| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75676435
Identifier: 75676435
GI number: 75676435
Start: 2446874
End: 2447680
Strand: Direct
Name: 75676435
Synonym: Nwi_2250
Alternate gene names: NA
Gene position: 2446874-2447680 (Clockwise)
Preceding gene: 75676428
Following gene: 75676436
Centisome position: 71.92
GC content: 62.83
Gene sequence:
>807_bases GTGCTGTCGCAATCCGAGCGGCTCAGCGATGACGCGCTGATCGAGAACGTCCGCAGCAAAAGCCAGGCTCATTTGCTGGC GATCTCCACGCGCAGAGTCTTGAGCGCCGCGGTCACCGACGCGCTGATCGAGCGGGGCAACGACGCCGTCGTCAAAAGCA CCGTCAACAATGCCGACGCGGAATTCTCCGAATTCGGCTTCACGCGGCTGGTCGAACGCGCCGAAGGCGACGACGACATG GCAACCTGCATCGGAATGCGGCCGTCGATCCCCCGGCATCACTATTTGAAGCTGATCGCCAAGGCCTCCGCCACGGTGCG GGCGCGTCTCGCGGCGGCTTACCCCCAACAGGCGAACGACGTTTCGGCCGTGGTCGGCGAGGTGGCGCGGCGCGCACGCT CGGCGCCAGAGGCGATCGGAAGGGAAACCACGATCGCGCACGGACTGGTCAGGTCGCTGTACGAAGACGGACGGCTGGAC GAGCAGGAAGTCGCCTCGTTCGCGGAAGCCAGAAAGTTCGACGAAACCAATGCCGCCATCGCCTGCCTCGCCAACGTTTC GATCTCAATCGCCGAAAAAATGATGGTCGAATCCGATACCGAAGGCGTCCTTATCCTGGCCAAGGTCAGCGGCCTCTCCT GGACAACGGTGAGAACCATCATCGACATGCGCCGCGATCTGACGCAGGTCGAAGTGACGGATATCGAAGCCGCGAGACAG ACTTACGAACGTCTGCGCCAATCCACGGCGCAGCAAGTGCTGCGGTTCCATCGAACGCAACAAGCAGTTCCGGCCGGCGA CGGATGA
Upstream 100 bases:
>100_bases GAAAGCACTGCTTGCCAGGCGTCTTGCTCCTGTCGCCAAGGCTCCGCCGCAGATCATTCGCGCCCTCGCCTTCGACGACC TAATCGAAGTCGCGGCTCCG
Downstream 100 bases:
>100_bases CCGCGGTTTCGCCGTTAAGGTCGAAAAATTCCCTTTTTCTGCCCCGGTCTGGCCACTCCCGCCGTTTCTCTTGCCGATCA GGGACCGACAAACGGGGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MLSQSERLSDDALIENVRSKSQAHLLAISTRRVLSAAVTDALIERGNDAVVKSTVNNADAEFSEFGFTRLVERAEGDDDM ATCIGMRPSIPRHHYLKLIAKASATVRARLAAAYPQQANDVSAVVGEVARRARSAPEAIGRETTIAHGLVRSLYEDGRLD EQEVASFAEARKFDETNAAIACLANVSISIAEKMMVESDTEGVLILAKVSGLSWTTVRTIIDMRRDLTQVEVTDIEAARQ TYERLRQSTAQQVLRFHRTQQAVPAGDG
Sequences:
>Translated_268_residues MLSQSERLSDDALIENVRSKSQAHLLAISTRRVLSAAVTDALIERGNDAVVKSTVNNADAEFSEFGFTRLVERAEGDDDM ATCIGMRPSIPRHHYLKLIAKASATVRARLAAAYPQQANDVSAVVGEVARRARSAPEAIGRETTIAHGLVRSLYEDGRLD EQEVASFAEARKFDETNAAIACLANVSISIAEKMMVESDTEGVLILAKVSGLSWTTVRTIIDMRRDLTQVEVTDIEAARQ TYERLRQSTAQQVLRFHRTQQAVPAGDG >Mature_268_residues MLSQSERLSDDALIENVRSKSQAHLLAISTRRVLSAAVTDALIERGNDAVVKSTVNNADAEFSEFGFTRLVERAEGDDDM ATCIGMRPSIPRHHYLKLIAKASATVRARLAAAYPQQANDVSAVVGEVARRARSAPEAIGRETTIAHGLVRSLYEDGRLD EQEVASFAEARKFDETNAAIACLANVSISIAEKMMVESDTEGVLILAKVSGLSWTTVRTIIDMRRDLTQVEVTDIEAARQ TYERLRQSTAQQVLRFHRTQQAVPAGDG
Specific function: Unknown
COG id: COG5330
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29326; Mature: 29326
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSQSERLSDDALIENVRSKSQAHLLAISTRRVLSAAVTDALIERGNDAVVKSTVNNADA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC EFSEFGFTRLVERAEGDDDMATCIGMRPSIPRHHYLKLIAKASATVRARLAAAYPQQAND HHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH VSAVVGEVARRARSAPEAIGRETTIAHGLVRSLYEDGRLDEQEVASFAEARKFDETNAAI HHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHH ACLANVSISIAEKMMVESDTEGVLILAKVSGLSWTTVRTIIDMRRDLTQVEVTDIEAARQ HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TYERLRQSTAQQVLRFHRTQQAVPAGDG HHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLSQSERLSDDALIENVRSKSQAHLLAISTRRVLSAAVTDALIERGNDAVVKSTVNNADA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC EFSEFGFTRLVERAEGDDDMATCIGMRPSIPRHHYLKLIAKASATVRARLAAAYPQQAND HHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH VSAVVGEVARRARSAPEAIGRETTIAHGLVRSLYEDGRLDEQEVASFAEARKFDETNAAI HHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHH ACLANVSISIAEKMMVESDTEGVLILAKVSGLSWTTVRTIIDMRRDLTQVEVTDIEAARQ HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TYERLRQSTAQQVLRFHRTQQAVPAGDG HHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA