| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is cusR [H]
Identifier: 75675389
GI number: 75675389
Start: 1303301
End: 1304017
Strand: Direct
Name: cusR [H]
Synonym: Nwi_1196
Alternate gene names: 75675389
Gene position: 1303301-1304017 (Clockwise)
Preceding gene: 75675388
Following gene: 75675391
Centisome position: 38.31
GC content: 59.83
Gene sequence:
>717_bases ATGGTGATGGAAAGACAACCTTTGGACAATTCCAGTAACCAGATGCGCCTGCTGATCATCGAGGACGATCGCGAGTCCGC GGACTACCTCGTGAAGGCGTTTCGCGAGGTCGGACATATCGCGGAACTCGCCAGAGACGGCGAGGAAGGCCTCTCCTTTG CCGACGGCGGGGACTACGACGTACTGGTGATCGATCGGATGCTGCCCAAGCGCGACGGGCTTTCCGTGATCGGCTGCCTG CGCGAGAAAGGCATCCTCACTCCGGTGCTCATTCTCTCTGCGCTCGGCCAGGTCGACGATCGCATCAAGGGCTTGCGCGC CGGCGGCGACGACTATCTGCCTAAACCGTACTCATTTGCCGAGTTGCTGGCGCGGGTGGAGGTCCTGTCGCGTCGTCATG GCGGGCGCGCCGAAGAAACGCTCTATCGTGTCGGCGATCTCGAACTGGACCGGCTGTCACGCCGCGTTGCGCGGGGTGGA GAGGAACTGACGCTTCAGCCGCGTGAGTTTCGCCTGTTGGAGTATCTCATGAAGCATGCGGGTCAGGTCGTGACCCGAAC CATGCTGCTGGAGAATGTCTGGGATTATCATTTTGATCCGCAGACTAACGTCATCGACGTGCATATCTCGCGGTTGCGTT CCAAGATCGATAAAGGTTTCGAGCAGCCTCTGCTGCACACCATCCGTGGCGCCGGATACATGGTGCGGAGTGGTTAG
Upstream 100 bases:
>100_bases CTAGGGCGGTGGAGTTGCCCCAAGCTTCACCGCCCGTTTTTTGCACGGCGGCCGCCGGGGCGTGGTCTTTGCGGTCTTGC GCGCGCGGAATGAGCGCGCC
Downstream 100 bases:
>100_bases AACACGGTAGATTTTGAAAACCTCCGACCATTAGAGCGTTTTCAAGCGAAGTGGATATCGGTTCGCATGACGAAAACGCG TCTAAACAACAATATAGAGC
Product: two-component transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MVMERQPLDNSSNQMRLLIIEDDRESADYLVKAFREVGHIAELARDGEEGLSFADGGDYDVLVIDRMLPKRDGLSVIGCL REKGILTPVLILSALGQVDDRIKGLRAGGDDYLPKPYSFAELLARVEVLSRRHGGRAEETLYRVGDLELDRLSRRVARGG EELTLQPREFRLLEYLMKHAGQVVTRTMLLENVWDYHFDPQTNVIDVHISRLRSKIDKGFEQPLLHTIRGAGYMVRSG
Sequences:
>Translated_238_residues MVMERQPLDNSSNQMRLLIIEDDRESADYLVKAFREVGHIAELARDGEEGLSFADGGDYDVLVIDRMLPKRDGLSVIGCL REKGILTPVLILSALGQVDDRIKGLRAGGDDYLPKPYSFAELLARVEVLSRRHGGRAEETLYRVGDLELDRLSRRVARGG EELTLQPREFRLLEYLMKHAGQVVTRTMLLENVWDYHFDPQTNVIDVHISRLRSKIDKGFEQPLLHTIRGAGYMVRSG >Mature_238_residues MVMERQPLDNSSNQMRLLIIEDDRESADYLVKAFREVGHIAELARDGEEGLSFADGGDYDVLVIDRMLPKRDGLSVIGCL REKGILTPVLILSALGQVDDRIKGLRAGGDDYLPKPYSFAELLARVEVLSRRHGGRAEETLYRVGDLELDRLSRRVARGG EELTLQPREFRLLEYLMKHAGQVVTRTMLLENVWDYHFDPQTNVIDVHISRLRSKIDKGFEQPLLHTIRGAGYMVRSG
Specific function: Member of the two-component regulatory system CusS/CusR. Activates the expression of cusCFBA in response to increasing levels of copper ions, and probably silver ions [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786784, Length=221, Percent_Identity=45.7013574660633, Blast_Score=216, Evalue=1e-57, Organism=Escherichia coli, GI87082012, Length=219, Percent_Identity=39.7260273972603, Blast_Score=175, Evalue=3e-45, Organism=Escherichia coli, GI1790552, Length=224, Percent_Identity=40.1785714285714, Blast_Score=149, Evalue=2e-37, Organism=Escherichia coli, GI1789402, Length=221, Percent_Identity=37.5565610859729, Blast_Score=144, Evalue=4e-36, Organism=Escherichia coli, GI1786599, Length=220, Percent_Identity=33.6363636363636, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI1787375, Length=220, Percent_Identity=30.4545454545455, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1786911, Length=219, Percent_Identity=35.1598173515982, Blast_Score=114, Evalue=6e-27, Organism=Escherichia coli, GI2367329, Length=231, Percent_Identity=35.9307359307359, Blast_Score=111, Evalue=5e-26, Organism=Escherichia coli, GI1789809, Length=226, Percent_Identity=30.0884955752212, Blast_Score=105, Evalue=2e-24, Organism=Escherichia coli, GI1788394, Length=233, Percent_Identity=31.7596566523605, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI1790860, Length=223, Percent_Identity=32.7354260089686, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1790863, Length=226, Percent_Identity=29.646017699115, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1787229, Length=226, Percent_Identity=26.9911504424779, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI145693140, Length=187, Percent_Identity=33.6898395721925, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1787487, Length=101, Percent_Identity=34.6534653465347, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR006291 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 27017; Mature: 27017
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMERQPLDNSSNQMRLLIIEDDRESADYLVKAFREVGHIAELARDGEEGLSFADGGDYD CCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCEE VLVIDRMLPKRDGLSVIGCLREKGILTPVLILSALGQVDDRIKGLRAGGDDYLPKPYSFA EEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH ELLARVEVLSRRHGGRAEETLYRVGDLELDRLSRRVARGGEELTLQPREFRLLEYLMKHA HHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHH GQVVTRTMLLENVWDYHFDPQTNVIDVHISRLRSKIDKGFEQPLLHTIRGAGYMVRSG HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEEECC >Mature Secondary Structure MVMERQPLDNSSNQMRLLIIEDDRESADYLVKAFREVGHIAELARDGEEGLSFADGGDYD CCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCEE VLVIDRMLPKRDGLSVIGCLREKGILTPVLILSALGQVDDRIKGLRAGGDDYLPKPYSFA EEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH ELLARVEVLSRRHGGRAEETLYRVGDLELDRLSRRVARGGEELTLQPREFRLLEYLMKHA HHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHH GQVVTRTMLLENVWDYHFDPQTNVIDVHISRLRSKIDKGFEQPLLHTIRGAGYMVRSG HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]