| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is katE [H]
Identifier: 74318329
GI number: 74318329
Start: 2384338
End: 2386551
Strand: Direct
Name: katE [H]
Synonym: Tbd_2311
Alternate gene names: 74318329
Gene position: 2384338-2386551 (Clockwise)
Preceding gene: 74318322
Following gene: 74318330
Centisome position: 81.94
GC content: 67.03
Gene sequence:
>2214_bases GTGCGGCGCCGATGCGCGCCCGGGTCCCGCGACGCCGCTTCAAGACAGTCGCCGCTGGCCGCCCGGCCTTGTCTAGCGCC CCTGAGCGCCTATAAAGACGAGTCCAAGCGCACGTTCAGGAAAGCAACGATGAGCCAGAAAAAAAAGCCGGCGAAGGCCG GCCCCGACGAAAATTTCGAGCGCGGCGCCGGGGGTGAAATCCACCAGACCGCCAACGGCGCGCATCCGCCGCTGACGACT AACGACGGTGTACCGATTTCCGACGACCAGAATTCGCTGCGCAGCCACCCGCGCGGCCCGACGCTGCTCGAGGATTTCGT CCTGCGCGACAAGATCACGCACTTCGACCACGAGCGCATTCCCGAACGCGTCGTCCACGCCCGCGGCAGCGCGGCGCACG GCTACTTCGAACTGACCGAATCGCTCGAGAAATACACGACCGCGCGCATCCTCACCGAGGTCGGCGAGAAGACCCCGGTG TTCACGCGGCTCTCGACCGTCGCCGGCGGCGCGGGCTCGGTCGACACGCCGCGCGACGTGCGCGGCTTCGCGGTCAAGTT CTACACCAAGGAAGGCAACTGGGACCTCGTCGGCAACAACATCCCCGTGTTCTTCATCCAGGACGCGATCAAGTTTCCCG ACCTCGTCCACTCGTTCAAGATGGAGCCCGACCGCGGCTTTCCGCAGTCGTCGACGGCGCACGACACCTTCTGGGACTAC GTGTCGCTCACGCCCGAGTCCATGCACATGATTCTGTGGATCATGTCCGACCGCACGACGCCGCGCTCCCTGCGCATGAT CGAGGCCTTCGGCGTGCACAGCTTCCGTCTCGTCAATGCGAAGGGCGCGTCGACCTTCGTCAAATTCCACTGGCGACCCA AGCTCGGCCTGCAATCGACGATCTGGGACGAGACGGTCAAGATCGCCGGCGCCGACCCCGACTTCCACCGCCGCGACCTT TTCGAGGCGATCAGCGAGGGCAATTTCCCGGAATGGGAGTTCGCCGTGCAGCTCTTCACCGAGGCCGACGCCGAGCGCTT CCCCTTCGACCATCTCGACGCGACCAAGCTCATCCCCGAAGAACTCGTGCCGCTCAAGGTCATCGGCCGCATGGTGCTCG ACCGCTGGCCGGACAATTTCTTCGCCGAGACCGAACAGGTCGCCTACTGCCCGACGCACGTCGTGCCCGGCATCGACTTT TCCAACGACCCGCTGCTGCAGGGCCGGCTCTTCTCCTACGTCGACACCCAGTTGCTGCGCTTCAACTCGCCGAATTTCCA CCAGGTGCCGGTCAACATGCCGAAGTGCCCGTTCGCCAACCTGCAGCGCGACGGCCACATGCAGATGGAGCGGCCGAAGG GGCGCGTGAACTACGAACCCAACACGCTCGGCACGGACACGCCGCGCGAGACGCCGCAAGGCTTCCGCAGCGCGGCCGTG ACCGAAAGCGGCGAGAAGGGCCGCATCCGCGCCGAGCGTTTCGCCGACCACTACAGCCAGGCGCGCCAGTTCTACGTCAG CCAGACCGAATACGAGCAGGCGCATATCGCGTCGACGCTCGTGTTCGAGCTCGCCAAGGTCGACCACGTTCACATCCGCG AGGCGATGGTCGGGCATTTGCGTCATGTCGACGAGGACCTCGCGCACCGCGTCGCGAAGGGGCTCGGCATCGATCCCTTG CCGCCGGCGCCCGAGGCCGCCGCGCCCGTGCAGGACCTGCCGCCCTCGCCCGCCCTGCAGATCATCGGCAACATGAAGGA CACGCTCGAAGGGCGCATGGTCGGCATCCTCGTCGGCGACGGCTCCGACGGCGCGCGCGTCGAGGCGCTGCGCCGGGCCG CGACGGACGCCGGCGCCGCCGTGAAGATCATCGCCGCGCACGTCGGTCAGGTGAAGCTCGCCAACGGCAAGATGCTCAAG GTCGACAAGCAGCTCGCCGGAACGCCGTCGGTCCTCTTCGACGCCGTGGCCGTCGTCGTCTCCGAGGACGCCGCGAAGAT GCTGCTGAAGGAGAGCGCGGCGCTCGATTTCGTCCACGACGCGTTCGGCCACCTCAAGGCGATCGCGAGCGACGCGGGCG GCCAGGCGCTGCTCGACGCCGTCCACGTCGTGCGCGACGCGGGTGTCGTCGATGCGGCCGACGTCGGCGCCTTCATCGCC GCGGCAAAAACGCGGCAGTGGGACCGCGAACCGTCGGTGCGACTACTCGCGTGA
Upstream 100 bases:
>100_bases CCGCGGTATCGCGCAAATTCAAGGACTTGGCGGAAGCGAGCCGGCGCCGGCGCGCGCCCTCGGTGCGCCTCGGGGGGCGC GCGCCGCAAATTGGTGCGAG
Downstream 100 bases:
>100_bases GCGCACGGCGCGCGGCGGAATAGCGCGGAGCGCGCGTCAACCTGCGCGCCGCGCAAAAGGCCTTGAGGGATTTTCGGCCC GTTGCGCGGGGCAGGCGATA
Product: catalase
Products: NA
Alternate protein names: KAT2 [H]
Number of amino acids: Translated: 737; Mature: 737
Protein sequence:
>737_residues MRRRCAPGSRDAASRQSPLAARPCLAPLSAYKDESKRTFRKATMSQKKKPAKAGPDENFERGAGGEIHQTANGAHPPLTT NDGVPISDDQNSLRSHPRGPTLLEDFVLRDKITHFDHERIPERVVHARGSAAHGYFELTESLEKYTTARILTEVGEKTPV FTRLSTVAGGAGSVDTPRDVRGFAVKFYTKEGNWDLVGNNIPVFFIQDAIKFPDLVHSFKMEPDRGFPQSSTAHDTFWDY VSLTPESMHMILWIMSDRTTPRSLRMIEAFGVHSFRLVNAKGASTFVKFHWRPKLGLQSTIWDETVKIAGADPDFHRRDL FEAISEGNFPEWEFAVQLFTEADAERFPFDHLDATKLIPEELVPLKVIGRMVLDRWPDNFFAETEQVAYCPTHVVPGIDF SNDPLLQGRLFSYVDTQLLRFNSPNFHQVPVNMPKCPFANLQRDGHMQMERPKGRVNYEPNTLGTDTPRETPQGFRSAAV TESGEKGRIRAERFADHYSQARQFYVSQTEYEQAHIASTLVFELAKVDHVHIREAMVGHLRHVDEDLAHRVAKGLGIDPL PPAPEAAAPVQDLPPSPALQIIGNMKDTLEGRMVGILVGDGSDGARVEALRRAATDAGAAVKIIAAHVGQVKLANGKMLK VDKQLAGTPSVLFDAVAVVVSEDAAKMLLKESAALDFVHDAFGHLKAIASDAGGQALLDAVHVVRDAGVVDAADVGAFIA AAKTRQWDREPSVRLLA
Sequences:
>Translated_737_residues MRRRCAPGSRDAASRQSPLAARPCLAPLSAYKDESKRTFRKATMSQKKKPAKAGPDENFERGAGGEIHQTANGAHPPLTT NDGVPISDDQNSLRSHPRGPTLLEDFVLRDKITHFDHERIPERVVHARGSAAHGYFELTESLEKYTTARILTEVGEKTPV FTRLSTVAGGAGSVDTPRDVRGFAVKFYTKEGNWDLVGNNIPVFFIQDAIKFPDLVHSFKMEPDRGFPQSSTAHDTFWDY VSLTPESMHMILWIMSDRTTPRSLRMIEAFGVHSFRLVNAKGASTFVKFHWRPKLGLQSTIWDETVKIAGADPDFHRRDL FEAISEGNFPEWEFAVQLFTEADAERFPFDHLDATKLIPEELVPLKVIGRMVLDRWPDNFFAETEQVAYCPTHVVPGIDF SNDPLLQGRLFSYVDTQLLRFNSPNFHQVPVNMPKCPFANLQRDGHMQMERPKGRVNYEPNTLGTDTPRETPQGFRSAAV TESGEKGRIRAERFADHYSQARQFYVSQTEYEQAHIASTLVFELAKVDHVHIREAMVGHLRHVDEDLAHRVAKGLGIDPL PPAPEAAAPVQDLPPSPALQIIGNMKDTLEGRMVGILVGDGSDGARVEALRRAATDAGAAVKIIAAHVGQVKLANGKMLK VDKQLAGTPSVLFDAVAVVVSEDAAKMLLKESAALDFVHDAFGHLKAIASDAGGQALLDAVHVVRDAGVVDAADVGAFIA AAKTRQWDREPSVRLLA >Mature_737_residues MRRRCAPGSRDAASRQSPLAARPCLAPLSAYKDESKRTFRKATMSQKKKPAKAGPDENFERGAGGEIHQTANGAHPPLTT NDGVPISDDQNSLRSHPRGPTLLEDFVLRDKITHFDHERIPERVVHARGSAAHGYFELTESLEKYTTARILTEVGEKTPV FTRLSTVAGGAGSVDTPRDVRGFAVKFYTKEGNWDLVGNNIPVFFIQDAIKFPDLVHSFKMEPDRGFPQSSTAHDTFWDY VSLTPESMHMILWIMSDRTTPRSLRMIEAFGVHSFRLVNAKGASTFVKFHWRPKLGLQSTIWDETVKIAGADPDFHRRDL FEAISEGNFPEWEFAVQLFTEADAERFPFDHLDATKLIPEELVPLKVIGRMVLDRWPDNFFAETEQVAYCPTHVVPGIDF SNDPLLQGRLFSYVDTQLLRFNSPNFHQVPVNMPKCPFANLQRDGHMQMERPKGRVNYEPNTLGTDTPRETPQGFRSAAV TESGEKGRIRAERFADHYSQARQFYVSQTEYEQAHIASTLVFELAKVDHVHIREAMVGHLRHVDEDLAHRVAKGLGIDPL PPAPEAAAPVQDLPPSPALQIIGNMKDTLEGRMVGILVGDGSDGARVEALRRAATDAGAAVKIIAAHVGQVKLANGKMLK VDKQLAGTPSVLFDAVAVVVSEDAAKMLLKESAALDFVHDAFGHLKAIASDAGGQALLDAVHVVRDAGVVDAADVGAFIA AAKTRQWDREPSVRLLA
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide. Could protect cells in nodules which have a high potential to produce hydrogen peroxide because of the strong reducing conditions requ
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family. HPII subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=476, Percent_Identity=42.6470588235294, Blast_Score=392, Evalue=1e-109, Organism=Escherichia coli, GI48994891, Length=676, Percent_Identity=50.1479289940828, Blast_Score=654, Evalue=0.0, Organism=Caenorhabditis elegans, GI71998444, Length=481, Percent_Identity=41.3721413721414, Blast_Score=382, Evalue=1e-106, Organism=Caenorhabditis elegans, GI25151141, Length=488, Percent_Identity=42.2131147540984, Blast_Score=377, Evalue=1e-104, Organism=Caenorhabditis elegans, GI25147792, Length=488, Percent_Identity=42.0081967213115, Blast_Score=377, Evalue=1e-104, Organism=Saccharomyces cerevisiae, GI6320462, Length=397, Percent_Identity=41.5617128463476, Blast_Score=318, Evalue=2e-87, Organism=Saccharomyces cerevisiae, GI6321525, Length=517, Percent_Identity=35.9767891682785, Blast_Score=300, Evalue=4e-82, Organism=Drosophila melanogaster, GI17981717, Length=481, Percent_Identity=40.5405405405405, Blast_Score=370, Evalue=1e-102, Organism=Drosophila melanogaster, GI19920968, Length=432, Percent_Identity=40.2777777777778, Blast_Score=345, Evalue=9e-95,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 81453; Mature: 81453
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRCAPGSRDAASRQSPLAARPCLAPLSAYKDESKRTFRKATMSQKKKPAKAGPDENFE CCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC RGAGGEIHQTANGAHPPLTTNDGVPISDDQNSLRSHPRGPTLLEDFVLRDKITHFDHERI CCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHH PERVVHARGSAAHGYFELTESLEKYTTARILTEVGEKTPVFTRLSTVAGGAGSVDTPRDV HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCC RGFAVKFYTKEGNWDLVGNNIPVFFIQDAIKFPDLVHSFKMEPDRGFPQSSTAHDTFWDY CCEEEEEEEECCCEEEECCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH VSLTPESMHMILWIMSDRTTPRSLRMIEAFGVHSFRLVNAKGASTFVKFHWRPKLGLQST HCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCHH IWDETVKIAGADPDFHRRDLFEAISEGNFPEWEFAVQLFTEADAERFPFDHLDATKLIPE HHHHHEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHCCCCCCCHHHHCHH ELVPLKVIGRMVLDRWPDNFFAETEQVAYCPTHVVPGIDFSNDPLLQGRLFSYVDTQLLR HCCHHHHHHHHHHHHCCCHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC FNSPNFHQVPVNMPKCPFANLQRDGHMQMERPKGRVNYEPNTLGTDTPRETPQGFRSAAV CCCCCCEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHH TESGEKGRIRAERFADHYSQARQFYVSQTEYEQAHIASTLVFELAKVDHVHIREAMVGHL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH RHVDEDLAHRVAKGLGIDPLPPAPEAAAPVQDLPPSPALQIIGNMKDTLEGRMVGILVGD HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHCHHHHCCCEEEEEEEEC GSDGARVEALRRAATDAGAAVKIIAAHVGQVKLANGKMLKVDKQLAGTPSVLFDAVAVVV CCCCHHHHHHHHHHCCCCHHHHHHHHHCCEEEECCCCEEEECHHHCCCHHHHHHHHHHHH SEDAAKMLLKESAALDFVHDAFGHLKAIASDAGGQALLDAVHVVRDAGVVDAADVGAFIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH AAKTRQWDREPSVRLLA HHHHHCCCCCCCCEECC >Mature Secondary Structure MRRRCAPGSRDAASRQSPLAARPCLAPLSAYKDESKRTFRKATMSQKKKPAKAGPDENFE CCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC RGAGGEIHQTANGAHPPLTTNDGVPISDDQNSLRSHPRGPTLLEDFVLRDKITHFDHERI CCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHH PERVVHARGSAAHGYFELTESLEKYTTARILTEVGEKTPVFTRLSTVAGGAGSVDTPRDV HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCC RGFAVKFYTKEGNWDLVGNNIPVFFIQDAIKFPDLVHSFKMEPDRGFPQSSTAHDTFWDY CCEEEEEEEECCCEEEECCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH VSLTPESMHMILWIMSDRTTPRSLRMIEAFGVHSFRLVNAKGASTFVKFHWRPKLGLQST HCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCHH IWDETVKIAGADPDFHRRDLFEAISEGNFPEWEFAVQLFTEADAERFPFDHLDATKLIPE HHHHHEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHCCCCCCCHHHHCHH ELVPLKVIGRMVLDRWPDNFFAETEQVAYCPTHVVPGIDFSNDPLLQGRLFSYVDTQLLR HCCHHHHHHHHHHHHCCCHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC FNSPNFHQVPVNMPKCPFANLQRDGHMQMERPKGRVNYEPNTLGTDTPRETPQGFRSAAV CCCCCCEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHH TESGEKGRIRAERFADHYSQARQFYVSQTEYEQAHIASTLVFELAKVDHVHIREAMVGHL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH RHVDEDLAHRVAKGLGIDPLPPAPEAAAPVQDLPPSPALQIIGNMKDTLEGRMVGILVGD HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHCHHHHCCCEEEEEEEEC GSDGARVEALRRAATDAGAAVKIIAAHVGQVKLANGKMLKVDKQLAGTPSVLFDAVAVVV CCCCHHHHHHHHHHCCCCHHHHHHHHHCCEEEECCCCEEEECHHHCCCHHHHHHHHHHHH SEDAAKMLLKESAALDFVHDAFGHLKAIASDAGGQALLDAVHVVRDAGVVDAADVGAFIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH AAKTRQWDREPSVRLLA HHHHHCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10198032; 11481431 [H]