| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is folE [H]
Identifier: 75675521
GI number: 75675521
Start: 1458492
End: 1459217
Strand: Direct
Name: folE [H]
Synonym: Nwi_1329
Alternate gene names: 75675521
Gene position: 1458492-1459217 (Clockwise)
Preceding gene: 75675519
Following gene: 75675522
Centisome position: 42.87
GC content: 61.71
Gene sequence:
>726_bases ATGGACGCTTTGATCAAGCCGCTGCGCAGCGGCAAGCCTTCTGACATCAACAAGGCTTCTGATATCAAATCCAGTAACGC CAAGCCTGCCGGCTTTTCTCCCGCTCAACTGGACCCGTCGGAGTTTATGGCGGCGGTTCAGCCGAACCGGCAGCGCCCGT CGAGGCATGAAGCTGAAGACGCGGTCAGAACGTTGCTGGCCTATATCGGCGAAAATCCCGACCGGGAGGGGCTGCTCGAT ACCCCGCGCCGGGTGATCGAATCGTATGACGAGATTTATCAAGGCTATCATCAGTGTCCGGCCGAAGTGTTGAATCGGAC CTTCGGTGAAACCGCCGGCTATGATGATTTCGTGCTGGTGCGCGACATCCAGTTCACTTCGCAGTGCGAGCATCACATGA TGCCGTTCTATGGCAAAGCGCATATCGCCTATACGCCGGTGGAGCGGGTGGTCGGGCTGTCCAAGCTGGCGCGTCTGACC GACATCTTCGCCCGGAGACTCCAGACCCAGGAGCACATGACCGCGCAGATCGCCGCGGCCGTGGACGAGGTGCTCAAGCC GCGCGGCGTCGCCGTGATGATCGAGGCCGAGCATACCTGCATGTCGGTGCGCGGCGTCGCCAAGCATGGCGCGATGACCG TCACCAGCCGGTTCACCGGCGTGTTCCGAGACGATCCGGCGGAGCAGGCGCGTTTCCTGTCCATGGTACGGGGGCAGCCG CGTTAG
Upstream 100 bases:
>100_bases TTAAATATCAAGGGACTCAGGCGTCCGGTGGCGAGAAAGGCCGCCCCGTCTGCCCGGTGACACCTCCGGTCCAACGTCAG GCCGGTCGAACGGAGTGAAG
Downstream 100 bases:
>100_bases TCCCCATCCGCGTTTCGGAGCGAAGCCATTGCTATTCCGGGTTCGCGTGAAGAAAGCACGTCAAGCATAAAGAAAGATAG AGTCTTTCACCTTTTCCATG
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MDALIKPLRSGKPSDINKASDIKSSNAKPAGFSPAQLDPSEFMAAVQPNRQRPSRHEAEDAVRTLLAYIGENPDREGLLD TPRRVIESYDEIYQGYHQCPAEVLNRTFGETAGYDDFVLVRDIQFTSQCEHHMMPFYGKAHIAYTPVERVVGLSKLARLT DIFARRLQTQEHMTAQIAAAVDEVLKPRGVAVMIEAEHTCMSVRGVAKHGAMTVTSRFTGVFRDDPAEQARFLSMVRGQP R
Sequences:
>Translated_241_residues MDALIKPLRSGKPSDINKASDIKSSNAKPAGFSPAQLDPSEFMAAVQPNRQRPSRHEAEDAVRTLLAYIGENPDREGLLD TPRRVIESYDEIYQGYHQCPAEVLNRTFGETAGYDDFVLVRDIQFTSQCEHHMMPFYGKAHIAYTPVERVVGLSKLARLT DIFARRLQTQEHMTAQIAAAVDEVLKPRGVAVMIEAEHTCMSVRGVAKHGAMTVTSRFTGVFRDDPAEQARFLSMVRGQP R >Mature_241_residues MDALIKPLRSGKPSDINKASDIKSSNAKPAGFSPAQLDPSEFMAAVQPNRQRPSRHEAEDAVRTLLAYIGENPDREGLLD TPRRVIESYDEIYQGYHQCPAEVLNRTFGETAGYDDFVLVRDIQFTSQCEHHMMPFYGKAHIAYTPVERVVGLSKLARLT DIFARRLQTQEHMTAQIAAAVDEVLKPRGVAVMIEAEHTCMSVRGVAKHGAMTVTSRFTGVFRDDPAEQARFLSMVRGQP R
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=223, Percent_Identity=42.6008968609865, Blast_Score=182, Evalue=2e-46, Organism=Homo sapiens, GI4503949, Length=223, Percent_Identity=42.6008968609865, Blast_Score=182, Evalue=2e-46, Organism=Homo sapiens, GI66932970, Length=193, Percent_Identity=39.3782383419689, Blast_Score=140, Evalue=1e-33, Organism=Homo sapiens, GI66932972, Length=182, Percent_Identity=41.2087912087912, Blast_Score=139, Evalue=2e-33, Organism=Escherichia coli, GI1788476, Length=198, Percent_Identity=34.8484848484849, Blast_Score=110, Evalue=8e-26, Organism=Caenorhabditis elegans, GI17560486, Length=178, Percent_Identity=46.6292134831461, Blast_Score=174, Evalue=4e-44, Organism=Saccharomyces cerevisiae, GI6321706, Length=178, Percent_Identity=47.1910112359551, Blast_Score=168, Evalue=6e-43, Organism=Drosophila melanogaster, GI24656782, Length=178, Percent_Identity=49.438202247191, Blast_Score=171, Evalue=3e-43, Organism=Drosophila melanogaster, GI24656791, Length=178, Percent_Identity=49.438202247191, Blast_Score=171, Evalue=5e-43, Organism=Drosophila melanogaster, GI24656796, Length=178, Percent_Identity=49.438202247191, Blast_Score=171, Evalue=6e-43,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 26917; Mature: 26917
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDALIKPLRSGKPSDINKASDIKSSNAKPAGFSPAQLDPSEFMAAVQPNRQRPSRHEAED CCHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHH AVRTLLAYIGENPDREGLLDTPRRVIESYDEIYQGYHQCPAEVLNRTFGETAGYDDFVLV HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCEEEE RDIQFTSQCEHHMMPFYGKAHIAYTPVERVVGLSKLARLTDIFARRLQTQEHMTAQIAAA ECCHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDEVLKPRGVAVMIEAEHTCMSVRGVAKHGAMTVTSRFTGVFRDDPAEQARFLSMVRGQP HHHHHCCCCCEEEEECCHHHHHHHHHHHCCCEEHHHHHHHCCCCCHHHHHHHHHHHCCCC R C >Mature Secondary Structure MDALIKPLRSGKPSDINKASDIKSSNAKPAGFSPAQLDPSEFMAAVQPNRQRPSRHEAED CCHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHH AVRTLLAYIGENPDREGLLDTPRRVIESYDEIYQGYHQCPAEVLNRTFGETAGYDDFVLV HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCEEEE RDIQFTSQCEHHMMPFYGKAHIAYTPVERVVGLSKLARLTDIFARRLQTQEHMTAQIAAA ECCHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDEVLKPRGVAVMIEAEHTCMSVRGVAKHGAMTVTSRFTGVFRDDPAEQARFLSMVRGQP HHHHHCCCCCEEEEECCHHHHHHHHHHHCCCEEHHHHHHHCCCCCHHHHHHHHHHHCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA