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The map label for this gene is atpH [H]

Identifier: 229125527

GI number: 229125527

Start: 484429

End: 484989

Strand: Direct

Name: atpH [H]

Synonym: Nwi_0429

Alternate gene names: 229125527

Gene position: 484429-484989 (Clockwise)

Preceding gene: 75674625

Following gene: 75674628

Centisome position: 14.24

GC content: 61.32

Gene sequence:

>561_bases
GTGGCTGCTGTAGATCCCTCGGTTTCTGGTGTGTCCGGCCGTTATGCGACGGCCCTGTTCGAACTCGCGCGTGAAGACAA
ATCGATCGACGCCGTCAAGGCCGACCTCGACAAGTTCGATGCGATGCTGGCGGAGAGCCCTGAACTGGTGCGCCTGGTGC
GCAGTCCGGTTTTCAGCGCCGATACGCAAAGCAAGGCGCTCGCCGCCGTGCTGAGCAAGGCCGGGATCGGTGGCACGACC
GCAAACTTCCTGAAAGTCCTGGCAGCCAACCGCCGTCTGTTCGCGGTGGCGGATGTGATCCGGGCATTTCGCGCGCTGGT
CGCGAAATTCAAGGGCGAGGCCACGGCGGAGGTTACCGTCGCGGAGAAGCTTAACGACAAGAATCTGGACGCGCTGAAGG
CCGCGCTGAAATCAGTGACGGGCAAGGACATCACGCTCAACGTGAAAGTCGATCCGTCCATCATCGGCGGGCTTGTCGTC
AAGCTCGGCAGTCGCATGGTGGACACCTCGCTCCGGACCAAACTCAATTCGATCAAGCACGCGATGAAAGAGGCAGGCTG
A

Upstream 100 bases:

>100_bases
TCGAAGTCCCTCTTGAATTCCAAGGGCTTGGGCCGCTTTGGCGCCGCTTATTCGGCGACGGCTTTTCCCTTGCGAGTTTG
ACAGCTTGAAGAGCGCGGTG

Downstream 100 bases:

>100_bases
TGGACATCCGCGCCGCGGAAATTTCGGCGATCCTGAAGGATCAGATCAAGAATTTCGGCAAGGAAGCCGAAGTTTCGGAA
GTCGGACAGGTGCTGTCCGT

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta [H]

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MAAVDPSVSGVSGRYATALFELAREDKSIDAVKADLDKFDAMLAESPELVRLVRSPVFSADTQSKALAAVLSKAGIGGTT
ANFLKVLAANRRLFAVADVIRAFRALVAKFKGEATAEVTVAEKLNDKNLDALKAALKSVTGKDITLNVKVDPSIIGGLVV
KLGSRMVDTSLRTKLNSIKHAMKEAG

Sequences:

>Translated_186_residues
MAAVDPSVSGVSGRYATALFELAREDKSIDAVKADLDKFDAMLAESPELVRLVRSPVFSADTQSKALAAVLSKAGIGGTT
ANFLKVLAANRRLFAVADVIRAFRALVAKFKGEATAEVTVAEKLNDKNLDALKAALKSVTGKDITLNVKVDPSIIGGLVV
KLGSRMVDTSLRTKLNSIKHAMKEAG
>Mature_185_residues
AAVDPSVSGVSGRYATALFELAREDKSIDAVKADLDKFDAMLAESPELVRLVRSPVFSADTQSKALAAVLSKAGIGGTTA
NFLKVLAANRRLFAVADVIRAFRALVAKFKGEATAEVTVAEKLNDKNLDALKAALKSVTGKDITLNVKVDPSIIGGLVVK
LGSRMVDTSLRTKLNSIKHAMKEAG

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction [H]

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family [H]

Homologues:

Organism=Homo sapiens, GI4502303, Length=180, Percent_Identity=33.8888888888889, Blast_Score=106, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI71984710, Length=180, Percent_Identity=33.3333333333333, Blast_Score=109, Evalue=9e-25,
Organism=Caenorhabditis elegans, GI71984717, Length=181, Percent_Identity=33.1491712707182, Blast_Score=108, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6320504, Length=181, Percent_Identity=32.0441988950276, Blast_Score=90, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24647054, Length=178, Percent_Identity=36.5168539325843, Blast_Score=101, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24647056, Length=98, Percent_Identity=40.8163265306122, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000711
- InterPro:   IPR020781 [H]

Pfam domain/function: PF00213 OSCP [H]

EC number: 3.6.3.14

Molecular weight: Translated: 19614; Mature: 19483

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAVDPSVSGVSGRYATALFELAREDKSIDAVKADLDKFDAMLAESPELVRLVRSPVFSA
CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC
DTQSKALAAVLSKAGIGGTTANFLKVLAANRRLFAVADVIRAFRALVAKFKGEATAEVTV
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHEEHH
AEKLNDKNLDALKAALKSVTGKDITLNVKVDPSIIGGLVVKLGSRMVDTSLRTKLNSIKH
HHHCCCCCHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMKEAG
HHHHCC
>Mature Secondary Structure 
AAVDPSVSGVSGRYATALFELAREDKSIDAVKADLDKFDAMLAESPELVRLVRSPVFSA
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC
DTQSKALAAVLSKAGIGGTTANFLKVLAANRRLFAVADVIRAFRALVAKFKGEATAEVTV
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHEEHH
AEKLNDKNLDALKAALKSVTGKDITLNVKVDPSIIGGLVVKLGSRMVDTSLRTKLNSIKH
HHHCCCCCHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMKEAG
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA