| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is lnt [H]
Identifier: 74318602
GI number: 74318602
Start: 2659209
End: 2660771
Strand: Direct
Name: lnt [H]
Synonym: Tbd_2584
Alternate gene names: 74318602
Gene position: 2659209-2660771 (Clockwise)
Preceding gene: 74318601
Following gene: 74318606
Centisome position: 91.39
GC content: 69.29
Gene sequence:
>1563_bases TTGAGTCGGCGCGCTGAGGTCTTCGCCGGCACCGCGCCCGCCCTCCCGCGCCGCCTGCCGTTCGCGCAACTGCTGATCCC GCTTATCGCCGGCGTGGCGGCAGTCGCGGGTTTTGCGCCCTTCGGCCTGTGGCCGCTGCCGATCCTCAGCCTCGCCGTGC TCTTCGTCATGCTCGAACGCGCGCCCTCGCTGCGCGCGGGCTTGGCGCTGGGCTTCGCATGGGGACTCGGTTTTTTCCTC ACCGGCGTGAGCTGGGTCTACGTCAGCCTCTCCGTCTACGGCGGTATGCCGGCATGGCTCGCGGGTCTGGCAACGTTCCT GTTCTGCGGGTTTCTCGCGCTCTTTCCGGCGGCGGTCGGTGGTTTGCACGCGCGCCTTCGGGGGCATCAACGCACGCCGC TTGCACCCGTCGTGCGCCTCCTGGTCCTGCTCCCGATGCTGTGGGGCGCGAGCGAATGGGTGCGCGGCTGGATTTTCACC GGCTTCCCTTGGCTGGTCGTCGGCTATTCCCAAGTTCCCGCGAGTCCGCTCGCCGGCTACGCGCCGCTCACCGGCGTGTA CGGCGTGTCATTCGTGCTGGCGTCGCTTGCCGCACTGCTGACCTGGCTGCTCACGCCGGGGCGAAGGCTGGCGGCGCGCG CATGGGCGCTGGGGGCGATCGCGGTGGCGCTGTTTGGCGGGCAGCTTTTACGCGGCGTCGCGTGGACGACGCCGGACGGC GGGCCGACTTCGGTCGCGCTGCTGCAAGGCAACGTCCCCCAGGCGATGAAATGGCAGCCCGAGCGCACGCTTCCCACGCT CGAAACCTATCTGCGGATGGCGGCGGCCTCCCCGGCACGTCTGATCGTGCTGCCCGAGACCGCGCTGCCGCTGTTCGAAT CCGATCTGCCCGAGCGCTACCGCGAGCGGCTCGCCGAGCTCGGCAGGGCCAATGGCGGCGACGTGCTCGCCGGCCTGCCG ACCGGCTCCTACGAGCACGGCTACTACAACAGCGTGATCAGCCTCGGCAGCGCGCCCGGGCAGCGCTACCACAAGATTCA CCTGGTGCCGTTCGGCGAATACATTCCGCTCAGGGCACTGTGGGGCTGGGTCGTCGAGGTGCTGCACATTCCGCTGTCGG ATTTCTCGCGCGGCGGGGTCGAGCAGCGCCCGCTCGCGATCGGCGGCCAGCGCGTCGCGGCAGACATCTGCTATGAGGAC GCTTTCGGCGAGGAAATCATCCGCCAGCTGCCGGAAGCGAGCGTGCTCGTGAACGTGAGCAACCTCGCCTGGTTCGGCGA CTCGTTCGCGCCGTGGCAGCACGTGCAGATGTCGCAGATGCGGGCGCTCGAGAGCGGACGCATGATGCTGCGCGCGACCA ATACCGGGGTCACGGCGATCATCGATGCACGCGGAAACCTGCTCGCCAGCCTGCCCCTGTTCACGGCCGGCAGCCTGACC GGCGAAATCCAGGGCTATGCGGGGAGCACACCGTATGTGCGCTGGGGCAACGCGCCGGTGCTCGCGCTATGGGGCGTGAT CGGGGTCGGGCTCCTCGCCCTTCGATTCAGGCGCTCGCCCTGA
Upstream 100 bases:
>100_bases ACCTCGAAAAGTCTTGCGAGCCAGGGCGACAACACGCCCTTCCTCAACCACCCGATGCAAGGGCGCGTGCGCTATACCCT GATCGACGGACATATCGATT
Downstream 100 bases:
>100_bases CGCGGGTCGCGTTGCGGCCGCCGCGCTTGGCTTCGAGCAAGGCCGCGTCGGCGCGCGCGAGCGCCTCATTCTCGCCCCCG TCATCACGGCTGTATTCGGA
Product: apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: ALP N-acyltransferase [H]
Number of amino acids: Translated: 520; Mature: 519
Protein sequence:
>520_residues MSRRAEVFAGTAPALPRRLPFAQLLIPLIAGVAAVAGFAPFGLWPLPILSLAVLFVMLERAPSLRAGLALGFAWGLGFFL TGVSWVYVSLSVYGGMPAWLAGLATFLFCGFLALFPAAVGGLHARLRGHQRTPLAPVVRLLVLLPMLWGASEWVRGWIFT GFPWLVVGYSQVPASPLAGYAPLTGVYGVSFVLASLAALLTWLLTPGRRLAARAWALGAIAVALFGGQLLRGVAWTTPDG GPTSVALLQGNVPQAMKWQPERTLPTLETYLRMAAASPARLIVLPETALPLFESDLPERYRERLAELGRANGGDVLAGLP TGSYEHGYYNSVISLGSAPGQRYHKIHLVPFGEYIPLRALWGWVVEVLHIPLSDFSRGGVEQRPLAIGGQRVAADICYED AFGEEIIRQLPEASVLVNVSNLAWFGDSFAPWQHVQMSQMRALESGRMMLRATNTGVTAIIDARGNLLASLPLFTAGSLT GEIQGYAGSTPYVRWGNAPVLALWGVIGVGLLALRFRRSP
Sequences:
