| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75675951
Identifier: 75675951
GI number: 75675951
Start: 1929123
End: 1930931
Strand: Direct
Name: 75675951
Synonym: Nwi_1759
Alternate gene names: NA
Gene position: 1929123-1930931 (Clockwise)
Preceding gene: 75675949
Following gene: 75675953
Centisome position: 56.7
GC content: 63.29
Gene sequence:
>1809_bases ATGACCCGGGCGGGGGCGCATTGGATCGCGATGACGGCGGCGGCTCTGGCGCTCGGGGGCGCGGCGGCGCAGGCTCAGCA GGTCGGCACGGCATCGGCGGTCAATCCCGCCGCCACCGCCAACCTGAAGACCATCACCATCGGCCAGTCGATCGCCCACA AGGAGCGTATCCAGACCAGGTCAAGCGGCTCGGTGCAGTTGCTGTTTCTCGACAAGACGTCGATGACCATCGGCCCGAAC AGCGACCTCACAATCGATGAATACGTCTATGACCCCAACGCCAACACCGGCAAACTGGCGGCCACGCTCGGCAAGGGCGC GCTGCGTTTCGTAGGCGGCCAGATCAGCCACAGCGGCGACGCGGAAATCAAGACCGGAACGGCCTTGATCGGCATTCGCG GCGGCGTGATGATGACCGACGGCAAGGGCGGCATCTATGCCGGCTACGGCAGAATGACTGTCTCATCCGGCGGCCAGACC GTCACCCTCGGCGCCGGCGAATTCACCCAGACGCAAGCCGGCGGCCCCCCTTCGCCCCCCGGCCTGCCGCCGCCAGGGTT CGTGCAGCAGTTGATCGCATCGTTCCAGAGCGCCGCCGGTCAAACGGGCGGTGCGCGCGCGGGCTCGGCTTCGGCGAAGA ATGTCGCCGCCGCCGAGCACAAGGCGACCGGATCACCCGGCGGACTGGTGACCGGCTCGGGTGCTCCGCCCTCTCCCAAC CCGCCCACCATTATCCAGCAGATCAATGCGATTACGTCAGCCTTCACGGAAGCGATCCAGACATCCAATCAGGTGACCGG GGCGCAGCAGATCGCGCATGATCATCCGCCCGGCGGCGACCACCCTCCCCCGACGAACAATATCCCGCCTCCGACAAACA ACAATCCGCCCGGGCCGCTGCGCGGGTATGTCGGCGGATTGGTCTACACAAGCTCAAGTGAGGGCGAATATTACTCGAGT CACGGTGAGAACGGTGAGCATGGCGTAAGCTACGAAGGCCCGACCAATATCGATCCCGTCACCGGAACCGCCGAAATCAC CCTCGACACCGCCAACAAGCGCGTCCAGGCTCGTCTGGACACCTACCGTTACGATCAGAACAACCCGTTCACGCAACTCA CCGAGACGATGCACGAGTTGTTTCAGTTCGGATCCAAGGGATCGACCGGCCCCGCTGACAGCGTCTATGTAGACAAAGAT AATTTCTACGCGAACACGCCCGAGAACCACGAGGTCAACGGCAAGAAGGTCAGCGGCATTCTGGTTTCCGGCAACGGCAT CGCGACACACGAGGTCGTTGCCGATGCAATTCCGAACCTGACACCGTGCCAGTGTGACTACACACGCTGGGGTTTCTGGA TGGCTGATGAAAGCGATACCAGCACCAGTGCGCCTACATCATATAAGACAACCGTCGGCACCTGGGTCGCCGGTCGGCCC GTGGGCAGTATCGGCGACGTGCCGACGACAGGCGCCGCAACCTACACCGGCCATGTCGTCGCCAATGTGAATAATGCAGG ATTCGTCGCCGGCGGGTTCTCGAACACCGTCAATTTCGGGGCGCGCACTGGCGCGGTGAGCGTGACCAATCTCGACGGCA CGAACTATTCCGGCACCGTGAACTTCAACACCGACCCGCGCAATTTCGGCGGCACGCTCAACGGCGATACCGGCAGCCGT CAGATGGCCATCGACGGCAGCTTTTTCCAGGGCGTGAATAACCCAGTCGGCGAGATGGGCGGACGGGTCGGAATCTCCGG CGCCGACGGCTATCTCGGCAGCGGCATTTTCGCGGCTACCAAACAGTGA
Upstream 100 bases:
>100_bases TGCGGATCGTGACCTGGTAGACGATCTGGGGTTGGCGCATTCGGATTATTCAAGAGTATACTTGGCCGGACTTTGTCTGT TCTGAGTGTCAGGAGTTGCC
Downstream 100 bases:
>100_bases CAGCACCCGCGTAAATGCTGGTGCGTCCCCGCGCTGGATGCGGGTGTTTCTACTGGCCGGGCGTCCAGGGCTGATAATCG CCGGTCGCCTTCGGACGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 602; Mature: 601
Protein sequence:
>602_residues MTRAGAHWIAMTAAALALGGAAAQAQQVGTASAVNPAATANLKTITIGQSIAHKERIQTRSSGSVQLLFLDKTSMTIGPN SDLTIDEYVYDPNANTGKLAATLGKGALRFVGGQISHSGDAEIKTGTALIGIRGGVMMTDGKGGIYAGYGRMTVSSGGQT VTLGAGEFTQTQAGGPPSPPGLPPPGFVQQLIASFQSAAGQTGGARAGSASAKNVAAAEHKATGSPGGLVTGSGAPPSPN PPTIIQQINAITSAFTEAIQTSNQVTGAQQIAHDHPPGGDHPPPTNNIPPPTNNNPPGPLRGYVGGLVYTSSSEGEYYSS HGENGEHGVSYEGPTNIDPVTGTAEITLDTANKRVQARLDTYRYDQNNPFTQLTETMHELFQFGSKGSTGPADSVYVDKD NFYANTPENHEVNGKKVSGILVSGNGIATHEVVADAIPNLTPCQCDYTRWGFWMADESDTSTSAPTSYKTTVGTWVAGRP VGSIGDVPTTGAATYTGHVVANVNNAGFVAGGFSNTVNFGARTGAVSVTNLDGTNYSGTVNFNTDPRNFGGTLNGDTGSR QMAIDGSFFQGVNNPVGEMGGRVGISGADGYLGSGIFAATKQ
Sequences:
>Translated_602_residues MTRAGAHWIAMTAAALALGGAAAQAQQVGTASAVNPAATANLKTITIGQSIAHKERIQTRSSGSVQLLFLDKTSMTIGPN SDLTIDEYVYDPNANTGKLAATLGKGALRFVGGQISHSGDAEIKTGTALIGIRGGVMMTDGKGGIYAGYGRMTVSSGGQT VTLGAGEFTQTQAGGPPSPPGLPPPGFVQQLIASFQSAAGQTGGARAGSASAKNVAAAEHKATGSPGGLVTGSGAPPSPN PPTIIQQINAITSAFTEAIQTSNQVTGAQQIAHDHPPGGDHPPPTNNIPPPTNNNPPGPLRGYVGGLVYTSSSEGEYYSS HGENGEHGVSYEGPTNIDPVTGTAEITLDTANKRVQARLDTYRYDQNNPFTQLTETMHELFQFGSKGSTGPADSVYVDKD NFYANTPENHEVNGKKVSGILVSGNGIATHEVVADAIPNLTPCQCDYTRWGFWMADESDTSTSAPTSYKTTVGTWVAGRP VGSIGDVPTTGAATYTGHVVANVNNAGFVAGGFSNTVNFGARTGAVSVTNLDGTNYSGTVNFNTDPRNFGGTLNGDTGSR QMAIDGSFFQGVNNPVGEMGGRVGISGADGYLGSGIFAATKQ >Mature_601_residues TRAGAHWIAMTAAALALGGAAAQAQQVGTASAVNPAATANLKTITIGQSIAHKERIQTRSSGSVQLLFLDKTSMTIGPNS DLTIDEYVYDPNANTGKLAATLGKGALRFVGGQISHSGDAEIKTGTALIGIRGGVMMTDGKGGIYAGYGRMTVSSGGQTV TLGAGEFTQTQAGGPPSPPGLPPPGFVQQLIASFQSAAGQTGGARAGSASAKNVAAAEHKATGSPGGLVTGSGAPPSPNP PTIIQQINAITSAFTEAIQTSNQVTGAQQIAHDHPPGGDHPPPTNNIPPPTNNNPPGPLRGYVGGLVYTSSSEGEYYSSH GENGEHGVSYEGPTNIDPVTGTAEITLDTANKRVQARLDTYRYDQNNPFTQLTETMHELFQFGSKGSTGPADSVYVDKDN FYANTPENHEVNGKKVSGILVSGNGIATHEVVADAIPNLTPCQCDYTRWGFWMADESDTSTSAPTSYKTTVGTWVAGRPV GSIGDVPTTGAATYTGHVVANVNNAGFVAGGFSNTVNFGARTGAVSVTNLDGTNYSGTVNFNTDPRNFGGTLNGDTGSRQ MAIDGSFFQGVNNPVGEMGGRVGISGADGYLGSGIFAATKQ
Specific function: Unknown
COG id: COG4254
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61521; Mature: 61390
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRAGAHWIAMTAAALALGGAAAQAQQVGTASAVNPAATANLKTITIGQSIAHKERIQTR CCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHCCEEEEECCHHHHHHHHHHHC SSGSVQLLFLDKTSMTIGPNSDLTIDEYVYDPNANTGKLAATLGKGALRFVGGQISHSGD CCCCEEEEEEECCEEEECCCCCCEEEEEEECCCCCCCCEEEECCCCCEEEECCCCCCCCC AEIKTGTALIGIRGGVMMTDGKGGIYAGYGRMTVSSGGQTVTLGAGEFTQTQAGGPPSPP CEEECCEEEEEECCCEEEECCCCCEEECCCEEEEECCCCEEEEECCCCCCCCCCCCCCCC GLPPPGFVQQLIASFQSAAGQTGGARAGSASAKNVAAAEHKATGSPGGLVTGSGAPPSPN CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEECCCCCCCCC PPTIIQQINAITSAFTEAIQTSNQVTGAQQIAHDHPPGGDHPPPTNNIPPPTNNNPPGPL CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCH RGYVGGLVYTSSSEGEYYSSHGENGEHGVSYEGPTNIDPVTGTAEITLDTANKRVQARLD HHHCCEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEHH TYRYDQNNPFTQLTETMHELFQFGSKGSTGPADSVYVDKDNFYANTPENHEVNGKKVSGI HEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEECCCCCCCCCCCEEEEEE LVSGNGIATHEVVADAIPNLTPCQCDYTRWGFWMADESDTSTSAPTSYKTTVGTWVAGRP EEECCCCCHHHHHHHHCCCCCCCEECCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCC VGSIGDVPTTGAATYTGHVVANVNNAGFVAGGFSNTVNFGARTGAVSVTNLDGTNYSGTV CCCCCCCCCCCCEEEECEEEEECCCCCEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEE NFNTDPRNFGGTLNGDTGSRQMAIDGSFFQGVNNPVGEMGGRVGISGADGYLGSGIFAAT EECCCCHHCCCEECCCCCCCEEEECCHHHHCCCCCHHHCCCEEEECCCCCCCCCCEEEEC KQ CC >Mature Secondary Structure TRAGAHWIAMTAAALALGGAAAQAQQVGTASAVNPAATANLKTITIGQSIAHKERIQTR CCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHCCEEEEECCHHHHHHHHHHHC SSGSVQLLFLDKTSMTIGPNSDLTIDEYVYDPNANTGKLAATLGKGALRFVGGQISHSGD CCCCEEEEEEECCEEEECCCCCCEEEEEEECCCCCCCCEEEECCCCCEEEECCCCCCCCC AEIKTGTALIGIRGGVMMTDGKGGIYAGYGRMTVSSGGQTVTLGAGEFTQTQAGGPPSPP CEEECCEEEEEECCCEEEECCCCCEEECCCEEEEECCCCEEEEECCCCCCCCCCCCCCCC GLPPPGFVQQLIASFQSAAGQTGGARAGSASAKNVAAAEHKATGSPGGLVTGSGAPPSPN CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEECCCCCCCCC PPTIIQQINAITSAFTEAIQTSNQVTGAQQIAHDHPPGGDHPPPTNNIPPPTNNNPPGPL CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCH RGYVGGLVYTSSSEGEYYSSHGENGEHGVSYEGPTNIDPVTGTAEITLDTANKRVQARLD HHHCCEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEHH TYRYDQNNPFTQLTETMHELFQFGSKGSTGPADSVYVDKDNFYANTPENHEVNGKKVSGI HEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEECCCCCCCCCCCEEEEEE LVSGNGIATHEVVADAIPNLTPCQCDYTRWGFWMADESDTSTSAPTSYKTTVGTWVAGRP EEECCCCCHHHHHHHHCCCCCCCEECCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCC VGSIGDVPTTGAATYTGHVVANVNNAGFVAGGFSNTVNFGARTGAVSVTNLDGTNYSGTV CCCCCCCCCCCCEEEECEEEEECCCCCEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEE NFNTDPRNFGGTLNGDTGSRQMAIDGSFFQGVNNPVGEMGGRVGISGADGYLGSGIFAAT EECCCCHHCCCEECCCCCCCEEEECCHHHHCCCCCHHHCCCEEEECCCCCCCCCCEEEEC KQ CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA