Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74318827

Identifier: 74318827

GI number: 74318827

Start: 2889949

End: 2890605

Strand: Direct

Name: 74318827

Synonym: Tbd_2809

Alternate gene names: NA

Gene position: 2889949-2890605 (Clockwise)

Preceding gene: 74318810

Following gene: 74318832

Centisome position: 99.32

GC content: 55.56

Gene sequence:

>657_bases
ATGAAGGGAAACTTAGCCAGCCTGCTGGCAGCAAGCACGCTGCTGCTTTATGGGCCGTCATACGGCGCATACGCAACAAA
AGGTAGCGTTTACATGATTTCGGAGCCCGGCAACTACGTTGGAGCCGGCATGACGCAAGGCGTCACCTGGGTTCATGGGG
TCGACGGTCTTTTCTCCGAAAGCGTGAATTACGACAAGGGCGCAAGTATCACCTACAACGGTGACTCTTGGTTCTATTTC
GATTTCGCGGCCCCAACTTATAACCCCTCAACCAATACAACCGACGGCAATTACCTGGCTGTCGGCCGTTACGACAACGC
CACACGTTTCCCTTTTAATTCGCCGACCAAGCCCGGCTTGGATGTGTCTGGGGATGGACGGGGAAACAATCAGCTGTCGG
GATGGTTTGAGATACTCGAGGTCGAATATGATGTCAGCAAGACCCACATCCAGAAGCTCGCCGTCGATTTCACCCAGTAC
GGAGAAAACCTGACGCAGTCTGGGCCGGGCCTATTCGGCTCTCTTCGGTTCAATTCCGACGTTGCTCTGACCATTCCCTC
GGCCGTCCCCGAACCAAGCACCTACCTCACCATGGCGCTCGGGATAGGGTTAGTAGCACTTGCGACTCGCAGGCGCAAAG
CGGCCTCCGAGGTCTAA

Upstream 100 bases:

>100_bases
AAGCATTTACTGATAGCATCCTGCTGCGGAGAAAAACCAGATAACAAAAACATCGCGGGGTCAAATTCGGCCCAATTACT
GTTTTCTCACGGGAGGAGAT

Downstream 100 bases:

>100_bases
AACGCCTCGGAGGCAGGCTCACTTCGGACTGCCTCCGAGCGCTTCCTGCCGCATCAAAGCGTCGAGTAGTTCGTCGTCGA
TAGCCGTCAATCGTGCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MKGNLASLLAASTLLLYGPSYGAYATKGSVYMISEPGNYVGAGMTQGVTWVHGVDGLFSESVNYDKGASITYNGDSWFYF
DFAAPTYNPSTNTTDGNYLAVGRYDNATRFPFNSPTKPGLDVSGDGRGNNQLSGWFEILEVEYDVSKTHIQKLAVDFTQY
GENLTQSGPGLFGSLRFNSDVALTIPSAVPEPSTYLTMALGIGLVALATRRRKAASEV

Sequences:

>Translated_218_residues
MKGNLASLLAASTLLLYGPSYGAYATKGSVYMISEPGNYVGAGMTQGVTWVHGVDGLFSESVNYDKGASITYNGDSWFYF
DFAAPTYNPSTNTTDGNYLAVGRYDNATRFPFNSPTKPGLDVSGDGRGNNQLSGWFEILEVEYDVSKTHIQKLAVDFTQY
GENLTQSGPGLFGSLRFNSDVALTIPSAVPEPSTYLTMALGIGLVALATRRRKAASEV
>Mature_218_residues
MKGNLASLLAASTLLLYGPSYGAYATKGSVYMISEPGNYVGAGMTQGVTWVHGVDGLFSESVNYDKGASITYNGDSWFYF
DFAAPTYNPSTNTTDGNYLAVGRYDNATRFPFNSPTKPGLDVSGDGRGNNQLSGWFEILEVEYDVSKTHIQKLAVDFTQY
GENLTQSGPGLFGSLRFNSDVALTIPSAVPEPSTYLTMALGIGLVALATRRRKAASEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23381; Mature: 23381

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGNLASLLAASTLLLYGPSYGAYATKGSVYMISEPGNYVGAGMTQGVTWVHGVDGLFSE
CCCHHHHHHHHHEEEEECCCCCCEEECCEEEEEECCCCEECCCCCCCEEEEECCCCHHHC
SVNYDKGASITYNGDSWFYFDFAAPTYNPSTNTTDGNYLAVGRYDNATRFPFNSPTKPGL
CCCCCCCCEEEECCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
DVSGDGRGNNQLSGWFEILEVEYDVSKTHIQKLAVDFTQYGENLTQSGPGLFGSLRFNSD
CCCCCCCCCCCHHCEEEEEEEEECCCHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCC
VALTIPSAVPEPSTYLTMALGIGLVALATRRRKAASEV
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKGNLASLLAASTLLLYGPSYGAYATKGSVYMISEPGNYVGAGMTQGVTWVHGVDGLFSE
CCCHHHHHHHHHEEEEECCCCCCEEECCEEEEEECCCCEECCCCCCCEEEEECCCCHHHC
SVNYDKGASITYNGDSWFYFDFAAPTYNPSTNTTDGNYLAVGRYDNATRFPFNSPTKPGL
CCCCCCCCEEEECCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
DVSGDGRGNNQLSGWFEILEVEYDVSKTHIQKLAVDFTQYGENLTQSGPGLFGSLRFNSD
CCCCCCCCCCCHHCEEEEEEEEECCCHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCC
VALTIPSAVPEPSTYLTMALGIGLVALATRRRKAASEV
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA