| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75675519
Identifier: 75675519
GI number: 75675519
Start: 1456759
End: 1457676
Strand: Direct
Name: 75675519
Synonym: Nwi_1327
Alternate gene names: NA
Gene position: 1456759-1457676 (Clockwise)
Preceding gene: 75675517
Following gene: 75675521
Centisome position: 42.82
GC content: 63.83
Gene sequence:
>918_bases TTGAGGTTCGCGCAATCATCTGGCTTCTGTGGACGGGCGCTTTTGTACGCGGCAGCTTTTGGTCTTGCCTTTTCAGGCCC ATCGGCCGCATTGGAAAAAGTAGGTCCCGCAAAGGTAAACGTCGAAGCGCGCAAGCAGCCGATGCGATTCTCCTGGGTGG CTTGTGAGCCGCGCTGCGGGAGCTGGATCACCGCCGTCGGCCTCGTCACGAGCGAGACCCTTAAAACCTTTAACGACTTC GCCGCCGGGCGCGATCTTGCTGGGGCGACGGTCGTGCTGGACTCCGGTGGCGGTTCGGTCAACGACGCCATCGCGCTCGG GCGGCGCTGGCGGGAACTCGGCCTGCGCACCACGGTCGGAACCAGCGTCGTCGTCACGACGGCGGCAGGCGATCGCGCGG CCGTGCTGCCCGAAGCCTATTGCGAGTCCATGTGCGTGTTCGTGTTGCTGTCTGGAAAAACCCGCTACGTGCCTGAGCGT GCGCATGTTCGCGTTCATCAGATCTGGATGGGAGATCGCGCGGAGAACGCCAGGGCCGCTAGCTACACTGCCGAGGATTT GACGACCGTGGAGCGCGACATCGGCCGGCTCGCCAAGTACACCTTCGAGATGGGCGGGTCGGGTGACCTGTTGTATCTGG CGCTTAACATTCCTCCCTGGGAGGCGCTCTATGAATTGTCGCGATCTGAGTTACGTTCCACCAACTTGGTGACGACGGAC CGTGTCGCGGATGTGTTGCCGGATGGGGAGGTCGCCGAGGCGCCCGTCGCCGATCTCGTCACCAAGCCGGTACAGGATCG CTTTCCTGGCGCCACGAATGCGCCCGCTGTTGTGACGATGACGGGACAGCCGACCAAGACGGCCGAAGCGGAGCCCTCCG GCGCTGCTGTGGTGACGACCGTCCCGGCCCGGCAATAG
Upstream 100 bases:
>100_bases TTCTGATGACAGATCACCACGTTGGAGCTGGACCGTGAGGGTCCGGCTGCACGGATTGGGCCCGGTGCTTTAGGGATATC GGTCGCGGGAAGGAACCGAA
Downstream 100 bases:
>100_bases AGCCTTTCCGCTTCTGATGGAATCAGAAGCAGGCTCTATTATTGTTTGTCGCGTTTTCTTCACGCGAACCGGTATCCACT TCGCTCGAAAACGCTTTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MRFAQSSGFCGRALLYAAAFGLAFSGPSAALEKVGPAKVNVEARKQPMRFSWVACEPRCGSWITAVGLVTSETLKTFNDF AAGRDLAGATVVLDSGGGSVNDAIALGRRWRELGLRTTVGTSVVVTTAAGDRAAVLPEAYCESMCVFVLLSGKTRYVPER AHVRVHQIWMGDRAENARAASYTAEDLTTVERDIGRLAKYTFEMGGSGDLLYLALNIPPWEALYELSRSELRSTNLVTTD RVADVLPDGEVAEAPVADLVTKPVQDRFPGATNAPAVVTMTGQPTKTAEAEPSGAAVVTTVPARQ
Sequences:
>Translated_305_residues MRFAQSSGFCGRALLYAAAFGLAFSGPSAALEKVGPAKVNVEARKQPMRFSWVACEPRCGSWITAVGLVTSETLKTFNDF AAGRDLAGATVVLDSGGGSVNDAIALGRRWRELGLRTTVGTSVVVTTAAGDRAAVLPEAYCESMCVFVLLSGKTRYVPER AHVRVHQIWMGDRAENARAASYTAEDLTTVERDIGRLAKYTFEMGGSGDLLYLALNIPPWEALYELSRSELRSTNLVTTD RVADVLPDGEVAEAPVADLVTKPVQDRFPGATNAPAVVTMTGQPTKTAEAEPSGAAVVTTVPARQ >Mature_305_residues MRFAQSSGFCGRALLYAAAFGLAFSGPSAALEKVGPAKVNVEARKQPMRFSWVACEPRCGSWITAVGLVTSETLKTFNDF AAGRDLAGATVVLDSGGGSVNDAIALGRRWRELGLRTTVGTSVVVTTAAGDRAAVLPEAYCESMCVFVLLSGKTRYVPER AHVRVHQIWMGDRAENARAASYTAEDLTTVERDIGRLAKYTFEMGGSGDLLYLALNIPPWEALYELSRSELRSTNLVTTD RVADVLPDGEVAEAPVADLVTKPVQDRFPGATNAPAVVTMTGQPTKTAEAEPSGAAVVTTVPARQ
Specific function: Unknown
COG id: COG3904
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32431; Mature: 32431
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFAQSSGFCGRALLYAAAFGLAFSGPSAALEKVGPAKVNVEARKQPMRFSWVACEPRCG CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEHHHHCCCCEEEEEEECCCCC SWITAVGLVTSETLKTFNDFAAGRDLAGATVVLDSGGGSVNDAIALGRRWRELGLRTTVG CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEECC TSVVVTTAAGDRAAVLPEAYCESMCVFVLLSGKTRYVPERAHVRVHQIWMGDRAENARAA CEEEEEECCCCCEEECHHHHHHHEEEEEEECCCCCCCCCHHCEEEEEEEECCCCCCCCHH SYTAEDLTTVERDIGRLAKYTFEMGGSGDLLYLALNIPPWEALYELSRSELRSTNLVTTD CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEHH RVADVLPDGEVAEAPVADLVTKPVQDRFPGATNAPAVVTMTGQPTKTAEAEPSGAAVVTT HHHHHCCCCCCCCCCHHHHHHCCHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEE VPARQ CCCCC >Mature Secondary Structure MRFAQSSGFCGRALLYAAAFGLAFSGPSAALEKVGPAKVNVEARKQPMRFSWVACEPRCG CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEHHHHCCCCEEEEEEECCCCC SWITAVGLVTSETLKTFNDFAAGRDLAGATVVLDSGGGSVNDAIALGRRWRELGLRTTVG CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEECC TSVVVTTAAGDRAAVLPEAYCESMCVFVLLSGKTRYVPERAHVRVHQIWMGDRAENARAA CEEEEEECCCCCEEECHHHHHHHEEEEEEECCCCCCCCCHHCEEEEEEEECCCCCCCCHH SYTAEDLTTVERDIGRLAKYTFEMGGSGDLLYLALNIPPWEALYELSRSELRSTNLVTTD CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEHH RVADVLPDGEVAEAPVADLVTKPVQDRFPGATNAPAVVTMTGQPTKTAEAEPSGAAVVTT HHHHHCCCCCCCCCCHHHHHHCCHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEE VPARQ CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA