| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is ydjP [H]
Identifier: 75674690
GI number: 75674690
Start: 548965
End: 549825
Strand: Direct
Name: ydjP [H]
Synonym: Nwi_0492
Alternate gene names: 75674690
Gene position: 548965-549825 (Clockwise)
Preceding gene: 75674686
Following gene: 75674691
Centisome position: 16.14
GC content: 61.9
Gene sequence:
>861_bases ATGTTGTCGCGCACGATCGAGACGTCACAGGGGCGGTTGGCCTTCCTGGAAAGTTCAGGGAGCGGCACGCCTGTCGTTTT TATACATGGAAACTCGACCTGTCGTGACGTATTTCGGCATCAATTCGAAACGACGCTGGCGGCGACACAGCGCATCATCG CGATCGATCTGCCTGGTCACGGACAATCGGATGACGCGCTGGATCCGCAGAAGGCTTACACCATTCCCGGTTATGCGGCG ACGCTGATCGAGGCGTTACGATCATTGAATATCACACGGGCGGCGCTTGTCGGCTGGTCGCTGGGTGGACATGTCAGCCT CGAAATGATCGGGCAAGGGTTTGATGCCGCGGGCGCCATGATCATCGGCGCGCCGCCCATCAAGCGCGGCATTCTGGGAA TGGTCCGCGGCTTTCAGGCTCAGCTCGATCTGCTGCTCGCTACCAAAAGCGCGCTGAATGCGCGCGACATCAGCCGATTT GCGCGTGCCTGCGTCGGGGAGAAGCATGCGGCGCAGCTTCATGACACGATCGCGCGCACGGACCGTCGCGCGCGCCAGAT CCTGGGGCGTGGATTGCGATCCGGGCTCGGCGTCGATCAACGCTGGGTCGTCGAAAACCTGCCGACACCGATCGCCGTGG TCAACGGCTCCGGGGAGCCGTTCGCACGTCTCGACTATGTGGCAGGCATCTCTTATGCCGCCCTCTGGGATCATCGCTGC CACATCATCGACGGCGTCGGCCACGCGCCCTTCCTCGAAGCGCCCGAGCGGTTCAATCCGCTGCTCCTCCGCTTTCTGGG TGATATCCATTGCAGCCGCATCGACGGTACAACGCAGCCACAAATCCGCAGCGTTGCCTGA
Upstream 100 bases:
>100_bases GCGCCGGCTTCGGAAAGAGGCGGATTACTCACAAATCTCTCCTAAATCTTTAACACCTTTTACATTTCATCGTGCCTAGG CTGGGAACAGAGGTAGGAAG
Downstream 100 bases:
>100_bases AAGCTCCAAGCCTTACTCAGCCAAGCCTCACTCAGCCAAACCTTGCCCCGGCCAAAGCGTACCGAGCGCCTGAACTCTTT GAAGGCGTTTCGAAAAGGGT
Product: alpha/beta hydrolase fold
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MLSRTIETSQGRLAFLESSGSGTPVVFIHGNSTCRDVFRHQFETTLAATQRIIAIDLPGHGQSDDALDPQKAYTIPGYAA TLIEALRSLNITRAALVGWSLGGHVSLEMIGQGFDAAGAMIIGAPPIKRGILGMVRGFQAQLDLLLATKSALNARDISRF ARACVGEKHAAQLHDTIARTDRRARQILGRGLRSGLGVDQRWVVENLPTPIAVVNGSGEPFARLDYVAGISYAALWDHRC HIIDGVGHAPFLEAPERFNPLLLRFLGDIHCSRIDGTTQPQIRSVA
Sequences:
>Translated_286_residues MLSRTIETSQGRLAFLESSGSGTPVVFIHGNSTCRDVFRHQFETTLAATQRIIAIDLPGHGQSDDALDPQKAYTIPGYAA TLIEALRSLNITRAALVGWSLGGHVSLEMIGQGFDAAGAMIIGAPPIKRGILGMVRGFQAQLDLLLATKSALNARDISRF ARACVGEKHAAQLHDTIARTDRRARQILGRGLRSGLGVDQRWVVENLPTPIAVVNGSGEPFARLDYVAGISYAALWDHRC HIIDGVGHAPFLEAPERFNPLLLRFLGDIHCSRIDGTTQPQIRSVA >Mature_286_residues MLSRTIETSQGRLAFLESSGSGTPVVFIHGNSTCRDVFRHQFETTLAATQRIIAIDLPGHGQSDDALDPQKAYTIPGYAA TLIEALRSLNITRAALVGWSLGGHVSLEMIGQGFDAAGAMIIGAPPIKRGILGMVRGFQAQLDLLLATKSALNARDISRF ARACVGEKHAAQLHDTIARTDRRARQILGRGLRSGLGVDQRWVVENLPTPIAVVNGSGEPFARLDYVAGISYAALWDHRC HIIDGVGHAPFLEAPERFNPLLLRFLGDIHCSRIDGTTQPQIRSVA
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 30903; Mature: 30903
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRTIETSQGRLAFLESSGSGTPVVFIHGNSTCRDVFRHQFETTLAATQRIIAIDLPGH CCCCCCCCCCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCEEEEEECCCC GQSDDALDPQKAYTIPGYAATLIEALRSLNITRAALVGWSLGGHVSLEMIGQGFDAAGAM CCCCCCCCCCCCEECCCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECCCCCCCCEE IIGAPPIKRGILGMVRGFQAQLDLLLATKSALNARDISRFARACVGEKHAAQLHDTIART EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHH DRRARQILGRGLRSGLGVDQRWVVENLPTPIAVVNGSGEPFARLDYVAGISYAALWDHRC HHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEECCCCCCHHHHHHHHCCHHHHHHCCCE HIIDGVGHAPFLEAPERFNPLLLRFLGDIHCSRIDGTTQPQIRSVA EEEECCCCCCCCCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MLSRTIETSQGRLAFLESSGSGTPVVFIHGNSTCRDVFRHQFETTLAATQRIIAIDLPGH CCCCCCCCCCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCEEEEEECCCC GQSDDALDPQKAYTIPGYAATLIEALRSLNITRAALVGWSLGGHVSLEMIGQGFDAAGAM CCCCCCCCCCCCEECCCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECCCCCCCCEE IIGAPPIKRGILGMVRGFQAQLDLLLATKSALNARDISRFARACVGEKHAAQLHDTIART EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHH DRRARQILGRGLRSGLGVDQRWVVENLPTPIAVVNGSGEPFARLDYVAGISYAALWDHRC HHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEECCCCCCHHHHHHHHCCHHHHHHCCCE HIIDGVGHAPFLEAPERFNPLLLRFLGDIHCSRIDGTTQPQIRSVA EEEECCCCCCCCCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9455482; 9384377 [H]