| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is accB [H]
Identifier: 75675944
GI number: 75675944
Start: 1921685
End: 1922170
Strand: Direct
Name: accB [H]
Synonym: Nwi_1752
Alternate gene names: 75675944
Gene position: 1921685-1922170 (Clockwise)
Preceding gene: 75675943
Following gene: 75675945
Centisome position: 56.49
GC content: 64.81
Gene sequence:
>486_bases ATGTCCCGCCAGCCCGGAGAACCCGCAAAAAACAAAACCGGCAACGATCTGCGCGAGGAGAGCGACGTGATCCGCGAACT CGCCGCCCTGCTCGACGAAACCAGGCTCACGGAGATCGAAATCGAGCGTGATGGACTTCGTGTCCGTGTGGCACGCAACG TCACCGTCGGGGCAGCGATACCGGCCACCTATCAGGCCGCGCCGGCGCCAGCCCCCTCGCCGGCCGCAGGCGCGGCCGAC ATCAGCAAGCATCCCGGCATGGTTCCATCGCCGATGGTCGGAACGGCCTATTGGGCGTCGGAACCGGGCGCAAAACCCTT CATCGAGGTCGGGTCCAAGGTCACCGCAGGCCAGACGCTGCTGATCATCGAGGCCATGAAGACCATGAACCAGATCCCGT CGCCGCGCTCCGGCACCGTCACGCAGATTCTCGTCGAGGATGGCCAGCCCGTCGAGTTCGGCGAGCCGCTGGTCATCATT GAATGA
Upstream 100 bases:
>100_bases TCAATGGCCTTGCCGCCAAGATCGGCGCGGTAGACCCGTCGAACAAAGTTAAATCCTGACACATCAGCGTCATTCTCACA GAAAGTTTCGGATCGAGATC
Downstream 100 bases:
>100_bases CGCCGTTCGAACCGCGGACGCAGTGATGTTCGATAAGATCCTGATAGCCAATCGCGGCGAGATCGCCCTGCGCATCCTGC GCGCCTGCAAGGAGCTGGGT
Product: acetyl-CoA biotin carboxyl carrier
Products: Malonyl-CoA; malonyl-CoA; phosphate; ADP [C]
Alternate protein names: BCCP [H]
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MSRQPGEPAKNKTGNDLREESDVIRELAALLDETRLTEIEIERDGLRVRVARNVTVGAAIPATYQAAPAPAPSPAAGAAD ISKHPGMVPSPMVGTAYWASEPGAKPFIEVGSKVTAGQTLLIIEAMKTMNQIPSPRSGTVTQILVEDGQPVEFGEPLVII E
Sequences:
>Translated_161_residues MSRQPGEPAKNKTGNDLREESDVIRELAALLDETRLTEIEIERDGLRVRVARNVTVGAAIPATYQAAPAPAPSPAAGAAD ISKHPGMVPSPMVGTAYWASEPGAKPFIEVGSKVTAGQTLLIIEAMKTMNQIPSPRSGTVTQILVEDGQPVEFGEPLVII E >Mature_160_residues SRQPGEPAKNKTGNDLREESDVIRELAALLDETRLTEIEIERDGLRVRVARNVTVGAAIPATYQAAPAPAPSPAAGAADI SKHPGMVPSPMVGTAYWASEPGAKPFIEVGSKVTAGQTLLIIEAMKTMNQIPSPRSGTVTQILVEDGQPVEFGEPLVIIE
Specific function: This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA [H]
COG id: COG0511
COG function: function code I; Biotin carboxyl carrier protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotinyl-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1789653, Length=162, Percent_Identity=47.5308641975309, Blast_Score=118, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001249 - InterPro: IPR001882 - InterPro: IPR000089 - InterPro: IPR011053 [H]
Pfam domain/function: PF00364 Biotin_lipoyl [H]
EC number: NA
Molecular weight: Translated: 17037; Mature: 16905
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRQPGEPAKNKTGNDLREESDVIRELAALLDETRLTEIEIERDGLRVRVARNVTVGAAI CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCEEECCCC PATYQAAPAPAPSPAAGAADISKHPGMVPSPMVGTAYWASEPGAKPFIEVGSKVTAGQTL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHCCCCCCCCCCH LIIEAMKTMNQIPSPRSGTVTQILVEDGQPVEFGEPLVIIE HHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEC >Mature Secondary Structure SRQPGEPAKNKTGNDLREESDVIRELAALLDETRLTEIEIERDGLRVRVARNVTVGAAI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCEEECCCC PATYQAAPAPAPSPAAGAADISKHPGMVPSPMVGTAYWASEPGAKPFIEVGSKVTAGQTL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHCCCCCCCCCCH LIIEAMKTMNQIPSPRSGTVTQILVEDGQPVEFGEPLVIIE HHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Acetyl-CoA; HCO3-; Proton; acetyl-CoA; ATP [C]
Specific reaction: acetyl-CoA = malonyl-CoA HCO3- + Proton + acetyl-CoA + ATP = malonyl-CoA + phosphate + ADP [C]
General reaction: Ligases; Forming Carbon-Carbon Bonds; acetyl-CoA carboxylase Reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]