Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74318397

Identifier: 74318397

GI number: 74318397

Start: 2452851

End: 2453819

Strand: Reverse

Name: 74318397

Synonym: Tbd_2379

Alternate gene names: NA

Gene position: 2453819-2452851 (Counterclockwise)

Preceding gene: 74318398

Following gene: 74318390

Centisome position: 84.33

GC content: 69.87

Gene sequence:

>969_bases
ATGAATGACGCGATGAACGATTCCGCAGCTTTGCACTTCCAGTCGATCGCCTTCACCGGCCTCGCGCCGGGGCCGCGGCT
CATCGTGCTCGGCGCCGTGCACGGCAACGAGACCTGCGGCACGCAGGCGATCCGTCGCGCGGTCGGCGAAATCGAGTCGG
GTCAGCTCGCCGCGGTCGCAGGCCGGGTCACCTTCGTTCCGGTGGCGAACCCGCTCGCCTACGCCCGCCGCCAGCGCATG
GGCGATCGCAACCTCAACCGTAATCTGGCGCCGAGCGATTCGCCCACCGAATTCGAGGACCACGTGGCCAACTGGCTCTG
CCCGCTGCTGCGGCAGCACGATGCGCTGCTCGACCTGCATTCCTTCCATACCGCCGGGGCACCCTTCGTGATGCTCGGCC
CCGAAGACAACGCGGGCGAACTGGAACCCTTCACGCGCGCGGCCGAGGAGACGGCGCTTGCCCTCGCGCTGGGCGTGCAC
CGCTTCGTCGACGGCTGGCTCGACACCTATGCCGCCGGCGTCGCGCGGCGTCGGGCCGCGGGTGCCCCGGCGCGCGACGC
GGACGTCCACTATGGCGTCGGCACGACCGAGTACATGCGTCGCCACGGCGGCATCGCGCTCACGCTTGAATGCGGTCAGC
ATGACGACCCGGCCGCCCCCGCGGTCGCTTACCGGGCGCTGCGCAACGCCCTCGCACACCTCGGCCTGACTGCCGAGGGC
GCGCCGGAACCCGTCTCGGCACGGGAGGCGCTGCGCCTCTACGAGGTCGTCGACCGCAACCATCCGGACGACCGGTTTGT
ACGTTCCTGGGCGAGTTTCGACCGGCTCGCCGCCGGTGAGTTGATCGGCACGCGTCACGACGGAAAGCCGCTTCGCGCCG
ACCGAGAAGGCTATGTCGTTTTTCCCAATCCGGGCGCCTTGCCCGGACAGGAGTGGTTCTACCTCGCGGAGGCGAGCGGC
CGCGTGTAA

Upstream 100 bases:

>100_bases
GACGCGCGCACGTGGGGCTTGCGCCGGCGCAGATGACGCGCCTGGTCGGCCTCCTGCTCCTGGTGTCGAGCATCTCGCTG
CTCGTCAAGGCAGCCGCCGC

Downstream 100 bases:

>100_bases
CGCTAGCCGCGCGGATGGTGCGCGGCGTGCAGGCGCTTCATCCGCTCGCGCGCGACGTGGGTGTAGATCTGAGTGGTCGA
GATGTCGCTGTGTCCGAGCA

Product: putative succinylglutamate desuccinylase

Products: NA

Alternate protein names: Succinylglutamate Desuccinylase

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MNDAMNDSAALHFQSIAFTGLAPGPRLIVLGAVHGNETCGTQAIRRAVGEIESGQLAAVAGRVTFVPVANPLAYARRQRM
GDRNLNRNLAPSDSPTEFEDHVANWLCPLLRQHDALLDLHSFHTAGAPFVMLGPEDNAGELEPFTRAAEETALALALGVH
RFVDGWLDTYAAGVARRRAAGAPARDADVHYGVGTTEYMRRHGGIALTLECGQHDDPAAPAVAYRALRNALAHLGLTAEG
APEPVSAREALRLYEVVDRNHPDDRFVRSWASFDRLAAGELIGTRHDGKPLRADREGYVVFPNPGALPGQEWFYLAEASG
RV

Sequences:

>Translated_322_residues
MNDAMNDSAALHFQSIAFTGLAPGPRLIVLGAVHGNETCGTQAIRRAVGEIESGQLAAVAGRVTFVPVANPLAYARRQRM
GDRNLNRNLAPSDSPTEFEDHVANWLCPLLRQHDALLDLHSFHTAGAPFVMLGPEDNAGELEPFTRAAEETALALALGVH
RFVDGWLDTYAAGVARRRAAGAPARDADVHYGVGTTEYMRRHGGIALTLECGQHDDPAAPAVAYRALRNALAHLGLTAEG
APEPVSAREALRLYEVVDRNHPDDRFVRSWASFDRLAAGELIGTRHDGKPLRADREGYVVFPNPGALPGQEWFYLAEASG
RV
>Mature_322_residues
MNDAMNDSAALHFQSIAFTGLAPGPRLIVLGAVHGNETCGTQAIRRAVGEIESGQLAAVAGRVTFVPVANPLAYARRQRM
GDRNLNRNLAPSDSPTEFEDHVANWLCPLLRQHDALLDLHSFHTAGAPFVMLGPEDNAGELEPFTRAAEETALALALGVH
RFVDGWLDTYAAGVARRRAAGAPARDADVHYGVGTTEYMRRHGGIALTLECGQHDDPAAPAVAYRALRNALAHLGLTAEG
APEPVSAREALRLYEVVDRNHPDDRFVRSWASFDRLAAGELIGTRHDGKPLRADREGYVVFPNPGALPGQEWFYLAEASG
RV

Specific function: Unknown

COG id: COG3608

COG function: function code R; Predicted deacylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34777; Mature: 34777

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDAMNDSAALHFQSIAFTGLAPGPRLIVLGAVHGNETCGTQAIRRAVGEIESGQLAAVA
CCCCCCCCHHEEEHHHEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEE
GRVTFVPVANPLAYARRQRMGDRNLNRNLAPSDSPTEFEDHVANWLCPLLRQHDALLDLH
CCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SFHTAGAPFVMLGPEDNAGELEPFTRAAEETALALALGVHRFVDGWLDTYAAGVARRRAA
HHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GAPARDADVHYGVGTTEYMRRHGGIALTLECGQHDDPAAPAVAYRALRNALAHLGLTAEG
CCCCCCCCEEECCCHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
APEPVSAREALRLYEVVDRNHPDDRFVRSWASFDRLAAGELIGTRHDGKPLRADREGYVV
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE
FPNPGALPGQEWFYLAEASGRV
ECCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MNDAMNDSAALHFQSIAFTGLAPGPRLIVLGAVHGNETCGTQAIRRAVGEIESGQLAAVA
CCCCCCCCHHEEEHHHEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEE
GRVTFVPVANPLAYARRQRMGDRNLNRNLAPSDSPTEFEDHVANWLCPLLRQHDALLDLH
CCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SFHTAGAPFVMLGPEDNAGELEPFTRAAEETALALALGVHRFVDGWLDTYAAGVARRRAA
HHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GAPARDADVHYGVGTTEYMRRHGGIALTLECGQHDDPAAPAVAYRALRNALAHLGLTAEG
CCCCCCCCEEECCCHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
APEPVSAREALRLYEVVDRNHPDDRFVRSWASFDRLAAGELIGTRHDGKPLRADREGYVV
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE
FPNPGALPGQEWFYLAEASGRV
ECCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA