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The map label for this gene is qseC [H]

Identifier: 74318810

GI number: 74318810

Start: 2872496

End: 2873830

Strand: Direct

Name: qseC [H]

Synonym: Tbd_2792

Alternate gene names: 74318810

Gene position: 2872496-2873830 (Clockwise)

Preceding gene: 74318809

Following gene: 74318827

Centisome position: 98.72

GC content: 71.16

Gene sequence:

>1335_bases
ATGAGCCTGCGCCTGCGTCTGCTGCTGATGATCGGGGTGTCGCTGAGCCTGTTGTGGGGCGGGGTCGCGATGTGGATGCT
GCACGATCTGGAAGGTGAAATGCGCCGCACGCTCGATCAGCGGCTCGCGATGTCGGCACGCATGGTGGCCGGGCTGGTCG
CACAGAATCCGGCGGCGTGGGACACGGTCGACGGTGCCGGCCCCGCCCCGCTGACCGTGCCGGCGACCGCGAAGGGGCTC
GCCTGCCAAGTCAGTTCGCTGCGCGGCGAAGTCCTCGCGCGCACGCCCGGCGCGGCGCCCGCCGCGATCGCGACGGTGAC
GCCGGGATTTGCCGAGCGCGAGATCGACGGCGAACGCTGGCGCAGTTATACCGTCGAGGCGCAGGGTGTGCGGATCACCA
CGGCGGACCGCCTGGCCGAGCGCGACGATCTGCTGCGCGACGTGATCGCCGCTGCGGTCGTGCCCTTCGTCGTCGCGCTC
GTCGGCAGCCTGGCGATGCTCTGGATCGGGGTCAGAAGCGGGCTCGTCCCGCTCGAGCGACTGCGCCAGGCCCTCGCCCG
ACGGGCGCCGGACGCGCTGACACCTATCCCCGACGCACCCATGCCACGCGAGCTGCAACCGCTGGTCGACGCCCTGAACC
AGCTGCTCGAACGAATGCGCACCGCCATCGCGCGCGAACGCCGTTTTACCAGCGACGTCGCGCACGAACTGCGGACGCCG
CTGACCGCGGTCAAGACCCACCTGCAGGTCGCCCGCATCACGCACGGCGCGGCCGCGGAGACGGCGCTCGATTTCGCCGA
AGAGGGCGCGTCGCGCCTGCAACATACCCTGCAGCAGCTGCTGACGCTGGCGCAGGTCGAGGGCCCGTTTTCCTGGGACG
AGACCGAGCGTGCTTACGCCGACGAGGTCGCTCGCCTCGCGATCCGGGACGCGGCACCCGAAGCGCCCGGCCGCATCGTC
TTCGAAAGCCACGGTGTTCCGGCCGAACTCGCGCTGCCCCAGGCGCTCGCCGTGACCGCGCTGCGCAACCTGCTCGACAA
CGCGCTGTGCCATTCCCCGTCGGAGCAAAGCATCACGCTGGAAATCGAGGCCGGGCCGGACGACGTCCGTTTTCGCGTAC
GCGACAGCGGACCCGGCCTGCTCCCCGACGAACTCGCGCGCGTCACGGAACGCTTCTGGCGGCGTGACCGCGGGCGCGGG
AGTGGATTGGGGCTGGCGATCGTGCTCGCGATCGCCGAGCGCTGCGGAGGCTCGCTCTCGCTGGCGCCACCCGCGACGGG
CGGACTGGAAGCCGAACTGCGCTTGCCGCGCGCTGAACGCGATCGCGCGAGTTGA

Upstream 100 bases:

>100_bases
ACGCACTGAGCGTGCATATCCACCACCTGCGGCGCAAGCTCGGCGCCGACCTGATCGAGACCGTGCGCGGCCTCGGCTAC
CGCTTCAACATGTCAGACGC

Downstream 100 bases:

>100_bases
AGGCCCCCACGGGGCGTTTCAGCGAGCGGGTCGGACCCGCGCGGAAAGCGCGGGGATGCGGATGTAAAACCTTGATCATG
GCGACGCCGGCACGCTCCGC

Product: periplasmic sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 443

Protein sequence:

>444_residues
MSLRLRLLLMIGVSLSLLWGGVAMWMLHDLEGEMRRTLDQRLAMSARMVAGLVAQNPAAWDTVDGAGPAPLTVPATAKGL
ACQVSSLRGEVLARTPGAAPAAIATVTPGFAEREIDGERWRSYTVEAQGVRITTADRLAERDDLLRDVIAAAVVPFVVAL
VGSLAMLWIGVRSGLVPLERLRQALARRAPDALTPIPDAPMPRELQPLVDALNQLLERMRTAIARERRFTSDVAHELRTP
LTAVKTHLQVARITHGAAAETALDFAEEGASRLQHTLQQLLTLAQVEGPFSWDETERAYADEVARLAIRDAAPEAPGRIV
FESHGVPAELALPQALAVTALRNLLDNALCHSPSEQSITLEIEAGPDDVRFRVRDSGPGLLPDELARVTERFWRRDRGRG
SGLGLAIVLAIAERCGGSLSLAPPATGGLEAELRLPRAERDRAS

Sequences:

>Translated_444_residues
MSLRLRLLLMIGVSLSLLWGGVAMWMLHDLEGEMRRTLDQRLAMSARMVAGLVAQNPAAWDTVDGAGPAPLTVPATAKGL
ACQVSSLRGEVLARTPGAAPAAIATVTPGFAEREIDGERWRSYTVEAQGVRITTADRLAERDDLLRDVIAAAVVPFVVAL
VGSLAMLWIGVRSGLVPLERLRQALARRAPDALTPIPDAPMPRELQPLVDALNQLLERMRTAIARERRFTSDVAHELRTP
LTAVKTHLQVARITHGAAAETALDFAEEGASRLQHTLQQLLTLAQVEGPFSWDETERAYADEVARLAIRDAAPEAPGRIV
FESHGVPAELALPQALAVTALRNLLDNALCHSPSEQSITLEIEAGPDDVRFRVRDSGPGLLPDELARVTERFWRRDRGRG
SGLGLAIVLAIAERCGGSLSLAPPATGGLEAELRLPRAERDRAS
>Mature_443_residues
SLRLRLLLMIGVSLSLLWGGVAMWMLHDLEGEMRRTLDQRLAMSARMVAGLVAQNPAAWDTVDGAGPAPLTVPATAKGLA
CQVSSLRGEVLARTPGAAPAAIATVTPGFAEREIDGERWRSYTVEAQGVRITTADRLAERDDLLRDVIAAAVVPFVVALV
GSLAMLWIGVRSGLVPLERLRQALARRAPDALTPIPDAPMPRELQPLVDALNQLLERMRTAIARERRFTSDVAHELRTPL
TAVKTHLQVARITHGAAAETALDFAEEGASRLQHTLQQLLTLAQVEGPFSWDETERAYADEVARLAIRDAAPEAPGRIVF
ESHGVPAELALPQALAVTALRNLLDNALCHSPSEQSITLEIEAGPDDVRFRVRDSGPGLLPDELARVTERFWRRDRGRGS
GLGLAIVLAIAERCGGSLSLAPPATGGLEAELRLPRAERDRAS

Specific function: Member of a two-component regulatory system qseB/qseC. May activate qseB by phosphorylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=338, Percent_Identity=33.4319526627219, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1790551, Length=312, Percent_Identity=31.0897435897436, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1786600, Length=225, Percent_Identity=30.6666666666667, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1786783, Length=345, Percent_Identity=26.3768115942029, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1788393, Length=286, Percent_Identity=31.1188811188811, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1790861, Length=301, Percent_Identity=29.2358803986711, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788279, Length=301, Percent_Identity=28.5714285714286, Blast_Score=85, Evalue=9e-18,
Organism=Escherichia coli, GI1787894, Length=238, Percent_Identity=31.9327731092437, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1790346, Length=252, Percent_Identity=29.7619047619048, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 47925; Mature: 47794

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRLRLLLMIGVSLSLLWGGVAMWMLHDLEGEMRRTLDQRLAMSARMVAGLVAQNPAAW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DTVDGAGPAPLTVPATAKGLACQVSSLRGEVLARTPGAAPAAIATVTPGFAEREIDGERW
CCCCCCCCCCEECCCCCCCHHHHHHHHCCHHHCCCCCCCCCHHHCCCCCCHHHCCCHHHH
RSYTVEAQGVRITTADRLAERDDLLRDVIAAAVVPFVVALVGSLAMLWIGVRSGLVPLER
HEEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LRQALARRAPDALTPIPDAPMPRELQPLVDALNQLLERMRTAIARERRFTSDVAHELRTP
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LTAVKTHLQVARITHGAAAETALDFAEEGASRLQHTLQQLLTLAQVEGPFSWDETERAYA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
DEVARLAIRDAAPEAPGRIVFESHGVPAELALPQALAVTALRNLLDNALCHSPSEQSITL
HHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
EIEAGPDDVRFRVRDSGPGLLPDELARVTERFWRRDRGRGSGLGLAIVLAIAERCGGSLS
EEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEE
LAPPATGGLEAELRLPRAERDRAS
ECCCCCCCCCCEEECCCCCCCCCC
>Mature Secondary Structure 
SLRLRLLLMIGVSLSLLWGGVAMWMLHDLEGEMRRTLDQRLAMSARMVAGLVAQNPAAW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DTVDGAGPAPLTVPATAKGLACQVSSLRGEVLARTPGAAPAAIATVTPGFAEREIDGERW
CCCCCCCCCCEECCCCCCCHHHHHHHHCCHHHCCCCCCCCCHHHCCCCCCHHHCCCHHHH
RSYTVEAQGVRITTADRLAERDDLLRDVIAAAVVPFVVALVGSLAMLWIGVRSGLVPLER
HEEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LRQALARRAPDALTPIPDAPMPRELQPLVDALNQLLERMRTAIARERRFTSDVAHELRTP
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LTAVKTHLQVARITHGAAAETALDFAEEGASRLQHTLQQLLTLAQVEGPFSWDETERAYA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
DEVARLAIRDAAPEAPGRIVFESHGVPAELALPQALAVTALRNLLDNALCHSPSEQSITL
HHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
EIEAGPDDVRFRVRDSGPGLLPDELARVTERFWRRDRGRGSGLGLAIVLAIAERCGGSLS
EEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEE
LAPPATGGLEAELRLPRAERDRAS
ECCCCCCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]