| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is yjgP [C]
Identifier: 75675869
GI number: 75675869
Start: 1828078
End: 1829250
Strand: Direct
Name: yjgP [C]
Synonym: Nwi_1677
Alternate gene names: 75675869
Gene position: 1828078-1829250 (Clockwise)
Preceding gene: 75675865
Following gene: 75675870
Centisome position: 53.73
GC content: 58.99
Gene sequence:
>1173_bases ATGGGGTCGATCGACAAGTATATTTTCCGGACGACGCTGGCGTCGTTTGTCGTGGTTCTGGTCAGCCTGACGGGGGTGAT CTGGATTACGCAAGCGTTGCGCGGGATCGACCTGATGACAAGTCAGGGGCAGACCATCCTGACGTTCCTGGGAATCACCA GCCTTGCTATCCCGGTGCTGGTGCTGATCATTTCTCCGATCGCACTGATGATCGCGGTCTCGCACACGCTTCACAAGCTG GCGACGGACTCGGAAATCATCGTGATGAACGCCGCTGGCCTGTCGCCGTTCCGGCTCTTCCGGCCGTTTCTTTATGCAAC GGTGGTCGTGGCTCTGCTGGTGGCCTTCATTGCCGCCTACCTCGCACCTGACGGCATGCGCCGGTTGAAACAATGGGACG CCGAGATCACCGCCGATGTTCTGGCGAACGTTCTGCAGCCGGGCAGATTTGCGCAGCTCGATCCGAATCTGACGATCCGC ATTCGTGAACGACAGCCGGGTGGCCAGCTCGCCGGAATCTTCATCGATGACCGCCGTAATTCGAATGAGCGCCTCAGTAT CATCGCCGACCACGGAACGGTGATGAAGAACGACCAGGGATCGTTCCTCATCCTGGAAGACGGACACCTGGAGAGATTCG AAACCGGCAAGCGCGAGCCGGCCATGGTCGCGTTCGACCGCTATGCTTTCGACATGTCGAAATTTTCCAATCGGGGGCAT GACGTCGTTTATGGCATTCGCGAACGCTACCTTTGGGAGTTGATTGCTCCCGATGAGAAAGATCCGCTGGTTCAGCAACT GCGCGGCCAGTTCCGCGCCGAGCTTCATGATCGATTCACCGCGCCGATCTATCCGTTTGCTTTTGCCGCGCTGACCTTCG CGTTCCTCGGATCACCGCGCACCACGCGTCAGAGTCGTAATTTCTCCATGGGAGCCGCAATCGCGGCCGTGTTCGGCCTT CGTATGGCGGGCTTCGCGCTTTCGGTCATGACAGTGAAATCGCCGATGGCGGCGCTCCTGCAGTATCTGCTTCTGTTCGG CGCGATCGGTATCAGCCTGAGGGTGATCATTGCGGGAATCGTGCTCGAACCGCCCGCAGCGTTGATGGAAGCGATCAACA GATCGAACGCGCGGATCCTTCGCCTGCTGCGGAAGAGGCCGGCTTTCGCATGA
Upstream 100 bases:
>100_bases CGAGTCAGATAAGAACAAGGCGGGACATTGGGGATGTCCCGGCCGCGGTCCGGCCTTGCCGGATATTTCCGCGTGAAGGG ATTGGGGATCGTTCAGACCG
Downstream 100 bases:
>100_bases GCATGTTGACGAACACGTTGGGGCGTTATTTTGCCGGCCGTTTCATGGTGGCGGCGCTTGGCGTGTTCGCCAGCATTTTC CTGCTGCTCGTTCTCGTCGA
Product: permease YjgP/YjgQ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MGSIDKYIFRTTLASFVVVLVSLTGVIWITQALRGIDLMTSQGQTILTFLGITSLAIPVLVLIISPIALMIAVSHTLHKL ATDSEIIVMNAAGLSPFRLFRPFLYATVVVALLVAFIAAYLAPDGMRRLKQWDAEITADVLANVLQPGRFAQLDPNLTIR IRERQPGGQLAGIFIDDRRNSNERLSIIADHGTVMKNDQGSFLILEDGHLERFETGKREPAMVAFDRYAFDMSKFSNRGH DVVYGIRERYLWELIAPDEKDPLVQQLRGQFRAELHDRFTAPIYPFAFAALTFAFLGSPRTTRQSRNFSMGAAIAAVFGL RMAGFALSVMTVKSPMAALLQYLLLFGAIGISLRVIIAGIVLEPPAALMEAINRSNARILRLLRKRPAFA
Sequences:
