Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74318368

Identifier: 74318368

GI number: 74318368

Start: 2423985

End: 2424827

Strand: Reverse

Name: 74318368

Synonym: Tbd_2350

Alternate gene names: NA

Gene position: 2424827-2423985 (Counterclockwise)

Preceding gene: 74318369

Following gene: 74318367

Centisome position: 83.33

GC content: 67.26

Gene sequence:

>843_bases
ATGCCGACATCCGAGCAGGCGGACGGTGCCGATACCATCGTGTATCGCCGCCATGCCTGGCCGATCCGCCTCATGCACTG
GATCAACGTGGTCGCCTTTGCGGTGCTGCTCATGAGCGGGCTGCAGATCTTCAACGCGTTTCCGGCGCTTCACTGGGGCA
AATCCTCCTACACCGGCGAGGCCCCGTTGCTGCGCATCGGCGCGCGTCTCGACGCCGACGGTAAGGCGGTCGGGGTGACG
CGCATTTTCGGGCGCGATTTCGAGACGACCGGTGTGCTCGGGGTGTCGGCGGGCGCCGACGGGGCGCCGACGGTGCGCGG
TTTTCCGGCATGGATCACGCTGCCGGGCGAGCAGTGGCTCGCGATGGCGCGGCGCTGGCATCTGTTCTTCGCCTGGGTGC
TCGTCGTCAACGGCCTCCTGTATCTCGGCTACACGCTCGCCAGCGGGCACCTCGCGCGCGATCTCCTGCCGGATCGCGCC
GACTGGCGCGGGTTCGGGCAGTCGCTCAAGGACCACCTGCTTTTCCGCCGCCCGGCGGGAGAGGCCGAGCGCCGTTACAA
CGTGCTGCAAAAACTCGCCTACCTGGCCGTGATCTTCGTGCTGTTTCCGCTCGTGGTCGTGATGGGCCTGGCCATGTCGC
CGGCGCTGAACGCGCTCCTGCCCGGTTGGGTCGACGTCGTGGGCGGACGCCAGTCGGCGCGTACCCTGCACTTCGTGCTG
GCCTGGATGCTCGTGGCCTTCGTCTTCATCCACGTCTTCGAGCTCGTCGTCAGCGGCTTCTGGAACAAGCTGCGCGCCAT
GGTGACCGGGCGTTATCGACTCGAAGGGGATCGCGATGCGTGA

Upstream 100 bases:

>100_bases
CACGAGGCGAGCGCCTGAGCCGCCGCGGTCGCTTGGATTCCGCGCGCCGCCCGCCTATGCTGCACAGGCCAAAGGCGCAG
CGAATTGCCGAGGGATTTCA

Downstream 100 bases:

>100_bases
ATGCGAAAACGGCCGCCGGCGCTTCCTGCAGCGCGCGCTCGCCGCCGGAAGCGCGCTCGTGCTCGCCGGCTGCGAGCGCC
TGTCGCGCAGCGAATGGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane B-Type Cytochrome Protein; Thiosulfate Reductase Cytochrome B Subunit-Like Protein; HupC/HyaC/HydC Family Protein; Cytochrome B/B6 Domain Protein; Transmembrane Cytochrome B-Type Protein

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MPTSEQADGADTIVYRRHAWPIRLMHWINVVAFAVLLMSGLQIFNAFPALHWGKSSYTGEAPLLRIGARLDADGKAVGVT
RIFGRDFETTGVLGVSAGADGAPTVRGFPAWITLPGEQWLAMARRWHLFFAWVLVVNGLLYLGYTLASGHLARDLLPDRA
DWRGFGQSLKDHLLFRRPAGEAERRYNVLQKLAYLAVIFVLFPLVVVMGLAMSPALNALLPGWVDVVGGRQSARTLHFVL
AWMLVAFVFIHVFELVVSGFWNKLRAMVTGRYRLEGDRDA

Sequences:

>Translated_280_residues
MPTSEQADGADTIVYRRHAWPIRLMHWINVVAFAVLLMSGLQIFNAFPALHWGKSSYTGEAPLLRIGARLDADGKAVGVT
RIFGRDFETTGVLGVSAGADGAPTVRGFPAWITLPGEQWLAMARRWHLFFAWVLVVNGLLYLGYTLASGHLARDLLPDRA
DWRGFGQSLKDHLLFRRPAGEAERRYNVLQKLAYLAVIFVLFPLVVVMGLAMSPALNALLPGWVDVVGGRQSARTLHFVL
AWMLVAFVFIHVFELVVSGFWNKLRAMVTGRYRLEGDRDA
>Mature_279_residues
PTSEQADGADTIVYRRHAWPIRLMHWINVVAFAVLLMSGLQIFNAFPALHWGKSSYTGEAPLLRIGARLDADGKAVGVTR
IFGRDFETTGVLGVSAGADGAPTVRGFPAWITLPGEQWLAMARRWHLFFAWVLVVNGLLYLGYTLASGHLARDLLPDRAD
WRGFGQSLKDHLLFRRPAGEAERRYNVLQKLAYLAVIFVLFPLVVVMGLAMSPALNALLPGWVDVVGGRQSARTLHFVLA
WMLVAFVFIHVFELVVSGFWNKLRAMVTGRYRLEGDRDA

Specific function: Unknown

COG id: COG4117

COG function: function code C; Thiosulfate reductase cytochrome B subunit (membrane anchoring protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31202; Mature: 31071

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTSEQADGADTIVYRRHAWPIRLMHWINVVAFAVLLMSGLQIFNAFPALHWGKSSYTGE
CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCC
APLLRIGARLDADGKAVGVTRIFGRDFETTGVLGVSAGADGAPTVRGFPAWITLPGEQWL
CCHHHCCCCCCCCCCEEEHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCHHHH
AMARRWHLFFAWVLVVNGLLYLGYTLASGHLARDLLPDRADWRGFGQSLKDHLLFRRPAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC
EAERRYNVLQKLAYLAVIFVLFPLVVVMGLAMSPALNALLPGWVDVVGGRQSARTLHFVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHH
AWMLVAFVFIHVFELVVSGFWNKLRAMVTGRYRLEGDRDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCC
>Mature Secondary Structure 
PTSEQADGADTIVYRRHAWPIRLMHWINVVAFAVLLMSGLQIFNAFPALHWGKSSYTGE
CCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCC
APLLRIGARLDADGKAVGVTRIFGRDFETTGVLGVSAGADGAPTVRGFPAWITLPGEQWL
CCHHHCCCCCCCCCCEEEHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCHHHH
AMARRWHLFFAWVLVVNGLLYLGYTLASGHLARDLLPDRADWRGFGQSLKDHLLFRRPAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC
EAERRYNVLQKLAYLAVIFVLFPLVVVMGLAMSPALNALLPGWVDVVGGRQSARTLHFVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHH
AWMLVAFVFIHVFELVVSGFWNKLRAMVTGRYRLEGDRDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA