| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is lptG [H]
Identifier: 75675870
GI number: 75675870
Start: 1829247
End: 1830344
Strand: Direct
Name: lptG [H]
Synonym: Nwi_1678
Alternate gene names: 75675870
Gene position: 1829247-1830344 (Clockwise)
Preceding gene: 75675869
Following gene: 75675871
Centisome position: 53.77
GC content: 59.74
Gene sequence:
>1098_bases ATGAGCATGTTGACGAACACGTTGGGGCGTTATTTTGCCGGCCGTTTCATGGTGGCGGCGCTTGGCGTGTTCGCCAGCAT TTTCCTGCTGCTCGTTCTCGTCGATTATATTGAAATGGTCCGGAGAACATCAGGACTTGCGTCGGCATCGGCGCTCATGG TGGCGGAAACGTCGCTGTTCAGGGTGCCTCAACTCCTTGAGAAGCTGACCCCGTTCTGCGTTCTGATCGGCGCCATGACT TGCTATCTCGCATTGTCGCGGAAGCTTGAGCTGGTGGTGGCCCGCGCCGCCGGCGTTTCGGCGTGGCAGTTCATCTCGCC GACGCTGGCCTGCGCGATCGCGCTCGGCGTTTTCGCGACCACGGTTTACAATCCCTTGTCTTCCAACCTGCGTGAATTGT CGAAGCGGATGGAGGCCGAAATGTTCGGCGGCGCGTCGGGCGGAGGTCTCCATGACGCATCGGGCTTCTGGATCAACCAG GTGACCGACGACGGCCAGGCGATCATCAACGCCGCGCTCAGTGAGCAGCAGGGCGTGCGCTTGACGGGACTCACGGTGTT CCGGTTCGATCCCGATTCCAGGTTCAGGGAGCGTATCGAGGCGCGGGAAGCCGCCCTGGAGGACGGCCGCTGGCTGTTCA AAGGCGTCCGCCGGTTCACGCTCGATAACCCTCCGGTCGAGCAGGAAACTTTTGTGCTCCCGACCAGCCTGACGCCGGCG CAGGTTCAGAACAGTTTCTCCACGCCCGAAACTGTGTCATTTTGGCAACTGCCGGACTATATCCGATCCTCCGAAAGTTC GGGGTTTGCCACAGCGGGATACCGGCTGCAGTATCACAAACTCATCGCACAGCCGTTTTTGCTGGCTGCCATGGTGATGC TGGCGGCCTCGGTAAGCCTCCGGTTCTTCCGCTTCGGCGGGGTGCAAAAGATGGTTTTAAGTGGCGTGGGTTCCGGCTTT CTGCTCTATGTCCTATCCAAGGTAACTGAGGATTTGAGCAAGGCCGAATTGATGAATCCAATCGCCGCGGCATGGCTGCC GGTTTGCGTCGGCGGCCTTACCGGTTTTTTGGTCTTGCTGCACCAGGAGGACGGATAG
Upstream 100 bases:
>100_bases TTGCGGGAATCGTGCTCGAACCGCCCGCAGCGTTGATGGAAGCGATCAACAGATCGAACGCGCGGATCCTTCGCCTGCTG CGGAAGAGGCCGGCTTTCGC
Downstream 100 bases:
>100_bases TGGCCCCAATCGCCACCCTCCGTAAACGATCGGCTATTCGCGAGCGGCGCAGCCCCCTGCGCTGCTATCGGTCGGGTGCG TCCGTGATTCCGGCCTCGCT
Product: permease YjgP/YjgQ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MSMLTNTLGRYFAGRFMVAALGVFASIFLLLVLVDYIEMVRRTSGLASASALMVAETSLFRVPQLLEKLTPFCVLIGAMT CYLALSRKLELVVARAAGVSAWQFISPTLACAIALGVFATTVYNPLSSNLRELSKRMEAEMFGGASGGGLHDASGFWINQ VTDDGQAIINAALSEQQGVRLTGLTVFRFDPDSRFRERIEAREAALEDGRWLFKGVRRFTLDNPPVEQETFVLPTSLTPA QVQNSFSTPETVSFWQLPDYIRSSESSGFATAGYRLQYHKLIAQPFLLAAMVMLAASVSLRFFRFGGVQKMVLSGVGSGF LLYVLSKVTEDLSKAELMNPIAAAWLPVCVGGLTGFLVLLHQEDG
Sequences:
>Translated_365_residues MSMLTNTLGRYFAGRFMVAALGVFASIFLLLVLVDYIEMVRRTSGLASASALMVAETSLFRVPQLLEKLTPFCVLIGAMT CYLALSRKLELVVARAAGVSAWQFISPTLACAIALGVFATTVYNPLSSNLRELSKRMEAEMFGGASGGGLHDASGFWINQ VTDDGQAIINAALSEQQGVRLTGLTVFRFDPDSRFRERIEAREAALEDGRWLFKGVRRFTLDNPPVEQETFVLPTSLTPA QVQNSFSTPETVSFWQLPDYIRSSESSGFATAGYRLQYHKLIAQPFLLAAMVMLAASVSLRFFRFGGVQKMVLSGVGSGF LLYVLSKVTEDLSKAELMNPIAAAWLPVCVGGLTGFLVLLHQEDG >Mature_364_residues SMLTNTLGRYFAGRFMVAALGVFASIFLLLVLVDYIEMVRRTSGLASASALMVAETSLFRVPQLLEKLTPFCVLIGAMTC YLALSRKLELVVARAAGVSAWQFISPTLACAIALGVFATTVYNPLSSNLRELSKRMEAEMFGGASGGGLHDASGFWINQV TDDGQAIINAALSEQQGVRLTGLTVFRFDPDSRFRERIEAREAALEDGRWLFKGVRRFTLDNPPVEQETFVLPTSLTPAQ VQNSFSTPETVSFWQLPDYIRSSESSGFATAGYRLQYHKLIAQPFLLAAMVMLAASVSLRFFRFGGVQKMVLSGVGSGFL LYVLSKVTEDLSKAELMNPIAAAWLPVCVGGLTGFLVLLHQEDG
Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lptF/lptG family [H]
Homologues:
Organism=Escherichia coli, GI87082400, Length=340, Percent_Identity=25, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005495 [H]
Pfam domain/function: PF03739 YjgP_YjgQ [H]
EC number: NA
Molecular weight: Translated: 39831; Mature: 39700
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMLTNTLGRYFAGRFMVAALGVFASIFLLLVLVDYIEMVRRTSGLASASALMVAETSLF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RVPQLLEKLTPFCVLIGAMTCYLALSRKLELVVARAAGVSAWQFISPTLACAIALGVFAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH TVYNPLSSNLRELSKRMEAEMFGGASGGGLHDASGFWINQVTDDGQAIINAALSEQQGVR HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCE LTGLTVFRFDPDSRFRERIEAREAALEDGRWLFKGVRRFTLDNPPVEQETFVLPTSLTPA EEEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCHH QVQNSFSTPETVSFWQLPDYIRSSESSGFATAGYRLQYHKLIAQPFLLAAMVMLAASVSL HHHCCCCCCCCEEHHCCHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH RFFRFGGVQKMVLSGVGSGFLLYVLSKVTEDLSKAELMNPIAAAWLPVCVGGLTGFLVLL HHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE HQEDG ECCCC >Mature Secondary Structure SMLTNTLGRYFAGRFMVAALGVFASIFLLLVLVDYIEMVRRTSGLASASALMVAETSLF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RVPQLLEKLTPFCVLIGAMTCYLALSRKLELVVARAAGVSAWQFISPTLACAIALGVFAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH TVYNPLSSNLRELSKRMEAEMFGGASGGGLHDASGFWINQVTDDGQAIINAALSEQQGVR HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCE LTGLTVFRFDPDSRFRERIEAREAALEDGRWLFKGVRRFTLDNPPVEQETFVLPTSLTPA EEEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCHH QVQNSFSTPETVSFWQLPDYIRSSESSGFATAGYRLQYHKLIAQPFLLAAMVMLAASVSL HHHCCCCCCCCEEHHCCHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH RFFRFGGVQKMVLSGVGSGFLLYVLSKVTEDLSKAELMNPIAAAWLPVCVGGLTGFLVLL HHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE HQEDG ECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]