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The map label for this gene is yedY [H]

Identifier: 74318367

GI number: 74318367

Start: 2423222

End: 2423992

Strand: Reverse

Name: yedY [H]

Synonym: Tbd_2349

Alternate gene names: 74318367

Gene position: 2423992-2423222 (Counterclockwise)

Preceding gene: 74318368

Following gene: 74318366

Centisome position: 83.3

GC content: 67.19

Gene sequence:

>771_bases
ATGCGTGAATGCGAAAACGGCCGCCGGCGCTTCCTGCAGCGCGCGCTCGCCGCCGGAAGCGCGCTCGTGCTCGCCGGCTG
CGAGCGCCTGTCGCGCAGCGAATGGTTCACCGGGGTGCTCGGCAGCGCCGAGAAGCTGAACTTCGGGGTGCAGCGCCTGT
TGCTTCCGCGCAAGGCGATGGCGCAGGAATTCACTGAGGCCGACCTGTCGCCCGATTTCCGCAGTAACGGCACCCGCGAC
CCCGACGACCCCGCCTATCAGGCGCTCGCCGCCGATCGCTTCGTCGACTACCGGCTGCGGGTCGGGGGCCTGGTCGCGCA
ACCCCGCGCGTATTCGCTCGACGCGTTGAAAGCCCTGCCGAGCCGCACCCAGATCACGCGTCACGACTGCGTCGAAGGCT
GGAGCGCGATCGGCAAGTGGAAAGGCGTCCCGCTCGCCCGCATCCTCGAAGCCGTTACGCCGCTCCCCTCGGCCCGCTAC
GTCGTGTTCTACTGCGCCGACTCGATGGAGGCGTCGGGAACGCGCTACTACGAAAGCATCGACATGGAGGACGCCTGGCA
CGTGCAGACGCTCCTCGCCTACGAGCTGAACGACGCACCTCTGCCGATCAAGAACGGCGCGCCGATTCGCCTGCGCGTCG
AGCGTCAGCTCGGCTACAAGATGGCGAAATACGTCATGCGGATAGAACTGGTCGATCGCCTCGACACGATCGCAGGCGGC
AAGGGCGGCTACTGGGAAGACCGCGGCTACGAATGGTACGCGGGCATCTGA

Upstream 100 bases:

>100_bases
GCCTTCGTCTTCATCCACGTCTTCGAGCTCGTCGTCAGCGGCTTCTGGAACAAGCTGCGCGCCATGGTGACCGGGCGTTA
TCGACTCGAAGGGGATCGCG

Downstream 100 bases:

>100_bases
GTCCGGCTCGGCGTCGGGGATCCGGGCGCGTGCGTTCGCCGGTCCAAACTTTGCGCCGCCCTTAGAAACGCCCGTCAGGC
ACGGTAAAATGCGGCTTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MRECENGRRRFLQRALAAGSALVLAGCERLSRSEWFTGVLGSAEKLNFGVQRLLLPRKAMAQEFTEADLSPDFRSNGTRD
PDDPAYQALAADRFVDYRLRVGGLVAQPRAYSLDALKALPSRTQITRHDCVEGWSAIGKWKGVPLARILEAVTPLPSARY
VVFYCADSMEASGTRYYESIDMEDAWHVQTLLAYELNDAPLPIKNGAPIRLRVERQLGYKMAKYVMRIELVDRLDTIAGG
KGGYWEDRGYEWYAGI

Sequences:

>Translated_256_residues
MRECENGRRRFLQRALAAGSALVLAGCERLSRSEWFTGVLGSAEKLNFGVQRLLLPRKAMAQEFTEADLSPDFRSNGTRD
PDDPAYQALAADRFVDYRLRVGGLVAQPRAYSLDALKALPSRTQITRHDCVEGWSAIGKWKGVPLARILEAVTPLPSARY
VVFYCADSMEASGTRYYESIDMEDAWHVQTLLAYELNDAPLPIKNGAPIRLRVERQLGYKMAKYVMRIELVDRLDTIAGG
KGGYWEDRGYEWYAGI
>Mature_256_residues
MRECENGRRRFLQRALAAGSALVLAGCERLSRSEWFTGVLGSAEKLNFGVQRLLLPRKAMAQEFTEADLSPDFRSNGTRD
PDDPAYQALAADRFVDYRLRVGGLVAQPRAYSLDALKALPSRTQITRHDCVEGWSAIGKWKGVPLARILEAVTPLPSARY
VVFYCADSMEASGTRYYESIDMEDAWHVQTLLAYELNDAPLPIKNGAPIRLRVERQLGYKMAKYVMRIELVDRLDTIAGG
KGGYWEDRGYEWYAGI

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=165, Percent_Identity=32.1212121212121, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 28819; Mature: 28819

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRECENGRRRFLQRALAAGSALVLAGCERLSRSEWFTGVLGSAEKLNFGVQRLLLPRKAM
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHH
AQEFTEADLSPDFRSNGTRDPDDPAYQALAADRFVDYRLRVGGLVAQPRAYSLDALKALP
HHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHCC
SRTQITRHDCVEGWSAIGKWKGVPLARILEAVTPLPSARYVVFYCADSMEASGTRYYESI
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHEECC
DMEDAWHVQTLLAYELNDAPLPIKNGAPIRLRVERQLGYKMAKYVMRIELVDRLDTIAGG
CCCCHHHHHHHHHEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCC
KGGYWEDRGYEWYAGI
CCCCCCCCCEEEECCC
>Mature Secondary Structure
MRECENGRRRFLQRALAAGSALVLAGCERLSRSEWFTGVLGSAEKLNFGVQRLLLPRKAM
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHH
AQEFTEADLSPDFRSNGTRDPDDPAYQALAADRFVDYRLRVGGLVAQPRAYSLDALKALP
HHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHCC
SRTQITRHDCVEGWSAIGKWKGVPLARILEAVTPLPSARYVVFYCADSMEASGTRYYESI
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHEECC
DMEDAWHVQTLLAYELNDAPLPIKNGAPIRLRVERQLGYKMAKYVMRIELVDRLDTIAGG
CCCCHHHHHHHHHEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCC
KGGYWEDRGYEWYAGI
CCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]