| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is envZ [H]
Identifier: 74318371
GI number: 74318371
Start: 2427465
End: 2428751
Strand: Reverse
Name: envZ [H]
Synonym: Tbd_2353
Alternate gene names: 74318371
Gene position: 2428751-2427465 (Counterclockwise)
Preceding gene: 74318372
Following gene: 74318369
Centisome position: 83.47
GC content: 71.17
Gene sequence:
>1287_bases ATGGTACGCATCGCCAGTTCGCTCTACGCGCGCACGGCGCTGACGCTGGCCATCGCTTTCGTCCTCTTTCAGGCCGCCGC CTTCGCGGTCGTATACCGCACCCTGATCATCCCGCTGGCCGAGCGCTCGGCCGACGACCTCGCGGGCCTGATCGTGCTGT CGGCTCAGACCTGGGTCGAACTGCCGCCGCAAACCCGCGCCGCGTTCGAGCGGGAACTGGCGGACCGGCACGGTCTGCGT CTCACGGCCGGCGATCCCGGCGCGGTCGCCGACGCGCCGCAGTTCGCGTTCCGTGCGCAGATCGAGACCGCCCTCAGCCG CCGCGTGGGCGAGCCGGTCAAGCTTCGGGGGGTGCCCGGGACACGCGCGGCCTGGCTCGACATCCCGACCGGCGGCCATG CCCTGCAGGTCGGCTTCTACCCGGCGCGCTACGCGGTGAAGCCGCCGCTGGCGGCGATCGCTGTGATCGCGCTCGGCGCC CTGCTCAGTCTGGTGACCGCGCTGCTGCTCGTGCGCCGCATCACGCTTCCGCTCGCGCGGGCGGCGCGGGCCGCACGGCA GGTCGGCGCGGGCCAGCTCCCCGAGCCGCTGCCGGAGACCGGCCCGGCCGAGGTCGCCGAACTCGCGCGTCGCTTCAACA CCATGGCGACCGAGGTCCGCGAGCTGCTCGACAACCGCACGACCCTGCTCGCCGGAATCTCGCACGACCTGCGCACGCCG ATGACCCGGCTCCAGCTCCATCTCGAAATGCTGCGCGACGCGCCGAGCCCGGCACGAATCGATCGCGCCGTCGCCGACCT CGCCGACATGAACAAGCTCATCACAGGCTATCTCGAACTCGCGCGCACGACCCAGGCCGAGGCGAAGACGCGCTTCGACC TCGCGGTCCTGCTCGAGGAAGTCGCGACCGACGCGGGCCTGGCGGGATTTTCCGCGGCGCCGTGCACGGTCGAGGCGGGC CGCCTGGCACTGCGCCAGATCGTGTCGAACCTGATCCAGAATGCGCAGCGCTACGGGGACGCAGCGACGGTCGAACTCGA ACTCGAATGCTCGGAGCTGGGGGCGCGGGTGACCGTGCGCGATGCGGGACCGGGGATTCCGGAAGATCAGCTGGAGAAGG TGTTCCGGCCGTTCTACCGGCTCGAGGCATCGCGCTCGGAAGCGACCGGCGGAAGCGGTCTCGGGCTTGCGATCGTCCGG CAGTTGGCGGCGACCCACGGTTGGAAAGTCTCGCTGGCCAACCGCAAGACCGGCGGGCTCGAGGCGGTGCTCGAAATCCG CCGCTAG
Upstream 100 bases:
>100_bases CAAGAAAATCGAGGACGACCCGACGAACCCCGCCTACATCCGCACCCAGCGCGGGCAGGGTTATCTGTTCGTGCCCCAGG GCAAGGGCTGACGCCCGGCG
Downstream 100 bases:
>100_bases CCCGAACGGGAAGTCAGGAAGGGCAGTGCCTGCTGCTGCGGCGCAGAATCCGCAGTTCGATGAATAACAGGGTCAGACTG AACATCGACATGCGGCAGGT
Product: periplasmic sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MVRIASSLYARTALTLAIAFVLFQAAAFAVVYRTLIIPLAERSADDLAGLIVLSAQTWVELPPQTRAAFERELADRHGLR LTAGDPGAVADAPQFAFRAQIETALSRRVGEPVKLRGVPGTRAAWLDIPTGGHALQVGFYPARYAVKPPLAAIAVIALGA LLSLVTALLLVRRITLPLARAARAARQVGAGQLPEPLPETGPAEVAELARRFNTMATEVRELLDNRTTLLAGISHDLRTP MTRLQLHLEMLRDAPSPARIDRAVADLADMNKLITGYLELARTTQAEAKTRFDLAVLLEEVATDAGLAGFSAAPCTVEAG RLALRQIVSNLIQNAQRYGDAATVELELECSELGARVTVRDAGPGIPEDQLEKVFRPFYRLEASRSEATGGSGLGLAIVR QLAATHGWKVSLANRKTGGLEAVLEIRR
Sequences:
>Translated_428_residues MVRIASSLYARTALTLAIAFVLFQAAAFAVVYRTLIIPLAERSADDLAGLIVLSAQTWVELPPQTRAAFERELADRHGLR LTAGDPGAVADAPQFAFRAQIETALSRRVGEPVKLRGVPGTRAAWLDIPTGGHALQVGFYPARYAVKPPLAAIAVIALGA LLSLVTALLLVRRITLPLARAARAARQVGAGQLPEPLPETGPAEVAELARRFNTMATEVRELLDNRTTLLAGISHDLRTP MTRLQLHLEMLRDAPSPARIDRAVADLADMNKLITGYLELARTTQAEAKTRFDLAVLLEEVATDAGLAGFSAAPCTVEAG RLALRQIVSNLIQNAQRYGDAATVELELECSELGARVTVRDAGPGIPEDQLEKVFRPFYRLEASRSEATGGSGLGLAIVR QLAATHGWKVSLANRKTGGLEAVLEIRR >Mature_428_residues MVRIASSLYARTALTLAIAFVLFQAAAFAVVYRTLIIPLAERSADDLAGLIVLSAQTWVELPPQTRAAFERELADRHGLR LTAGDPGAVADAPQFAFRAQIETALSRRVGEPVKLRGVPGTRAAWLDIPTGGHALQVGFYPARYAVKPPLAAIAVIALGA LLSLVTALLLVRRITLPLARAARAARQVGAGQLPEPLPETGPAEVAELARRFNTMATEVRELLDNRTTLLAGISHDLRTP MTRLQLHLEMLRDAPSPARIDRAVADLADMNKLITGYLELARTTQAEAKTRFDLAVLLEEVATDAGLAGFSAAPCTVEAG RLALRQIVSNLIQNAQRYGDAATVELELECSELGARVTVRDAGPGIPEDQLEKVFRPFYRLEASRSEATGGSGLGLAIVR QLAATHGWKVSLANRKTGGLEAVLEIRR
Specific function: Member of the two-component regulatory system envZ/ompR involved in the regulation of osmoregulation (genes ompF and ompC). EnvZ functions as a membrane-associated protein kinase that phosphorylates ompR in response to environmental signals [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1789808, Length=444, Percent_Identity=29.954954954955, Blast_Score=149, Evalue=4e-37, Organism=Escherichia coli, GI1790346, Length=263, Percent_Identity=31.9391634980989, Blast_Score=119, Evalue=5e-28, Organism=Escherichia coli, GI1788393, Length=266, Percent_Identity=30.8270676691729, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1787894, Length=304, Percent_Identity=31.9078947368421, Blast_Score=115, Evalue=5e-27, Organism=Escherichia coli, GI1790551, Length=285, Percent_Identity=29.8245614035088, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI1786783, Length=280, Percent_Identity=27.8571428571429, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1786600, Length=208, Percent_Identity=29.3269230769231, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1790861, Length=282, Percent_Identity=28.7234042553192, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI87082128, Length=263, Percent_Identity=29.277566539924, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1789149, Length=219, Percent_Identity=30.1369863013699, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI145693157, Length=230, Percent_Identity=23.9130434782609, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI1786912, Length=222, Percent_Identity=27.9279279279279, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI48994928, Length=226, Percent_Identity=28.7610619469027, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI1789403, Length=334, Percent_Identity=27.8443113772455, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1790436, Length=207, Percent_Identity=28.5024154589372, Blast_Score=68, Evalue=9e-13, Organism=Escherichia coli, GI1788279, Length=282, Percent_Identity=24.822695035461, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1788549, Length=202, Percent_Identity=24.7524752475248, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 45955; Mature: 45955
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRIASSLYARTALTLAIAFVLFQAAAFAVVYRTLIIPLAERSADDLAGLIVLSAQTWVE CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEECHHHHC LPPQTRAAFERELADRHGLRLTAGDPGAVADAPQFAFRAQIETALSRRVGEPVKLRGVPG CCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCC TRAAWLDIPTGGHALQVGFYPARYAVKPPLAAIAVIALGALLSLVTALLLVRRITLPLAR CCEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARAARQVGAGQLPEPLPETGPAEVAELARRFNTMATEVRELLDNRTTLLAGISHDLRTP HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHH MTRLQLHLEMLRDAPSPARIDRAVADLADMNKLITGYLELARTTQAEAKTRFDLAVLLEE HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VATDAGLAGFSAAPCTVEAGRLALRQIVSNLIQNAQRYGDAATVELELECSELGARVTVR HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHCCEEEEE DAGPGIPEDQLEKVFRPFYRLEASRSEATGGSGLGLAIVRQLAATHGWKVSLANRKTGGL CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCH EAVLEIRR HHHHHHCC >Mature Secondary Structure MVRIASSLYARTALTLAIAFVLFQAAAFAVVYRTLIIPLAERSADDLAGLIVLSAQTWVE CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEECHHHHC LPPQTRAAFERELADRHGLRLTAGDPGAVADAPQFAFRAQIETALSRRVGEPVKLRGVPG CCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCC TRAAWLDIPTGGHALQVGFYPARYAVKPPLAAIAVIALGALLSLVTALLLVRRITLPLAR CCEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARAARQVGAGQLPEPLPETGPAEVAELARRFNTMATEVRELLDNRTTLLAGISHDLRTP HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHH MTRLQLHLEMLRDAPSPARIDRAVADLADMNKLITGYLELARTTQAEAKTRFDLAVLLEE HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VATDAGLAGFSAAPCTVEAGRLALRQIVSNLIQNAQRYGDAATVELELECSELGARVTVR HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHCCEEEEE DAGPGIPEDQLEKVFRPFYRLEASRSEATGGSGLGLAIVRQLAATHGWKVSLANRKTGGL CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCH EAVLEIRR HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 6292200; 2997120; 9278503; 8132603; 2277041; 2824492; 1323560; 9817206; 10426948 [H]