| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is maf [C]
Identifier: 74318456
GI number: 74318456
Start: 2508808
End: 2509419
Strand: Reverse
Name: maf [C]
Synonym: Tbd_2438
Alternate gene names: 74318456
Gene position: 2509419-2508808 (Counterclockwise)
Preceding gene: 74318457
Following gene: 74318455
Centisome position: 86.24
GC content: 67.97
Gene sequence:
>612_bases ATGCTGGTCGACAAACGCATCTACCTGGCTTCGCAATCGCCGCGACGCCGCGAACTTCTGAAACAGATCGGCATCGCCTA CGACGTGCTGCCCCTGCGTGCCGTTTCCGGGCGGATGGACGTGCTCGAGGTGGCGCACGCCGGTGAGGCCGCGCCCGACT TCGCCCGGCGCATGGCGACCGAGAAAGCGGCCTGCGGCTGGCGTGCGGTCGACCTGCGGCGGCTGTTGCGCTTTCCCGTG CTCGGCGCCGACACGGTCGTCGAACTCGACGGCGACATTCTCGGCAAACCCGCCGACCGCGCGGCCGCAAAGGCCATGCT GGCACGGCTCTCGCGCAGCGAGCATCGGGTGCACACGGCGGTGGCGGTGCAGCACGAGTCGCGGGTCGACGTGCGGCTGT CATCGAGCCGGGTCAAATTCGGCGCGCTCGACGACGCGCTCATCGCGCGCTACCTCGAAACCGGTGAGTATCTTGGCAAG GCCGGCGCCTACGGCATCCAGGGGCGGGCGGGGGCGTTCGTCGAATATCTCGAGGGCAGCTACAGCGGCGTCATGGGTCT GCCGTTATACGAGACTGCCGCCTTACTGAGGGAATTCGGTCTCGCCGTCTGA
Upstream 100 bases:
>100_bases ATGCGCTCGCGCGCGTGATCCTCGCCGAGCAGCTGTACCGTGCCGCATGCATCATCAAGGGGCATCCCTACCATCGGGAT TGAGGGGGAATAACGAAAAA
Downstream 100 bases:
>100_bases GCGCCGCCGCTGCACCATGAGCGAAGAAATCCTCGTCAACGTCACGCCGCAGGAAACGCGCGTCGCCGTGCTCCACCTCG GCGCGGTCCAGGAGCTGCAC
Product: Maf-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MLVDKRIYLASQSPRRRELLKQIGIAYDVLPLRAVSGRMDVLEVAHAGEAAPDFARRMATEKAACGWRAVDLRRLLRFPV LGADTVVELDGDILGKPADRAAAKAMLARLSRSEHRVHTAVAVQHESRVDVRLSSSRVKFGALDDALIARYLETGEYLGK AGAYGIQGRAGAFVEYLEGSYSGVMGLPLYETAALLREFGLAV
Sequences:
>Translated_203_residues MLVDKRIYLASQSPRRRELLKQIGIAYDVLPLRAVSGRMDVLEVAHAGEAAPDFARRMATEKAACGWRAVDLRRLLRFPV LGADTVVELDGDILGKPADRAAAKAMLARLSRSEHRVHTAVAVQHESRVDVRLSSSRVKFGALDDALIARYLETGEYLGK AGAYGIQGRAGAFVEYLEGSYSGVMGLPLYETAALLREFGLAV >Mature_203_residues MLVDKRIYLASQSPRRRELLKQIGIAYDVLPLRAVSGRMDVLEVAHAGEAAPDFARRMATEKAACGWRAVDLRRLLRFPV LGADTVVELDGDILGKPADRAAAKAMLARLSRSEHRVHTAVAVQHESRVDVRLSSSRVKFGALDDALIARYLETGEYLGK AGAYGIQGRAGAFVEYLEGSYSGVMGLPLYETAALLREFGLAV
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family
Homologues:
Organism=Homo sapiens, GI117553627, Length=198, Percent_Identity=38.8888888888889, Blast_Score=115, Evalue=2e-26, Organism=Homo sapiens, GI291045183, Length=196, Percent_Identity=35.2040816326531, Blast_Score=99, Evalue=2e-21, Organism=Homo sapiens, GI310133124, Length=130, Percent_Identity=43.8461538461538, Blast_Score=95, Evalue=4e-20, Organism=Homo sapiens, GI291045181, Length=127, Percent_Identity=43.3070866141732, Blast_Score=94, Evalue=1e-19, Organism=Escherichia coli, GI1789646, Length=196, Percent_Identity=44.8979591836735, Blast_Score=134, Evalue=3e-33, Organism=Escherichia coli, GI87081830, Length=201, Percent_Identity=27.8606965174129, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193202443, Length=192, Percent_Identity=34.375, Blast_Score=99, Evalue=1e-21, Organism=Drosophila melanogaster, GI78706856, Length=209, Percent_Identity=35.4066985645933, Blast_Score=110, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2438_THIDA (Q3SG65)
Other databases:
- EMBL: CP000116 - RefSeq: YP_316196.1 - ProteinModelPortal: Q3SG65 - SMR: Q3SG65 - STRING: Q3SG65 - GeneID: 3673948 - GenomeReviews: CP000116_GR - KEGG: tbd:Tbd_2438 - NMPDR: fig|292415.3.peg.2511 - eggNOG: COG0424 - HOGENOM: HBG414045 - OMA: PNERAED - PhylomeDB: Q3SG65 - ProtClustDB: PRK00032 - BioCyc: TDEN292415:TBD_2438-MONOMER - GO: GO:0005737 - HAMAP: MF_00528 - InterPro: IPR003697 - PIRSF: PIRSF006305 - TIGRFAMs: TIGR00172
Pfam domain/function: PF02545 Maf
EC number: NA
Molecular weight: Translated: 22141; Mature: 22141
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: ACT_SITE 43-43
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVDKRIYLASQSPRRRELLKQIGIAYDVLPLRAVSGRMDVLEVAHAGEAAPDFARRMAT CCCCCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHH EKAACGWRAVDLRRLLRFPVLGADTVVELDGDILGKPADRAAAKAMLARLSRSEHRVHTA HHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VAVQHESRVDVRLSSSRVKFGALDDALIARYLETGEYLGKAGAYGIQGRAGAFVEYLEGS HEEECCCCEEEEECCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC YSGVMGLPLYETAALLREFGLAV CCCEECCCHHHHHHHHHHHCCCC >Mature Secondary Structure MLVDKRIYLASQSPRRRELLKQIGIAYDVLPLRAVSGRMDVLEVAHAGEAAPDFARRMAT CCCCCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHH EKAACGWRAVDLRRLLRFPVLGADTVVELDGDILGKPADRAAAKAMLARLSRSEHRVHTA HHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VAVQHESRVDVRLSSSRVKFGALDDALIARYLETGEYLGKAGAYGIQGRAGAFVEYLEGS HEEECCCCEEEEECCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC YSGVMGLPLYETAALLREFGLAV CCCEECCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA