| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75676428
Identifier: 75676428
GI number: 75676428
Start: 2439403
End: 2440770
Strand: Direct
Name: 75676428
Synonym: Nwi_2243
Alternate gene names: NA
Gene position: 2439403-2440770 (Clockwise)
Preceding gene: 75676427
Following gene: 75676435
Centisome position: 71.7
GC content: 65.94
Gene sequence:
>1368_bases ATGGATATCGACCGCCGCCATATCCTCGGAGCTTCCGCCGCCGGCATCATCGGTGCGCAGGCGATGCCGGCGAATGCAGT TCGCGCGGCGCCGCTGACATCGACGCTCGGGCGCGATGCCGCTCATTACGGCGTGCGGCCCAACGCCACCGGCGACCAGA CCCGCGCGCTGCAACGGGCGATCAATGAGGCCGCGCGCGCCAACGCACCGCTCGCGCTTTCCCCCGGCGTCTATCGCACG GGACCGTTGTTGCTCGCGAAGGGATCGCAACTTGTCGGCGTGCGCGGCGCGACCACGCTCGCCTTCACCGGCGGCGCTTC GCTACTGGCAGCCGAGGGCGCGGACCACATCGGCCTCAGCGATCTCACCCTCGATGGCGGCGGCGTTCCCCTTCCCGATC GGCGCGGTCTGGTCCATTGCCTCGGCGGACGCGATGTCAGGATCATGGATTGCGCGATCACCGGCAGCGGCGGCAACGGC ATCTGGCTCGAAAATGCCGCCGGCGAGATCAGCGGCAATCTCATCGAGAAGATCGAGACGACGGGAATCGTCTCCTTCGA TGCACTCGGATTGACGATCGCGCGCAACACCATTCGCCAGACAAGGGATAACGGCATCGAGATCCTGCGCACCGCCATCG GCGACGACGGCTCGATCGTCACCGGCAACCGGATCGAGAACATCAAGGCGGGCCAGGGCGGCTCCGGCCAGCACGGCAAC GCCATCAACGCCTTCCGCGCCGGCAATGTCATCGTCAGCGGCAACCGCATCAGCGACTGCGATTACTCCGCCGTGCGCGG CAACTCGGCATCCAACATTCAGATCACCGGCAACAGCATCAGCAATGTGCGCGAGGTGGCGCTCTATTCCGAATTCGCCT TCGAGGGCGCGGTGATCGCCGGCAACACCGTGGACGGCGCGGCGGTCGGCGTCTCCGTCAGCAACTTCAACAAGGGCGGC CGGCTTGCGGTCGTGCAAGGCAACATCATCCGCAACCTGTTGCCGAAGCGACCGATCGGCACCGCGCCCGACGACGACGC CGGCATCGGCATCTATATCGAGGCGGATACGTCGGTGACCGGAAACCTCATCGAGAACGCACCGTCGTTCGGCATCATCG CGGGCTGGGGCAAATATCTCCGCGATGTCGCGATCACCGGCAATGTCATCCGTAAAACCTTCATCGGCATCGGAGTTTCG GTCGTGGACGGCGCAGGCACGGCGCTGGTCAACACCAACGTGATTTCGGATGCGCCGCGCGGCGCGGTGGTCGGACTTGA CCACGCCAGGCCCGTGACGCCGGATCTTTCCGCCGCTGGCGCCGCCAAGTTCACGCAGATCGTCATCGGCGCCAACGCGG TGCGTTGA
Upstream 100 bases:
>100_bases CGAACCGATTTCCATCCCCAGGGTCAGGCTCGGGGACATGCCTTGCTCGAAAACACGATCGACGTAAGATGCTCGCCTGC CTCAAAAGGATCCGCCATCC
Downstream 100 bases:
>100_bases AATGAGTTTCTATAGCGTTTTGAGCGAAGCAGGTCCTCGGGCCCGACCCGAGGATGGAATCCGGTTCGCGTGAAGACGAC GCGTCAGAACATAAAGACAG
Product: nitrous oxidase accessory protein
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; Pectin Lyase Fold; Parallel Beta-Helix Repeat-Containing Protein
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MDIDRRHILGASAAGIIGAQAMPANAVRAAPLTSTLGRDAAHYGVRPNATGDQTRALQRAINEAARANAPLALSPGVYRT GPLLLAKGSQLVGVRGATTLAFTGGASLLAAEGADHIGLSDLTLDGGGVPLPDRRGLVHCLGGRDVRIMDCAITGSGGNG IWLENAAGEISGNLIEKIETTGIVSFDALGLTIARNTIRQTRDNGIEILRTAIGDDGSIVTGNRIENIKAGQGGSGQHGN AINAFRAGNVIVSGNRISDCDYSAVRGNSASNIQITGNSISNVREVALYSEFAFEGAVIAGNTVDGAAVGVSVSNFNKGG RLAVVQGNIIRNLLPKRPIGTAPDDDAGIGIYIEADTSVTGNLIENAPSFGIIAGWGKYLRDVAITGNVIRKTFIGIGVS VVDGAGTALVNTNVISDAPRGAVVGLDHARPVTPDLSAAGAAKFTQIVIGANAVR
Sequences:
>Translated_455_residues MDIDRRHILGASAAGIIGAQAMPANAVRAAPLTSTLGRDAAHYGVRPNATGDQTRALQRAINEAARANAPLALSPGVYRT GPLLLAKGSQLVGVRGATTLAFTGGASLLAAEGADHIGLSDLTLDGGGVPLPDRRGLVHCLGGRDVRIMDCAITGSGGNG IWLENAAGEISGNLIEKIETTGIVSFDALGLTIARNTIRQTRDNGIEILRTAIGDDGSIVTGNRIENIKAGQGGSGQHGN AINAFRAGNVIVSGNRISDCDYSAVRGNSASNIQITGNSISNVREVALYSEFAFEGAVIAGNTVDGAAVGVSVSNFNKGG RLAVVQGNIIRNLLPKRPIGTAPDDDAGIGIYIEADTSVTGNLIENAPSFGIIAGWGKYLRDVAITGNVIRKTFIGIGVS VVDGAGTALVNTNVISDAPRGAVVGLDHARPVTPDLSAAGAAKFTQIVIGANAVR >Mature_455_residues MDIDRRHILGASAAGIIGAQAMPANAVRAAPLTSTLGRDAAHYGVRPNATGDQTRALQRAINEAARANAPLALSPGVYRT GPLLLAKGSQLVGVRGATTLAFTGGASLLAAEGADHIGLSDLTLDGGGVPLPDRRGLVHCLGGRDVRIMDCAITGSGGNG IWLENAAGEISGNLIEKIETTGIVSFDALGLTIARNTIRQTRDNGIEILRTAIGDDGSIVTGNRIENIKAGQGGSGQHGN AINAFRAGNVIVSGNRISDCDYSAVRGNSASNIQITGNSISNVREVALYSEFAFEGAVIAGNTVDGAAVGVSVSNFNKGG RLAVVQGNIIRNLLPKRPIGTAPDDDAGIGIYIEADTSVTGNLIENAPSFGIIAGWGKYLRDVAITGNVIRKTFIGIGVS VVDGAGTALVNTNVISDAPRGAVVGLDHARPVTPDLSAAGAAKFTQIVIGANAVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46313; Mature: 46313
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIDRRHILGASAAGIIGAQAMPANAVRAAPLTSTLGRDAAHYGVRPNATGDQTRALQRA CCCCCHHCCCCCCCCCCCCCCCCCCCEECCCCHHHHCCCHHHCCCCCCCCCHHHHHHHHH INEAARANAPLALSPGVYRTGPLLLAKGSQLVGVRGATTLAFTGGASLLAAEGADHIGLS HHHHHHCCCCEEECCCCCCCCCEEEECCCEEEEECCCEEEEEECCCEEEEECCCCCCCCE DLTLDGGGVPLPDRRGLVHCLGGRDVRIMDCAITGSGGNGIWLENAAGEISGNLIEKIET EEEECCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHH TGIVSFDALGLTIARNTIRQTRDNGIEILRTAIGDDGSIVTGNRIENIKAGQGGSGQHGN CCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEECCCCCCEECCCCCCCCCCC AINAFRAGNVIVSGNRISDCDYSAVRGNSASNIQITGNSISNVREVALYSEFAFEGAVIA CEEEEECCCEEEECCCCCCCCCHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCEEEE GNTVDGAAVGVSVSNFNKGGRLAVVQGNIIRNLLPKRPIGTAPDDDAGIGIYIEADTSVT CCCCCCCEEEEEECCCCCCCEEEEEECHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCC GNLIENAPSFGIIAGWGKYLRDVAITGNVIRKTFIGIGVSVVDGAGTALVNTNVISDAPR CHHHHCCCCCEEEEHHHHHHHHHHHCCHHHHHHHHHCCEEEECCCCEEEEECCCCCCCCC GAVVGLDHARPVTPDLSAAGAAKFTQIVIGANAVR CEEEECCCCCCCCCCCCCCCCHHEEEEEEECCCCC >Mature Secondary Structure MDIDRRHILGASAAGIIGAQAMPANAVRAAPLTSTLGRDAAHYGVRPNATGDQTRALQRA CCCCCHHCCCCCCCCCCCCCCCCCCCEECCCCHHHHCCCHHHCCCCCCCCCHHHHHHHHH INEAARANAPLALSPGVYRTGPLLLAKGSQLVGVRGATTLAFTGGASLLAAEGADHIGLS HHHHHHCCCCEEECCCCCCCCCEEEECCCEEEEECCCEEEEEECCCEEEEECCCCCCCCE DLTLDGGGVPLPDRRGLVHCLGGRDVRIMDCAITGSGGNGIWLENAAGEISGNLIEKIET EEEECCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHH TGIVSFDALGLTIARNTIRQTRDNGIEILRTAIGDDGSIVTGNRIENIKAGQGGSGQHGN CCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEECCCCCCEECCCCCCCCCCC AINAFRAGNVIVSGNRISDCDYSAVRGNSASNIQITGNSISNVREVALYSEFAFEGAVIA CEEEEECCCEEEECCCCCCCCCHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCEEEE GNTVDGAAVGVSVSNFNKGGRLAVVQGNIIRNLLPKRPIGTAPDDDAGIGIYIEADTSVT CCCCCCCEEEEEECCCCCCCEEEEEECHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCC GNLIENAPSFGIIAGWGKYLRDVAITGNVIRKTFIGIGVSVVDGAGTALVNTNVISDAPR CHHHHCCCCCEEEEHHHHHHHHHHHCCHHHHHHHHHCCEEEECCCCEEEEECCCCCCCCC GAVVGLDHARPVTPDLSAAGAAKFTQIVIGANAVR CEEEECCCCCCCCCCCCCCCCHHEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA