Definition Nitrobacter winogradskyi Nb-255, complete genome.
Accession NC_007406
Length 3,402,093

Click here to switch to the map view.

The map label for this gene is 75676435

Identifier: 75676435

GI number: 75676435

Start: 2446874

End: 2447680

Strand: Direct

Name: 75676435

Synonym: Nwi_2250

Alternate gene names: NA

Gene position: 2446874-2447680 (Clockwise)

Preceding gene: 75676428

Following gene: 75676436

Centisome position: 71.92

GC content: 62.83

Gene sequence:

>807_bases
GTGCTGTCGCAATCCGAGCGGCTCAGCGATGACGCGCTGATCGAGAACGTCCGCAGCAAAAGCCAGGCTCATTTGCTGGC
GATCTCCACGCGCAGAGTCTTGAGCGCCGCGGTCACCGACGCGCTGATCGAGCGGGGCAACGACGCCGTCGTCAAAAGCA
CCGTCAACAATGCCGACGCGGAATTCTCCGAATTCGGCTTCACGCGGCTGGTCGAACGCGCCGAAGGCGACGACGACATG
GCAACCTGCATCGGAATGCGGCCGTCGATCCCCCGGCATCACTATTTGAAGCTGATCGCCAAGGCCTCCGCCACGGTGCG
GGCGCGTCTCGCGGCGGCTTACCCCCAACAGGCGAACGACGTTTCGGCCGTGGTCGGCGAGGTGGCGCGGCGCGCACGCT
CGGCGCCAGAGGCGATCGGAAGGGAAACCACGATCGCGCACGGACTGGTCAGGTCGCTGTACGAAGACGGACGGCTGGAC
GAGCAGGAAGTCGCCTCGTTCGCGGAAGCCAGAAAGTTCGACGAAACCAATGCCGCCATCGCCTGCCTCGCCAACGTTTC
GATCTCAATCGCCGAAAAAATGATGGTCGAATCCGATACCGAAGGCGTCCTTATCCTGGCCAAGGTCAGCGGCCTCTCCT
GGACAACGGTGAGAACCATCATCGACATGCGCCGCGATCTGACGCAGGTCGAAGTGACGGATATCGAAGCCGCGAGACAG
ACTTACGAACGTCTGCGCCAATCCACGGCGCAGCAAGTGCTGCGGTTCCATCGAACGCAACAAGCAGTTCCGGCCGGCGA
CGGATGA

Upstream 100 bases:

>100_bases
GAAAGCACTGCTTGCCAGGCGTCTTGCTCCTGTCGCCAAGGCTCCGCCGCAGATCATTCGCGCCCTCGCCTTCGACGACC
TAATCGAAGTCGCGGCTCCG

Downstream 100 bases:

>100_bases
CCGCGGTTTCGCCGTTAAGGTCGAAAAATTCCCTTTTTCTGCCCCGGTCTGGCCACTCCCGCCGTTTCTCTTGCCGATCA
GGGACCGACAAACGGGGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MLSQSERLSDDALIENVRSKSQAHLLAISTRRVLSAAVTDALIERGNDAVVKSTVNNADAEFSEFGFTRLVERAEGDDDM
ATCIGMRPSIPRHHYLKLIAKASATVRARLAAAYPQQANDVSAVVGEVARRARSAPEAIGRETTIAHGLVRSLYEDGRLD
EQEVASFAEARKFDETNAAIACLANVSISIAEKMMVESDTEGVLILAKVSGLSWTTVRTIIDMRRDLTQVEVTDIEAARQ
TYERLRQSTAQQVLRFHRTQQAVPAGDG

Sequences:

>Translated_268_residues
MLSQSERLSDDALIENVRSKSQAHLLAISTRRVLSAAVTDALIERGNDAVVKSTVNNADAEFSEFGFTRLVERAEGDDDM
ATCIGMRPSIPRHHYLKLIAKASATVRARLAAAYPQQANDVSAVVGEVARRARSAPEAIGRETTIAHGLVRSLYEDGRLD
EQEVASFAEARKFDETNAAIACLANVSISIAEKMMVESDTEGVLILAKVSGLSWTTVRTIIDMRRDLTQVEVTDIEAARQ
TYERLRQSTAQQVLRFHRTQQAVPAGDG
>Mature_268_residues
MLSQSERLSDDALIENVRSKSQAHLLAISTRRVLSAAVTDALIERGNDAVVKSTVNNADAEFSEFGFTRLVERAEGDDDM
ATCIGMRPSIPRHHYLKLIAKASATVRARLAAAYPQQANDVSAVVGEVARRARSAPEAIGRETTIAHGLVRSLYEDGRLD
EQEVASFAEARKFDETNAAIACLANVSISIAEKMMVESDTEGVLILAKVSGLSWTTVRTIIDMRRDLTQVEVTDIEAARQ
TYERLRQSTAQQVLRFHRTQQAVPAGDG

Specific function: Unknown

COG id: COG5330

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29326; Mature: 29326

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSQSERLSDDALIENVRSKSQAHLLAISTRRVLSAAVTDALIERGNDAVVKSTVNNADA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC
EFSEFGFTRLVERAEGDDDMATCIGMRPSIPRHHYLKLIAKASATVRARLAAAYPQQAND
HHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
VSAVVGEVARRARSAPEAIGRETTIAHGLVRSLYEDGRLDEQEVASFAEARKFDETNAAI
HHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHH
ACLANVSISIAEKMMVESDTEGVLILAKVSGLSWTTVRTIIDMRRDLTQVEVTDIEAARQ
HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TYERLRQSTAQQVLRFHRTQQAVPAGDG
HHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLSQSERLSDDALIENVRSKSQAHLLAISTRRVLSAAVTDALIERGNDAVVKSTVNNADA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC
EFSEFGFTRLVERAEGDDDMATCIGMRPSIPRHHYLKLIAKASATVRARLAAAYPQQAND
HHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
VSAVVGEVARRARSAPEAIGRETTIAHGLVRSLYEDGRLDEQEVASFAEARKFDETNAAI
HHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHH
ACLANVSISIAEKMMVESDTEGVLILAKVSGLSWTTVRTIIDMRRDLTQVEVTDIEAARQ
HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TYERLRQSTAQQVLRFHRTQQAVPAGDG
HHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA