKDFKIYCLLCPINETQTKAYLIHFTSLNAFWRLHKLPVWFRRFVKDSLFGAAQKFLDGLVVKDVQMIEEEQQAY LQNPQRRNYELNRALVSVQRLMKNQAS >Mature_346_residues SSLSQAVSIHDVRQLGINLNHWYVVARSQEVTNKPLGVTLWHQAIALYRDSEGQIHALEDRCPHRQVKLSHGQVIGNELE CAYHGWRLNHHGECAAVPYLAENQKLPNCKIRHYPVKEQDGFIWLFPGDGEPSIEPMGLPEWDHLNYIASVAIINCQAHY SYLIENLMDMYHGHLHQDLQAWAQAELQDIEETDERVDAHYQAQSYYKIDKIWSISQLFFPALRRLHPEPLDVSYIYPHW MSTLGKDFKIYCLLCPINETQTKAYLIHFTSLNAFWRLHKLPVWFRRFVKDSLFGAAQKFLDGLVVKDVQMIEEEQQAYL QNPQRRNYELNRALVSVQRLMKNQAS
Specific function: Unknown
COG id: COG4638
COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017941 - InterPro: IPR015881 [H]
Pfam domain/function: PF00355 Rieske [H]
EC number: =1.14.13.82 [H]
Molecular weight: Translated: 40560; Mature: 40428
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLSQAVSIHDVRQLGINLNHWYVVARSQEVTNKPLGVTLWHQAIALYRDSEGQIHALE CCCHHHHHHHHHHHHHCCCCCEEEEEEECHHCCCCCCCHHHHHHHHHHEECCCCCEEEHH DRCPHRQVKLSHGQVIGNELECAYHGWRLNHHGECAAVPYLAENQKLPNCKIRHYPVKEQ HCCCCCEEEECCCEEECCCEEEEEECEEECCCCCEEECCEECCCCCCCCCEEEECCCCCC DGFIWLFPGDGEPSIEPMGLPEWDHLNYIASVAIINCQAHYSYLIENLMDMYHGHLHQDL CCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHH QAWAQAELQDIEETDERVDAHYQAQSYYKIDKIWSISQLFFPALRRLHPEPLDVSYIYPH HHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHCCCCCCCEEEECHH WMSTLGKDFKIYCLLCPINETQTKAYLIHFTSLNAFWRLHKLPVWFRRFVKDSLFGAAQK HHHHCCCCEEEEEEEECCCCCCCEEEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHHH FLDGLVVKDVQMIEEEQQAYLQNPQRRNYELNRALVSVQRLMKNQAS HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSLSQAVSIHDVRQLGINLNHWYVVARSQEVTNKPLGVTLWHQAIALYRDSEGQIHALE CCHHHHHHHHHHHHHCCCCCEEEEEEECHHCCCCCCCHHHHHHHHHHEECCCCCEEEHH DRCPHRQVKLSHGQVIGNELECAYHGWRLNHHGECAAVPYLAENQKLPNCKIRHYPVKEQ HCCCCCEEEECCCEEECCCEEEEEECEEECCCCCEEECCEECCCCCCCCCEEEECCCCCC DGFIWLFPGDGEPSIEPMGLPEWDHLNYIASVAIINCQAHYSYLIENLMDMYHGHLHQDL CCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHH QAWAQAELQDIEETDERVDAHYQAQSYYKIDKIWSISQLFFPALRRLHPEPLDVSYIYPH HHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHCCCCCCCEEEECHH WMSTLGKDFKIYCLLCPINETQTKAYLIHFTSLNAFWRLHKLPVWFRRFVKDSLFGAAQK HHHHCCCCEEEEEEEECCCCCCCEEEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHHH FLDGLVVKDVQMIEEEQQAYLQNPQRRNYELNRALVSVQRLMKNQAS HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9098058 [H]