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The map label for this gene is yjgF [C]

Identifier: 75908045

GI number: 75908045

Start: 2270237

End: 2270635

Strand: Direct

Name: yjgF [C]

Synonym: Ava_1824

Alternate gene names: 75908045

Gene position: 2270237-2270635 (Clockwise)

Preceding gene: 75908044

Following gene: 75908048

Centisome position: 35.66

GC content: 43.36

Gene sequence:

>399_bases
ATGGCTCATCAAGTTATCCGTACAGATAAAGCACCTGCACCAGTGGGACCTTATAATCAAGCGATCGCCGCTTCCGGTAA
ATTACTATTCTTAGCTGGACAAATTGCCCTTGATCCCAATACTGGTACAGTTGTGGGTGAGGGAGATGTAAAACAGCAAA
CAGAACAAGTATTCGCTAATATCCAAGCAATCTTACAAGCTGCTGGGATCAAATTTTCTAATGTGGTCAAGACAACTGTA
TTCCTAGCAGATATGAATGATTTTGCTGCGGTGAATGCAGTTTACGCCAAGTATTTTGAGGAAACCACCGCGCCGGCGCG
TGCTTGTGTAGAGGTGTCACGCTTGCCAAAAGATGTATTGGTAGAAATTGAGTGTATTGCTGTGATTCCTGAAAGATAA

Upstream 100 bases:

>100_bases
TCCCAGGTTGGGCTAAACAAAGCGAAATTTGTCTGCAACCAATCGTCAAAAGCTGACACTGAGACTTCCAAATTCCCAAA
CTTAAGGCGTAATCATATCT

Downstream 100 bases:

>100_bases
TTCAAAAATCCCCGACTTTTCCAAAAAATCGGGGATTTCAATCTTTGTTCTGATTTTAGTTATGCTTTTGGTGAGCGATC
TTCATACCCTTATAGAACAA

Product: YjgF-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MAHQVIRTDKAPAPVGPYNQAIAASGKLLFLAGQIALDPNTGTVVGEGDVKQQTEQVFANIQAILQAAGIKFSNVVKTTV
FLADMNDFAAVNAVYAKYFEETTAPARACVEVSRLPKDVLVEIECIAVIPER

Sequences:

>Translated_132_residues
MAHQVIRTDKAPAPVGPYNQAIAASGKLLFLAGQIALDPNTGTVVGEGDVKQQTEQVFANIQAILQAAGIKFSNVVKTTV
FLADMNDFAAVNAVYAKYFEETTAPARACVEVSRLPKDVLVEIECIAVIPER
>Mature_131_residues
AHQVIRTDKAPAPVGPYNQAIAASGKLLFLAGQIALDPNTGTVVGEGDVKQQTEQVFANIQAILQAAGIKFSNVVKTTVF
LADMNDFAAVNAVYAKYFEETTAPARACVEVSRLPKDVLVEIECIAVIPER

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Homo sapiens, GI5032215, Length=128, Percent_Identity=45.3125, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI87082396, Length=127, Percent_Identity=51.1811023622047, Blast_Score=124, Evalue=2e-30,
Organism=Escherichia coli, GI87082213, Length=127, Percent_Identity=44.8818897637795, Blast_Score=115, Evalue=7e-28,
Organism=Escherichia coli, GI1787245, Length=129, Percent_Identity=31.0077519379845, Blast_Score=70, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI25148896, Length=129, Percent_Identity=48.062015503876, Blast_Score=114, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI71982075, Length=129, Percent_Identity=48.062015503876, Blast_Score=114, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI71982068, Length=129, Percent_Identity=48.062015503876, Blast_Score=114, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6322138, Length=123, Percent_Identity=42.2764227642276, Blast_Score=97, Evalue=8e-22,
Organism=Saccharomyces cerevisiae, GI6320899, Length=102, Percent_Identity=47.0588235294118, Blast_Score=91, Evalue=8e-20,
Organism=Drosophila melanogaster, GI19921376, Length=128, Percent_Identity=42.96875, Blast_Score=105, Evalue=6e-24,

Paralogues:

None

Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 14103; Mature: 13972

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHQVIRTDKAPAPVGPYNQAIAASGKLLFLAGQIALDPNTGTVVGEGDVKQQTEQVFAN
CCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEEEEEECCCCCEEEECCCHHHHHHHHHHH
IQAILQAAGIKFSNVVKTTVFLADMNDFAAVNAVYAKYFEETTAPARACVEVSRLPKDVL
HHHHHHHHCCCHHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHE
VEIECIAVIPER
EEEEEEEEECCC
>Mature Secondary Structure 
AHQVIRTDKAPAPVGPYNQAIAASGKLLFLAGQIALDPNTGTVVGEGDVKQQTEQVFAN
CCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEEEEEECCCCCEEEECCCHHHHHHHHHHH
IQAILQAAGIKFSNVVKTTVFLADMNDFAAVNAVYAKYFEETTAPARACVEVSRLPKDVL
HHHHHHHHCCCHHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHE
VEIECIAVIPER
EEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7787182; 8590279; 8905231 [H]