>Translated_390_residues MGSIDKYIFRTTLASFVVVLVSLTGVIWITQALRGIDLMTSQGQTILTFLGITSLAIPVLVLIISPIALMIAVSHTLHKL ATDSEIIVMNAAGLSPFRLFRPFLYATVVVALLVAFIAAYLAPDGMRRLKQWDAEITADVLANVLQPGRFAQLDPNLTIR IRERQPGGQLAGIFIDDRRNSNERLSIIADHGTVMKNDQGSFLILEDGHLERFETGKREPAMVAFDRYAFDMSKFSNRGH DVVYGIRERYLWELIAPDEKDPLVQQLRGQFRAELHDRFTAPIYPFAFAALTFAFLGSPRTTRQSRNFSMGAAIAAVFGL RMAGFALSVMTVKSPMAALLQYLLLFGAIGISLRVIIAGIVLEPPAALMEAINRSNARILRLLRKRPAFA >Mature_389_residues GSIDKYIFRTTLASFVVVLVSLTGVIWITQALRGIDLMTSQGQTILTFLGITSLAIPVLVLIISPIALMIAVSHTLHKLA TDSEIIVMNAAGLSPFRLFRPFLYATVVVALLVAFIAAYLAPDGMRRLKQWDAEITADVLANVLQPGRFAQLDPNLTIRI RERQPGGQLAGIFIDDRRNSNERLSIIADHGTVMKNDQGSFLILEDGHLERFETGKREPAMVAFDRYAFDMSKFSNRGHD VVYGIRERYLWELIAPDEKDPLVQQLRGQFRAELHDRFTAPIYPFAFAALTFAFLGSPRTTRQSRNFSMGAAIAAVFGLR MAGFALSVMTVKSPMAALLQYLLLFGAIGISLRVIIAGIVLEPPAALMEAINRSNARILRLLRKRPAFA
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005495 [H]
Pfam domain/function: PF03739 YjgP_YjgQ [H]
EC number: NA
Molecular weight: Translated: 43221; Mature: 43090
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSIDKYIFRTTLASFVVVLVSLTGVIWITQALRGIDLMTSQGQTILTFLGITSLAIPVL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHH VLIISPIALMIAVSHTLHKLATDSEIIVMNAAGLSPFRLFRPFLYATVVVALLVAFIAAY HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LAPDGMRRLKQWDAEITADVLANVLQPGRFAQLDPNLTIRIRERQPGGQLAGIFIDDRRN HCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEECCCCCCEEEEEEECCCC SNERLSIIADHGTVMKNDQGSFLILEDGHLERFETGKREPAMVAFDRYAFDMSKFSNRGH CCCEEEEEECCCCEEECCCCCEEEEECCCCHHHHCCCCCCCEEEHHHHHHHHHHHCCCCC DVVYGIRERYLWELIAPDEKDPLVQQLRGQFRAELHDRFTAPIYPFAFAALTFAFLGSPR HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC TTRQSRNFSMGAAIAAVFGLRMAGFALSVMTVKSPMAALLQYLLLFGAIGISLRVIIAGI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLEPPAALMEAINRSNARILRLLRKRPAFA HCCCHHHHHHHHCCCHHHHHHHHHHCCCCC >Mature Secondary Structure GSIDKYIFRTTLASFVVVLVSLTGVIWITQALRGIDLMTSQGQTILTFLGITSLAIPVL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHH VLIISPIALMIAVSHTLHKLATDSEIIVMNAAGLSPFRLFRPFLYATVVVALLVAFIAAY HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LAPDGMRRLKQWDAEITADVLANVLQPGRFAQLDPNLTIRIRERQPGGQLAGIFIDDRRN HCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEECCCCCCEEEEEEECCCC SNERLSIIADHGTVMKNDQGSFLILEDGHLERFETGKREPAMVAFDRYAFDMSKFSNRGH CCCEEEEEECCCCEEECCCCCEEEEECCCCHHHHCCCCCCCEEEHHHHHHHHHHHCCCCC DVVYGIRERYLWELIAPDEKDPLVQQLRGQFRAELHDRFTAPIYPFAFAALTFAFLGSPR HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC TTRQSRNFSMGAAIAAVFGLRMAGFALSVMTVKSPMAALLQYLLLFGAIGISLRVIIAGI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLEPPAALMEAINRSNARILRLLRKRPAFA HCCCHHHHHHHHCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]