| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318398
Identifier: 74318398
GI number: 74318398
Start: 2453816
End: 2454538
Strand: Reverse
Name: 74318398
Synonym: Tbd_2380
Alternate gene names: NA
Gene position: 2454538-2453816 (Counterclockwise)
Preceding gene: 74318399
Following gene: 74318397
Centisome position: 84.35
GC content: 66.25
Gene sequence:
>723_bases ATGGCCGCCGCCGCGGCGATTCTGCTCGCGGCCTATTTCATCCGCGGCATCACCGGTTTCGGTTCGGGGTTGATCGCGGT GCCGCTGCTGGCCTTGTTCATGCCGTTGCAGTTCGTCGTCCCCCTCGTGCTCCTGCTCGATTTCACGGCCTCGCTCGTGC TCGGCGGGGTGCACTTCAAACGCGTGCGCTGGGACGAGATCGGTATCCTGATTCCGTTCAGCGTCGTCGGCGTCGCGTTC GGAACGGGTCTGCTGGTGAACCTGCCGCAGGCCCCTATGCTGATCGGGCTGGCATTGTTCGTCCTCGTTTTTGGGCTGCG CAGCCTGCTGAACCTGCACGGCGACAAGCCCGTGTCCCGGCTCTGGGCGATTCCGGCCTCGCTGACGGGCGGCACCGTCG GCGGTCTTTTTGGTACGGGCGGCCCGCCCTATGTGATTTACCTGGCCCATCGCATCCGCGACAAGGGCGAGTCGCGTGCC ACGCTATCGGCGTTGTTCTTCATCGAGGGCTTGACGCGCATCGGCAGCTTCCTGATAGTGGGGCTGCTGTTGACCCCGGC GGTGTGGTCGGCCTATGCCGTCGCACTGCCGCTCGTGCTCGCCGCACTTTATCTCGGCGGACGCGCGCACGTGGGGCTTG CGCCGGCGCAGATGACGCGCCTGGTCGGCCTCCTGCTCCTGGTGTCGAGCATCTCGCTGCTCGTCAAGGCAGCCGCCGCA TGA
Upstream 100 bases:
>100_bases CCTGGGTGAAGGTTTCGGTGACCAAGTTCGCGATTGTCCCCGGCATCAAGGAACTCGGTATCACGATCGAACGCGGCGCG CGTCCTTGAGTTTCGAACAC
Downstream 100 bases:
>100_bases ATGACGCGATGAACGATTCCGCAGCTTTGCACTTCCAGTCGATCGCCTTCACCGGCCTCGCGCCGGGGCCGCGGCTCATC GTGCTCGGCGCCGTGCACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MAAAAAILLAAYFIRGITGFGSGLIAVPLLALFMPLQFVVPLVLLLDFTASLVLGGVHFKRVRWDEIGILIPFSVVGVAF GTGLLVNLPQAPMLIGLALFVLVFGLRSLLNLHGDKPVSRLWAIPASLTGGTVGGLFGTGGPPYVIYLAHRIRDKGESRA TLSALFFIEGLTRIGSFLIVGLLLTPAVWSAYAVALPLVLAALYLGGRAHVGLAPAQMTRLVGLLLLVSSISLLVKAAAA
Sequences:
>Translated_240_residues MAAAAAILLAAYFIRGITGFGSGLIAVPLLALFMPLQFVVPLVLLLDFTASLVLGGVHFKRVRWDEIGILIPFSVVGVAF GTGLLVNLPQAPMLIGLALFVLVFGLRSLLNLHGDKPVSRLWAIPASLTGGTVGGLFGTGGPPYVIYLAHRIRDKGESRA TLSALFFIEGLTRIGSFLIVGLLLTPAVWSAYAVALPLVLAALYLGGRAHVGLAPAQMTRLVGLLLLVSSISLLVKAAAA >Mature_239_residues AAAAAILLAAYFIRGITGFGSGLIAVPLLALFMPLQFVVPLVLLLDFTASLVLGGVHFKRVRWDEIGILIPFSVVGVAFG TGLLVNLPQAPMLIGLALFVLVFGLRSLLNLHGDKPVSRLWAIPASLTGGTVGGLFGTGGPPYVIYLAHRIRDKGESRAT LSALFFIEGLTRIGSFLIVGLLLTPAVWSAYAVALPLVLAALYLGGRAHVGLAPAQMTRLVGLLLLVSSISLLVKAAAA
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25046; Mature: 24914
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAAAAILLAAYFIRGITGFGSGLIAVPLLALFMPLQFVVPLVLLLDFTASLVLGGVHFK CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH RVRWDEIGILIPFSVVGVAFGTGLLVNLPQAPMLIGLALFVLVFGLRSLLNLHGDKPVSR HEEHHHCCEEHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LWAIPASLTGGTVGGLFGTGGPPYVIYLAHRIRDKGESRATLSALFFIEGLTRIGSFLIV HHHCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH GLLLTPAVWSAYAVALPLVLAALYLGGRAHVGLAPAQMTRLVGLLLLVSSISLLVKAAAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AAAAAILLAAYFIRGITGFGSGLIAVPLLALFMPLQFVVPLVLLLDFTASLVLGGVHFK HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH RVRWDEIGILIPFSVVGVAFGTGLLVNLPQAPMLIGLALFVLVFGLRSLLNLHGDKPVSR HEEHHHCCEEHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LWAIPASLTGGTVGGLFGTGGPPYVIYLAHRIRDKGESRATLSALFFIEGLTRIGSFLIV HHHCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH GLLLTPAVWSAYAVALPLVLAALYLGGRAHVGLAPAQMTRLVGLLLLVSSISLLVKAAAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA