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The map label for this gene is rng [H]

Identifier: 74318455

GI number: 74318455

Start: 2507340

End: 2508791

Strand: Reverse

Name: rng [H]

Synonym: Tbd_2437

Alternate gene names: 74318455

Gene position: 2508791-2507340 (Counterclockwise)

Preceding gene: 74318456

Following gene: 74318454

Centisome position: 86.22

GC content: 64.12

Gene sequence:

>1452_bases
ATGAGCGAAGAAATCCTCGTCAACGTCACGCCGCAGGAAACGCGCGTCGCCGTGCTCCACCTCGGCGCGGTCCAGGAGCT
GCACATCGAGCGCGCCAAATGCCGCGGACTCGTGAGCAACATCTACATGGGGCGCGTCGTGCGTGTGCTGCCCGGGATGC
AGTCGGCCTTCATCGACATCGGGCTCGAACGCGCGGCCTTCCTGCACGTCGCCGACATCTGGGAGGAGCGCCACAACGGC
GAGACGGAACGCCCGATCGAGCAGATCCTGCACGAAGGCCAGAACCTGATGGTGCAGGTGATCAAGGACCCGATCGGCAC
CAAGGGTGCGCGGCTGTCGACGCAGATCAGCTTCGCAGGGCGCTACCTCGTCTACCTGCCGCAGGAAACCCATATCGGCA
TCTCGCAGAAGATCGAAGGCGAGGAAGAGCGCGAACAGTTGCGCCAGAAGCTGCACCAGCTGATTCCGCAGGACGCGACC
GGCGGATTCATCGTCCGCACGATGGCCGAGACCGCCGAGGACGCCGAGATGCTCGCCGACATCGACTACCTCAGACGCCT
GTGGAGCAGCATCCAGTCGCGCGGCAATTGCGTCGTGCCGTGCCTGCTCTATCAGGACCTCGACCTGTCGCTGCGCGTAC
TGCGCGACTTCGTCAACCGCGACACGACGCGCATCCTGATCGACTCGCGCGAAACCTACCAGCGCATGGCCGAGTTCGCG
CAGAACTACACCCATGCCGTGCTCGACAAGCTGCAGCACTACGGCGCCGACCGGCCGCTGTTCGACCTGCACGCGATCGA
GGACGAAATCGCCAAGGCGCTCGGGCGCCGCGTCGACCTCAAGTCGGGCGGCTATCTCATCATCGACCAGACCGAGGCAC
TGACGACGGTCGACGTCAATACCGGCGGCTTCGTCGGCGCGCGCAACTTCGACGACACGATCTTCAAGACCAACCTCGAG
GCCGCGCAGGCGATCGCGCGCCAATTGCGGTTGCGAAACCTCGGCGGCATCATCATCATCGACTTCATCGACATGGACAA
CGTCGAGCATCAGGATGCGGTGCTGACCGAGTTGAAGAAAGCACTCACGCGCGATCCGACCCGCACGACCGTGAGCGGAT
TTTCCACGCTCGGCCTCGTCGAGATGACGCGGAAGCGGACCCGCGAATCGCTCGCGCACGTGCTCTGCGAGCCCTGTCCG
ACCTGCGCCGGTCGCGGCGAAATCAAGACCGCGCAGACCGTGTGCTACGACGTGCTGCGCGAGATCCTGCGCGAGGCTCG
CCAGTTCGACGCGCGTGAATACCGCATCCTCGCGGCACAAAGCGTGATCGACCTGTTCCTCGACGAGGAATCGGGCAGCC
TCGCCCAGCTCATCGACTTCATCGGCAAACCGGTGTCGCTGCAGGTCGAGACGACCTATCCGCAGGAGCAGTACGACATC
ATCCTGCTGTGA

Upstream 100 bases:

>100_bases
CTCGAGGGCAGCTACAGCGGCGTCATGGGTCTGCCGTTATACGAGACTGCCGCCTTACTGAGGGAATTCGGTCTCGCCGT
CTGAGCGCCGCCGCTGCACC

Downstream 100 bases:

>100_bases
GGGGTCAGGGGTCAGGGGTCAGGGGTCAGGGGTCAGGGGTCAGGGGTCAGGGGTCAGGGGGCGCGATTGTTCCATCTTGT
AATGAACTCCATCCCGGCGA

Product: RNAse G

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 483; Mature: 482

Protein sequence:

>483_residues
MSEEILVNVTPQETRVAVLHLGAVQELHIERAKCRGLVSNIYMGRVVRVLPGMQSAFIDIGLERAAFLHVADIWEERHNG
ETERPIEQILHEGQNLMVQVIKDPIGTKGARLSTQISFAGRYLVYLPQETHIGISQKIEGEEEREQLRQKLHQLIPQDAT
GGFIVRTMAETAEDAEMLADIDYLRRLWSSIQSRGNCVVPCLLYQDLDLSLRVLRDFVNRDTTRILIDSRETYQRMAEFA
QNYTHAVLDKLQHYGADRPLFDLHAIEDEIAKALGRRVDLKSGGYLIIDQTEALTTVDVNTGGFVGARNFDDTIFKTNLE
AAQAIARQLRLRNLGGIIIIDFIDMDNVEHQDAVLTELKKALTRDPTRTTVSGFSTLGLVEMTRKRTRESLAHVLCEPCP
TCAGRGEIKTAQTVCYDVLREILREARQFDAREYRILAAQSVIDLFLDEESGSLAQLIDFIGKPVSLQVETTYPQEQYDI
ILL

Sequences:

>Translated_483_residues
MSEEILVNVTPQETRVAVLHLGAVQELHIERAKCRGLVSNIYMGRVVRVLPGMQSAFIDIGLERAAFLHVADIWEERHNG
ETERPIEQILHEGQNLMVQVIKDPIGTKGARLSTQISFAGRYLVYLPQETHIGISQKIEGEEEREQLRQKLHQLIPQDAT
GGFIVRTMAETAEDAEMLADIDYLRRLWSSIQSRGNCVVPCLLYQDLDLSLRVLRDFVNRDTTRILIDSRETYQRMAEFA
QNYTHAVLDKLQHYGADRPLFDLHAIEDEIAKALGRRVDLKSGGYLIIDQTEALTTVDVNTGGFVGARNFDDTIFKTNLE
AAQAIARQLRLRNLGGIIIIDFIDMDNVEHQDAVLTELKKALTRDPTRTTVSGFSTLGLVEMTRKRTRESLAHVLCEPCP
TCAGRGEIKTAQTVCYDVLREILREARQFDAREYRILAAQSVIDLFLDEESGSLAQLIDFIGKPVSLQVETTYPQEQYDI
ILL
>Mature_482_residues
SEEILVNVTPQETRVAVLHLGAVQELHIERAKCRGLVSNIYMGRVVRVLPGMQSAFIDIGLERAAFLHVADIWEERHNGE
TERPIEQILHEGQNLMVQVIKDPIGTKGARLSTQISFAGRYLVYLPQETHIGISQKIEGEEEREQLRQKLHQLIPQDATG
GFIVRTMAETAEDAEMLADIDYLRRLWSSIQSRGNCVVPCLLYQDLDLSLRVLRDFVNRDTTRILIDSRETYQRMAEFAQ
NYTHAVLDKLQHYGADRPLFDLHAIEDEIAKALGRRVDLKSGGYLIIDQTEALTTVDVNTGGFVGARNFDDTIFKTNLEA
AQAIARQLRLRNLGGIIIIDFIDMDNVEHQDAVLTELKKALTRDPTRTTVSGFSTLGLVEMTRKRTRESLAHVLCEPCPT
CAGRGEIKTAQTVCYDVLREILREARQFDAREYRILAAQSVIDLFLDEESGSLAQLIDFIGKPVSLQVETTYPQEQYDII
LL

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=491, Percent_Identity=54.1751527494908, Blast_Score=518, Evalue=1e-148,
Organism=Escherichia coli, GI1787325, Length=464, Percent_Identity=36.6379310344828, Blast_Score=268, Evalue=4e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 54645; Mature: 54514

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEEILVNVTPQETRVAVLHLGAVQELHIERAKCRGLVSNIYMGRVVRVLPGMQSAFIDI
CCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
GLERAAFLHVADIWEERHNGETERPIEQILHEGQNLMVQVIKDPIGTKGARLSTQISFAG
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEEEECC
RYLVYLPQETHIGISQKIEGEEEREQLRQKLHQLIPQDATGGFIVRTMAETAEDAEMLAD
EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHH
IDYLRRLWSSIQSRGNCVVPCLLYQDLDLSLRVLRDFVNRDTTRILIDSRETYQRMAEFA
HHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
QNYTHAVLDKLQHYGADRPLFDLHAIEDEIAKALGRRVDLKSGGYLIIDQTEALTTVDVN
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCEEEEECCCCEEEEECC
TGGFVGARNFDDTIFKTNLEAAQAIARQLRLRNLGGIIIIDFIDMDNVEHQDAVLTELKK
CCCEEECCCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHH
ALTRDPTRTTVSGFSTLGLVEMTRKRTRESLAHVLCEPCPTCAGRGEIKTAQTVCYDVLR
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
EILREARQFDAREYRILAAQSVIDLFLDEESGSLAQLIDFIGKPVSLQVETTYPQEQYDI
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCE
ILL
EEC
>Mature Secondary Structure 
SEEILVNVTPQETRVAVLHLGAVQELHIERAKCRGLVSNIYMGRVVRVLPGMQSAFIDI
CCCEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
GLERAAFLHVADIWEERHNGETERPIEQILHEGQNLMVQVIKDPIGTKGARLSTQISFAG
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEEEECC
RYLVYLPQETHIGISQKIEGEEEREQLRQKLHQLIPQDATGGFIVRTMAETAEDAEMLAD
EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHH
IDYLRRLWSSIQSRGNCVVPCLLYQDLDLSLRVLRDFVNRDTTRILIDSRETYQRMAEFA
HHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
QNYTHAVLDKLQHYGADRPLFDLHAIEDEIAKALGRRVDLKSGGYLIIDQTEALTTVDVN
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCEEEEECCCCEEEEECC
TGGFVGARNFDDTIFKTNLEAAQAIARQLRLRNLGGIIIIDFIDMDNVEHQDAVLTELKK
CCCEEECCCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHH
ALTRDPTRTTVSGFSTLGLVEMTRKRTRESLAHVLCEPCPTCAGRGEIKTAQTVCYDVLR
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
EILREARQFDAREYRILAAQSVIDLFLDEESGSLAQLIDFIGKPVSLQVETTYPQEQYDI
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCE
ILL
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]