>Translated_520_residues MSRRAEVFAGTAPALPRRLPFAQLLIPLIAGVAAVAGFAPFGLWPLPILSLAVLFVMLERAPSLRAGLALGFAWGLGFFL TGVSWVYVSLSVYGGMPAWLAGLATFLFCGFLALFPAAVGGLHARLRGHQRTPLAPVVRLLVLLPMLWGASEWVRGWIFT GFPWLVVGYSQVPASPLAGYAPLTGVYGVSFVLASLAALLTWLLTPGRRLAARAWALGAIAVALFGGQLLRGVAWTTPDG GPTSVALLQGNVPQAMKWQPERTLPTLETYLRMAAASPARLIVLPETALPLFESDLPERYRERLAELGRANGGDVLAGLP TGSYEHGYYNSVISLGSAPGQRYHKIHLVPFGEYIPLRALWGWVVEVLHIPLSDFSRGGVEQRPLAIGGQRVAADICYED AFGEEIIRQLPEASVLVNVSNLAWFGDSFAPWQHVQMSQMRALESGRMMLRATNTGVTAIIDARGNLLASLPLFTAGSLT GEIQGYAGSTPYVRWGNAPVLALWGVIGVGLLALRFRRSP >Mature_519_residues SRRAEVFAGTAPALPRRLPFAQLLIPLIAGVAAVAGFAPFGLWPLPILSLAVLFVMLERAPSLRAGLALGFAWGLGFFLT GVSWVYVSLSVYGGMPAWLAGLATFLFCGFLALFPAAVGGLHARLRGHQRTPLAPVVRLLVLLPMLWGASEWVRGWIFTG FPWLVVGYSQVPASPLAGYAPLTGVYGVSFVLASLAALLTWLLTPGRRLAARAWALGAIAVALFGGQLLRGVAWTTPDGG PTSVALLQGNVPQAMKWQPERTLPTLETYLRMAAASPARLIVLPETALPLFESDLPERYRERLAELGRANGGDVLAGLPT GSYEHGYYNSVISLGSAPGQRYHKIHLVPFGEYIPLRALWGWVVEVLHIPLSDFSRGGVEQRPLAIGGQRVAADICYEDA FGEEIIRQLPEASVLVNVSNLAWFGDSFAPWQHVQMSQMRALESGRMMLRATNTGVTAIIDARGNLLASLPLFTAGSLTG EIQGYAGSTPYVRWGNAPVLALWGVIGVGLLALRFRRSP
Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]
COG id: COG0815
COG function: function code M; Apolipoprotein N-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1786878, Length=515, Percent_Identity=37.0873786407767, Blast_Score=303, Evalue=2e-83,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004563 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 55907; Mature: 55776
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRAEVFAGTAPALPRRLPFAQLLIPLIAGVAAVAGFAPFGLWPLPILSLAVLFVMLER CCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC APSLRAGLALGFAWGLGFFLTGVSWVYVSLSVYGGMPAWLAGLATFLFCGFLALFPAAVG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH GLHARLRGHQRTPLAPVVRLLVLLPMLWGASEWVRGWIFTGFPWLVVGYSQVPASPLAGY HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHEEECHHCCCCCCCCC APLTGVYGVSFVLASLAALLTWLLTPGRRLAARAWALGAIAVALFGGQLLRGVAWTTPDG CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCC GPTSVALLQGNVPQAMKWQPERTLPTLETYLRMAAASPARLIVLPETALPLFESDLPERY CCCEEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCHHHH RERLAELGRANGGDVLAGLPTGSYEHGYYNSVISLGSAPGQRYHKIHLVPFGEYIPLRAL HHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHH WGWVVEVLHIPLSDFSRGGVEQRPLAIGGQRVAADICYEDAFGEEIIRQLPEASVLVNVS HHHHHHHHHCCHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEH NLAWFGDSFAPWQHVQMSQMRALESGRMMLRATNTGVTAIIDARGNLLASLPLFTAGSLT HHEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCEEECCCHHCCCCCC GEIQGYAGSTPYVRWGNAPVLALWGVIGVGLLALRFRRSP CEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SRRAEVFAGTAPALPRRLPFAQLLIPLIAGVAAVAGFAPFGLWPLPILSLAVLFVMLER CCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC APSLRAGLALGFAWGLGFFLTGVSWVYVSLSVYGGMPAWLAGLATFLFCGFLALFPAAVG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH GLHARLRGHQRTPLAPVVRLLVLLPMLWGASEWVRGWIFTGFPWLVVGYSQVPASPLAGY HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHEEECHHCCCCCCCCC APLTGVYGVSFVLASLAALLTWLLTPGRRLAARAWALGAIAVALFGGQLLRGVAWTTPDG CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCC GPTSVALLQGNVPQAMKWQPERTLPTLETYLRMAAASPARLIVLPETALPLFESDLPERY CCCEEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCHHHH RERLAELGRANGGDVLAGLPTGSYEHGYYNSVISLGSAPGQRYHKIHLVPFGEYIPLRAL HHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHH WGWVVEVLHIPLSDFSRGGVEQRPLAIGGQRVAADICYEDAFGEEIIRQLPEASVLVNVS HHHHHHHHHCCHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEH NLAWFGDSFAPWQHVQMSQMRALESGRMMLRATNTGVTAIIDARGNLLASLPLFTAGSLT HHEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCEEECCCHHCCCCCC GEIQGYAGSTPYVRWGNAPVLALWGVIGVGLLALRFRRSP CEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12700255 [H]