| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is aat
Identifier: 75675949
GI number: 75675949
Start: 1926936
End: 1927613
Strand: Direct
Name: aat
Synonym: Nwi_1757
Alternate gene names: 75675949
Gene position: 1926936-1927613 (Clockwise)
Preceding gene: 75675948
Following gene: 75675951
Centisome position: 56.64
GC content: 65.93
Gene sequence:
>678_bases ATGTCCCGCGAGACCGCCTCGTCCGAGATCACGCCCGAACTGCTGCTGCGCGCCTATGCCTGCGGCATTTTTCCGATGGC GGAGAGTGTCGACGACCCGACGCTGTTCTGGGTCGAGCCGAAGATGCGCGGCGTGGTTCCACTCGAGAGCTTTCGAATTC CGTCGCGGCTCGCGCGCACCGTTCGATCGGACAGTTTCACGGTGACCGTCGATACCGCATTCGACGCGGTGATCAACGGC TGCGCCGCGCCCCAACCCGGCCGCAACAACACCTGGATCAACCATCGAATCCGTGAACTCTATATCGGCCTGCACGAACT CGGCCACTGCCACAGTGTCGAGGTCTGGCGGGACAATGAACTGGCCGGCGGCCTTTACGGCGTCAGGCTCGGCCGGGCGT TTTTCGGCGAGAGCATGTTCCATGTCGTGCGGGACGCGTCGAAGGTCGCGCTCGTGCATCTGGTCGCCCGGTTGATCGCC GGAGGCTTCGTGCTGCTCGACACGCAGTTCGTCACCGACCATCTGCGGGGGTTCGGCGCCATCGAAATCCCGCGCCGGCG CTACCGGGCGCTACTCGACGTCGCGCTGGAAGGCCGGGCCGATTTCGGAGCGCTGCCGCTCGACCGGCCGGTGCCGGGCG CAGAAGCGCTCAAGGCCATCGCCGACCGAAGCTCTTAG
Upstream 100 bases:
>100_bases AACCGACATCATCTCTCGGCACGCGATCTCCACTTGATCGCATCATTCGCTGGTAGATTATCGACGCGGAAACCTTCCAG CTCTGCTATAAGATAACCGG
Downstream 100 bases:
>100_bases AGCATGATCCCGACCCGAAGGGCCGCGCCAGCGCAAAGTAGGAACCGGCAGCCTTTTCTGATGGAATCAGAAACGAGGCT TGCGGATTTTGATCCGGCGC
Product: leucyl/phenylalanyl-tRNA--protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MSRETASSEITPELLLRAYACGIFPMAESVDDPTLFWVEPKMRGVVPLESFRIPSRLARTVRSDSFTVTVDTAFDAVING CAAPQPGRNNTWINHRIRELYIGLHELGHCHSVEVWRDNELAGGLYGVRLGRAFFGESMFHVVRDASKVALVHLVARLIA GGFVLLDTQFVTDHLRGFGAIEIPRRRYRALLDVALEGRADFGALPLDRPVPGAEALKAIADRSS
Sequences:
>Translated_225_residues MSRETASSEITPELLLRAYACGIFPMAESVDDPTLFWVEPKMRGVVPLESFRIPSRLARTVRSDSFTVTVDTAFDAVING CAAPQPGRNNTWINHRIRELYIGLHELGHCHSVEVWRDNELAGGLYGVRLGRAFFGESMFHVVRDASKVALVHLVARLIA GGFVLLDTQFVTDHLRGFGAIEIPRRRYRALLDVALEGRADFGALPLDRPVPGAEALKAIADRSS >Mature_224_residues SRETASSEITPELLLRAYACGIFPMAESVDDPTLFWVEPKMRGVVPLESFRIPSRLARTVRSDSFTVTVDTAFDAVINGC AAPQPGRNNTWINHRIRELYIGLHELGHCHSVEVWRDNELAGGLYGVRLGRAFFGESMFHVVRDASKVALVHLVARLIAG GFVLLDTQFVTDHLRGFGAIEIPRRRYRALLDVALEGRADFGALPLDRPVPGAEALKAIADRSS
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family
Homologues:
Organism=Escherichia coli, GI1787111, Length=191, Percent_Identity=43.979057591623, Blast_Score=146, Evalue=1e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LFTR_NITWN (Q3SRS3)
Other databases:
- EMBL: CP000115 - RefSeq: YP_318370.1 - HSSP: P0A8P1 - ProteinModelPortal: Q3SRS3 - SMR: Q3SRS3 - STRING: Q3SRS3 - GeneID: 3676480 - GenomeReviews: CP000115_GR - KEGG: nwi:Nwi_1757 - NMPDR: fig|323098.3.peg.1549 - eggNOG: COG2360 - HOGENOM: HBG485363 - OMA: GEPILWW - PhylomeDB: Q3SRS3 - ProtClustDB: PRK00301 - BioCyc: NWIN323098:NWI_1757-MONOMER - GO: GO:0005737 - HAMAP: MF_00688 - InterPro: IPR016181 - InterPro: IPR004616 - TIGRFAMs: TIGR00667
Pfam domain/function: PF03588 Leu_Phe_trans; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.6
Molecular weight: Translated: 24882; Mature: 24751
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRETASSEITPELLLRAYACGIFPMAESVDDPTLFWVEPKMRGVVPLESFRIPSRLART CCCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCEEEEECCCCCCCCCHHHHCCHHHHHHH VRSDSFTVTVDTAFDAVINGCAAPQPGRNNTWINHRIRELYIGLHELGHCHSVEVWRDNE HCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCC LAGGLYGVRLGRAFFGESMFHVVRDASKVALVHLVARLIAGGFVLLDTQFVTDHLRGFGA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCC IEIPRRRYRALLDVALEGRADFGALPLDRPVPGAEALKAIADRSS EECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure SRETASSEITPELLLRAYACGIFPMAESVDDPTLFWVEPKMRGVVPLESFRIPSRLART CCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCEEEEECCCCCCCCCHHHHCCHHHHHHH VRSDSFTVTVDTAFDAVINGCAAPQPGRNNTWINHRIRELYIGLHELGHCHSVEVWRDNE HCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCC LAGGLYGVRLGRAFFGESMFHVVRDASKVALVHLVARLIAGGFVLLDTQFVTDHLRGFGA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCC IEIPRRRYRALLDVALEGRADFGALPLDRPVPGAEALKAIADRSS EECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA