| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
Click here to switch to the map view.
The map label for this gene is zur [H]
Identifier: 75674691
GI number: 75674691
Start: 550148
End: 550681
Strand: Direct
Name: zur [H]
Synonym: Nwi_0493
Alternate gene names: 75674691
Gene position: 550148-550681 (Clockwise)
Preceding gene: 75674690
Following gene: 75674692
Centisome position: 16.17
GC content: 63.48
Gene sequence:
>534_bases ATGGGGAGCGGAACTGGTTCAAACGGGTTAATGGATAATCGAATGACCGCGACCAGACCGACATTCCCCGTTCCGGGACA TGACCACGACCGCTGCGCCGCCGAGGCGATCAGCCACGCTGAGCAAATCTGCGCGCGGCGCGGCCAGAAGTTCACGCCGA TCCGCCGTCAGGTGCTGCAGGCGCTGCTGTCGAGCCATCGGCCCCTCGGCGCCTATGAGGTGATCGAGGAACTGGCGAAA TCGATCCCGCGCCCGGCGCCGATCACGGTCTATCGCGCGCTCGATTTTCTGATGGGGAACGGTCTGGTTCACCGGATCGA AAGCCGCAATGCGTTTCTGGCCTGCGGGCACGACCATGATGAGAGCGCGATGGTGGCGTTTCTGATCTGCGAGCAGTGCG GTTCGGTCGGCGAGATTCCAGCAAGCCGCGTGGCGCGGAGTCTGAGCGATGCCGTCCGCACCACGGGGTTCACCCCGAAA CTCTCCGTGGTTGAAATTACCGGCACCTGCGCGCATTGCCAGAACGCGTCCTGA
Upstream 100 bases:
>100_bases CCTGGCGGCGCTCCTGGATGTGGCGCGCGTGGGTTGTTATTTAGGGTATGTCATGTTGCATTGCGGCGCGAACTGAGAAA GTTTTCGGGATGATCCTGAA
Downstream 100 bases:
>100_bases ATCGAGAGCCGCCGGCCGTGAACTCCCGTTGACGATTTTGGTTGACCTCTTCGCTGCGATTTTTGTTATAAATCAATGTC TTGCTTTGATTTAACGGTGA
Product: ferric-uptake regulator
Products: NA
Alternate protein names: Zinc uptake regulator [H]
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MGSGTGSNGLMDNRMTATRPTFPVPGHDHDRCAAEAISHAEQICARRGQKFTPIRRQVLQALLSSHRPLGAYEVIEELAK SIPRPAPITVYRALDFLMGNGLVHRIESRNAFLACGHDHDESAMVAFLICEQCGSVGEIPASRVARSLSDAVRTTGFTPK LSVVEITGTCAHCQNAS
Sequences:
>Translated_177_residues MGSGTGSNGLMDNRMTATRPTFPVPGHDHDRCAAEAISHAEQICARRGQKFTPIRRQVLQALLSSHRPLGAYEVIEELAK SIPRPAPITVYRALDFLMGNGLVHRIESRNAFLACGHDHDESAMVAFLICEQCGSVGEIPASRVARSLSDAVRTTGFTPK LSVVEITGTCAHCQNAS >Mature_176_residues GSGTGSNGLMDNRMTATRPTFPVPGHDHDRCAAEAISHAEQICARRGQKFTPIRRQVLQALLSSHRPLGAYEVIEELAKS IPRPAPITVYRALDFLMGNGLVHRIESRNAFLACGHDHDESAMVAFLICEQCGSVGEIPASRVARSLSDAVRTTGFTPKL SVVEITGTCAHCQNAS
Specific function: Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes (znuACB) [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI87082363, Length=139, Percent_Identity=35.9712230215827, Blast_Score=97, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 19082; Mature: 18951
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSGTGSNGLMDNRMTATRPTFPVPGHDHDRCAAEAISHAEQICARRGQKFTPIRRQVLQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH ALLSSHRPLGAYEVIEELAKSIPRPAPITVYRALDFLMGNGLVHRIESRNAFLACGHDHD HHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHEEECCCCEEEEECCCCC ESAMVAFLICEQCGSVGEIPASRVARSLSDAVRTTGFTPKLSVVEITGTCAHCQNAS CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure GSGTGSNGLMDNRMTATRPTFPVPGHDHDRCAAEAISHAEQICARRGQKFTPIRRQVLQ CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH ALLSSHRPLGAYEVIEELAKSIPRPAPITVYRALDFLMGNGLVHRIESRNAFLACGHDHD HHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHEEECCCCEEEEECCCCC ESAMVAFLICEQCGSVGEIPASRVARSLSDAVRTTGFTPKLSVVEITGTCAHCQNAS CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 9680209 [H]