Definition Nitrobacter winogradskyi Nb-255, complete genome.
Accession NC_007406
Length 3,402,093

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The map label for this gene is 75675519

Identifier: 75675519

GI number: 75675519

Start: 1456759

End: 1457676

Strand: Direct

Name: 75675519

Synonym: Nwi_1327

Alternate gene names: NA

Gene position: 1456759-1457676 (Clockwise)

Preceding gene: 75675517

Following gene: 75675521

Centisome position: 42.82

GC content: 63.83

Gene sequence:

>918_bases
TTGAGGTTCGCGCAATCATCTGGCTTCTGTGGACGGGCGCTTTTGTACGCGGCAGCTTTTGGTCTTGCCTTTTCAGGCCC
ATCGGCCGCATTGGAAAAAGTAGGTCCCGCAAAGGTAAACGTCGAAGCGCGCAAGCAGCCGATGCGATTCTCCTGGGTGG
CTTGTGAGCCGCGCTGCGGGAGCTGGATCACCGCCGTCGGCCTCGTCACGAGCGAGACCCTTAAAACCTTTAACGACTTC
GCCGCCGGGCGCGATCTTGCTGGGGCGACGGTCGTGCTGGACTCCGGTGGCGGTTCGGTCAACGACGCCATCGCGCTCGG
GCGGCGCTGGCGGGAACTCGGCCTGCGCACCACGGTCGGAACCAGCGTCGTCGTCACGACGGCGGCAGGCGATCGCGCGG
CCGTGCTGCCCGAAGCCTATTGCGAGTCCATGTGCGTGTTCGTGTTGCTGTCTGGAAAAACCCGCTACGTGCCTGAGCGT
GCGCATGTTCGCGTTCATCAGATCTGGATGGGAGATCGCGCGGAGAACGCCAGGGCCGCTAGCTACACTGCCGAGGATTT
GACGACCGTGGAGCGCGACATCGGCCGGCTCGCCAAGTACACCTTCGAGATGGGCGGGTCGGGTGACCTGTTGTATCTGG
CGCTTAACATTCCTCCCTGGGAGGCGCTCTATGAATTGTCGCGATCTGAGTTACGTTCCACCAACTTGGTGACGACGGAC
CGTGTCGCGGATGTGTTGCCGGATGGGGAGGTCGCCGAGGCGCCCGTCGCCGATCTCGTCACCAAGCCGGTACAGGATCG
CTTTCCTGGCGCCACGAATGCGCCCGCTGTTGTGACGATGACGGGACAGCCGACCAAGACGGCCGAAGCGGAGCCCTCCG
GCGCTGCTGTGGTGACGACCGTCCCGGCCCGGCAATAG

Upstream 100 bases:

>100_bases
TTCTGATGACAGATCACCACGTTGGAGCTGGACCGTGAGGGTCCGGCTGCACGGATTGGGCCCGGTGCTTTAGGGATATC
GGTCGCGGGAAGGAACCGAA

Downstream 100 bases:

>100_bases
AGCCTTTCCGCTTCTGATGGAATCAGAAGCAGGCTCTATTATTGTTTGTCGCGTTTTCTTCACGCGAACCGGTATCCACT
TCGCTCGAAAACGCTTTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MRFAQSSGFCGRALLYAAAFGLAFSGPSAALEKVGPAKVNVEARKQPMRFSWVACEPRCGSWITAVGLVTSETLKTFNDF
AAGRDLAGATVVLDSGGGSVNDAIALGRRWRELGLRTTVGTSVVVTTAAGDRAAVLPEAYCESMCVFVLLSGKTRYVPER
AHVRVHQIWMGDRAENARAASYTAEDLTTVERDIGRLAKYTFEMGGSGDLLYLALNIPPWEALYELSRSELRSTNLVTTD
RVADVLPDGEVAEAPVADLVTKPVQDRFPGATNAPAVVTMTGQPTKTAEAEPSGAAVVTTVPARQ

Sequences:

>Translated_305_residues
MRFAQSSGFCGRALLYAAAFGLAFSGPSAALEKVGPAKVNVEARKQPMRFSWVACEPRCGSWITAVGLVTSETLKTFNDF
AAGRDLAGATVVLDSGGGSVNDAIALGRRWRELGLRTTVGTSVVVTTAAGDRAAVLPEAYCESMCVFVLLSGKTRYVPER
AHVRVHQIWMGDRAENARAASYTAEDLTTVERDIGRLAKYTFEMGGSGDLLYLALNIPPWEALYELSRSELRSTNLVTTD
RVADVLPDGEVAEAPVADLVTKPVQDRFPGATNAPAVVTMTGQPTKTAEAEPSGAAVVTTVPARQ
>Mature_305_residues
MRFAQSSGFCGRALLYAAAFGLAFSGPSAALEKVGPAKVNVEARKQPMRFSWVACEPRCGSWITAVGLVTSETLKTFNDF
AAGRDLAGATVVLDSGGGSVNDAIALGRRWRELGLRTTVGTSVVVTTAAGDRAAVLPEAYCESMCVFVLLSGKTRYVPER
AHVRVHQIWMGDRAENARAASYTAEDLTTVERDIGRLAKYTFEMGGSGDLLYLALNIPPWEALYELSRSELRSTNLVTTD
RVADVLPDGEVAEAPVADLVTKPVQDRFPGATNAPAVVTMTGQPTKTAEAEPSGAAVVTTVPARQ

Specific function: Unknown

COG id: COG3904

COG function: function code S; Predicted periplasmic protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32431; Mature: 32431

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFAQSSGFCGRALLYAAAFGLAFSGPSAALEKVGPAKVNVEARKQPMRFSWVACEPRCG
CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEHHHHCCCCEEEEEEECCCCC
SWITAVGLVTSETLKTFNDFAAGRDLAGATVVLDSGGGSVNDAIALGRRWRELGLRTTVG
CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEECC
TSVVVTTAAGDRAAVLPEAYCESMCVFVLLSGKTRYVPERAHVRVHQIWMGDRAENARAA
CEEEEEECCCCCEEECHHHHHHHEEEEEEECCCCCCCCCHHCEEEEEEEECCCCCCCCHH
SYTAEDLTTVERDIGRLAKYTFEMGGSGDLLYLALNIPPWEALYELSRSELRSTNLVTTD
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEHH
RVADVLPDGEVAEAPVADLVTKPVQDRFPGATNAPAVVTMTGQPTKTAEAEPSGAAVVTT
HHHHHCCCCCCCCCCHHHHHHCCHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEE
VPARQ
CCCCC
>Mature Secondary Structure
MRFAQSSGFCGRALLYAAAFGLAFSGPSAALEKVGPAKVNVEARKQPMRFSWVACEPRCG
CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEHHHHCCCCEEEEEEECCCCC
SWITAVGLVTSETLKTFNDFAAGRDLAGATVVLDSGGGSVNDAIALGRRWRELGLRTTVG
CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEECC
TSVVVTTAAGDRAAVLPEAYCESMCVFVLLSGKTRYVPERAHVRVHQIWMGDRAENARAA
CEEEEEECCCCCEEECHHHHHHHEEEEEEECCCCCCCCCHHCEEEEEEEECCCCCCCCHH
SYTAEDLTTVERDIGRLAKYTFEMGGSGDLLYLALNIPPWEALYELSRSELRSTNLVTTD
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEHH
RVADVLPDGEVAEAPVADLVTKPVQDRFPGATNAPAVVTMTGQPTKTAEAEPSGAAVVTT
HHHHHCCCCCCCCCCHHHHHHCCHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEE
VPARQ
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA