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The map label for this gene is yqaA [H]

Identifier: 74318336

GI number: 74318336

Start: 2391385

End: 2391795

Strand: Direct

Name: yqaA [H]

Synonym: Tbd_2318

Alternate gene names: 74318336

Gene position: 2391385-2391795 (Clockwise)

Preceding gene: 74318331

Following gene: 74318342

Centisome position: 82.18

GC content: 71.78

Gene sequence:

>411_bases
ATGATCGACTGGACCTTGTTCGGCTCGGCCCTGTTGTCGTCGACGCTCTTTCCGGGCGGCTCGGAAGCCTTGCTGCTCTA
TCGCCTGCACGGCGGCGCGGACCCGCTCGCGAGCGTCGCAACTGCGACGGCGGGCAACGTGCTCGGCAGTGTCGTGACCT
ATGCGATGGGGCGTTTCGGGCGCGCCGCACTGGTCCGCCCCGCTGCCGCAGCCGAGCGGCGCATGGCGCGCGCCGAACGT
TGGTTCGGGCGCTTCGGGCGCCCGGTGCTGCTGCTGGCCTGGCTGCCGGTCGTCGGCGACGCGCTCTGTCTTCTCGCCGG
CGCGTTGCGCGTCGGCCTCGCGAGCTTTGTCGTGCTGGTGACGCTCGGCAAGCTCGCGCGCTACGCCGCGCTCGCCTGGA
CGGTGGTGTGA

Upstream 100 bases:

>100_bases
TATTGATATCAATGATTGATGTTTTCAATCGGCCGTTCTCGGCCTGCAGGTCCTGCCGGGTCTGGCGGTCGGCCGATCGC
AGGGCCGACGCGCCTCGGCG

Downstream 100 bases:

>100_bases
TCAGGCGTGGCGCGCGCGCCAGCGCGTCAGCGCGGCGCCGGCGCTGGCCATGCTGACGTAGAAGGTCGGCGTGATGTAGA
GCGTGAGGAACTGCGAGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MIDWTLFGSALLSSTLFPGGSEALLLYRLHGGADPLASVATATAGNVLGSVVTYAMGRFGRAALVRPAAAAERRMARAER
WFGRFGRPVLLLAWLPVVGDALCLLAGALRVGLASFVVLVTLGKLARYAALAWTVV

Sequences:

>Translated_136_residues
MIDWTLFGSALLSSTLFPGGSEALLLYRLHGGADPLASVATATAGNVLGSVVTYAMGRFGRAALVRPAAAAERRMARAER
WFGRFGRPVLLLAWLPVVGDALCLLAGALRVGLASFVVLVTLGKLARYAALAWTVV
>Mature_136_residues
MIDWTLFGSALLSSTLFPGGSEALLLYRLHGGADPLASVATATAGNVLGSVVTYAMGRFGRAALVRPAAAAERRMARAER
WFGRFGRPVLLLAWLPVVGDALCLLAGALRVGLASFVVLVTLGKLARYAALAWTVV

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0489 [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=129, Percent_Identity=42.6356589147287, Blast_Score=93, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 14271; Mature: 14271

Theoretical pI: Translated: 11.57; Mature: 11.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDWTLFGSALLSSTLFPGGSEALLLYRLHGGADPLASVATATAGNVLGSVVTYAMGRFG
CCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
RAALVRPAAAAERRMARAERWFGRFGRPVLLLAWLPVVGDALCLLAGALRVGLASFVVLV
HHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLGKLARYAALAWTVV
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIDWTLFGSALLSSTLFPGGSEALLLYRLHGGADPLASVATATAGNVLGSVVTYAMGRFG
CCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
RAALVRPAAAAERRMARAERWFGRFGRPVLLLAWLPVVGDALCLLAGALRVGLASFVVLV
HHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLGKLARYAALAWTVV
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]