| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is gufA [H]
Identifier: 74318342
GI number: 74318342
Start: 2398818
End: 2399735
Strand: Direct
Name: gufA [H]
Synonym: Tbd_2324
Alternate gene names: 74318342
Gene position: 2398818-2399735 (Clockwise)
Preceding gene: 74318336
Following gene: 74318346
Centisome position: 82.44
GC content: 72.0
Gene sequence:
>918_bases ATGAACACCCGGGCCCGCAGCGTGCAGCGTTTCCTGACCGACCCGGGTCGCACTGCCGCCGTGCGGCGCCTGGGGACGGC GCTCGCGCTCGCGCTGCTCGGCGGCCTGGTCTGGGTCGCCTGGGTTCACGGCCGCGGGGGGCTCGGTACGCCGATGGGCC TGGCCCTGGCCGGCTCAGGCGTCGCCGCGCTCGCCACCGCCGTGGGTGCGCTGCCCGCGCTCTTCATTCGCCGGATCTCG CCGCGCTGGGAAGACGTCATGCTGGGTTTTGGCGCCGGGGTCATGATCGCCGCCGCCTGCTTCTCGCTGATCGTGCCGGG AGTCGCGGCGGGTACCGAGACGACCGGGAGTCGCGCCGGCGGCGCTACGCTGGTCGCCGCGGGGCTCGTCCTCGGCGCCC TATTCCTGCTGCTCGCCGACCGGGTCGTGCCGCACGAACACCCGCAAGCAGGCCGCCACGGGCCAGAGTGGGTGCATCTG CGCCGGGTGTGGCTGATGGTCTTCGCCATCGCGCTGCATAATTTTCCGGAGGGAATGGCGATCGGGGTCGGCTTCTCGGG CGGAGACCCGGCGGTCGGCGTGCCCTTGACCGCGGCGATCGCGATCCAGGACATCCCCGAGGGACTGGTCGTCGCCGTGG CCTTGCGCACGGTCGCCTATCTGCCCTGGCGGGCGACGCTCGCGGCGGCGCTCACCGGGCTCGCCGAGCCGCTCGGCGCG ATCGTCGGGGTCGCGCTGACGAGCGGGTTCGCGCCGCTTTATCCCTTGGGCCTGGGCTTTGCGGCCGGCGCGATGATCTG GGTCGTGTCGCACGAGATCGTGCCCGAGACCCATCGCAAGGGGCACGAGCAGGCCGCGACGCTCGGCCTCATCGGCGGTT TTGTGTTGATGATGATGCTGGACACAGCGCTTGGTTAG
Upstream 100 bases:
>100_bases GAGCGTCATGCGGACGGTCGGTTAAGGCGATCGGCCTATTCTAGCCCTCCCCGCCGGTTCCCCCTGCGCGTGCCAGGGCG CGCTCGGCTAAATTGAAGCC
Downstream 100 bases:
>100_bases ACGCGCGCACCGCCGCGCCCGGCGCGGACTCGGTGGCCTGCGCCTGCGAGGGCGTTCCGGCTTCCTGCTGATGTTGATGA CCCAGGGCGAGCGCGTAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MNTRARSVQRFLTDPGRTAAVRRLGTALALALLGGLVWVAWVHGRGGLGTPMGLALAGSGVAALATAVGALPALFIRRIS PRWEDVMLGFGAGVMIAAACFSLIVPGVAAGTETTGSRAGGATLVAAGLVLGALFLLLADRVVPHEHPQAGRHGPEWVHL RRVWLMVFAIALHNFPEGMAIGVGFSGGDPAVGVPLTAAIAIQDIPEGLVVAVALRTVAYLPWRATLAAALTGLAEPLGA IVGVALTSGFAPLYPLGLGFAAGAMIWVVSHEIVPETHRKGHEQAATLGLIGGFVLMMMLDTALG
Sequences:
>Translated_305_residues MNTRARSVQRFLTDPGRTAAVRRLGTALALALLGGLVWVAWVHGRGGLGTPMGLALAGSGVAALATAVGALPALFIRRIS PRWEDVMLGFGAGVMIAAACFSLIVPGVAAGTETTGSRAGGATLVAAGLVLGALFLLLADRVVPHEHPQAGRHGPEWVHL RRVWLMVFAIALHNFPEGMAIGVGFSGGDPAVGVPLTAAIAIQDIPEGLVVAVALRTVAYLPWRATLAAALTGLAEPLGA IVGVALTSGFAPLYPLGLGFAAGAMIWVVSHEIVPETHRKGHEQAATLGLIGGFVLMMMLDTALG >Mature_305_residues MNTRARSVQRFLTDPGRTAAVRRLGTALALALLGGLVWVAWVHGRGGLGTPMGLALAGSGVAALATAVGALPALFIRRIS PRWEDVMLGFGAGVMIAAACFSLIVPGVAAGTETTGSRAGGATLVAAGLVLGALFLLLADRVVPHEHPQAGRHGPEWVHL RRVWLMVFAIALHNFPEGMAIGVGFSGGDPAVGVPLTAAIAIQDIPEGLVVAVALRTVAYLPWRATLAAALTGLAEPLGA IVGVALTSGFAPLYPLGLGFAAGAMIWVVSHEIVPETHRKGHEQAATLGLIGGFVLMMMLDTALG
Specific function: Mediates Zinc Uptake. May Also Transport Other Divalent Cations Such As Copper And Cadmium Ions. [C]
COG id: COG0428
COG function: function code P; Predicted divalent heavy-metal cations transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI229577422, Length=169, Percent_Identity=39.0532544378698, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI229577418, Length=169, Percent_Identity=39.0532544378698, Blast_Score=110, Evalue=1e-24, Organism=Escherichia coli, GI1789419, Length=245, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17507805, Length=302, Percent_Identity=31.1258278145695, Blast_Score=124, Evalue=8e-29, Organism=Drosophila melanogaster, GI24652846, Length=169, Percent_Identity=39.6449704142012, Blast_Score=106, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003689 [H]
Pfam domain/function: PF02535 Zip [H]
EC number: NA
Molecular weight: Translated: 31192; Mature: 31192
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTRARSVQRFLTDPGRTAAVRRLGTALALALLGGLVWVAWVHGRGGLGTPMGLALAGSG CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCC VAALATAVGALPALFIRRISPRWEDVMLGFGAGVMIAAACFSLIVPGVAAGTETTGSRAG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GATLVAAGLVLGALFLLLADRVVPHEHPQAGRHGPEWVHLRRVWLMVFAIALHNFPEGMA CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCE IGVGFSGGDPAVGVPLTAAIAIQDIPEGLVVAVALRTVAYLPWRATLAAALTGLAEPLGA EEEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH IVGVALTSGFAPLYPLGLGFAAGAMIWVVSHEIVPETHRKGHEQAATLGLIGGFVLMMML HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHH DTALG HHHCC >Mature Secondary Structure MNTRARSVQRFLTDPGRTAAVRRLGTALALALLGGLVWVAWVHGRGGLGTPMGLALAGSG CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCC VAALATAVGALPALFIRRISPRWEDVMLGFGAGVMIAAACFSLIVPGVAAGTETTGSRAG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GATLVAAGLVLGALFLLLADRVVPHEHPQAGRHGPEWVHLRRVWLMVFAIALHNFPEGMA CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCE IGVGFSGGDPAVGVPLTAAIAIQDIPEGLVVAVALRTVAYLPWRATLAAALTGLAEPLGA EEEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH IVGVALTSGFAPLYPLGLGFAAGAMIWVVSHEIVPETHRKGHEQAATLGLIGGFVLMMML HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHH DTALG HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7934835 [H]