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The map label for this gene is 74318330

Identifier: 74318330

GI number: 74318330

Start: 2386879

End: 2387328

Strand: Direct

Name: 74318330

Synonym: Tbd_2312

Alternate gene names: NA

Gene position: 2386879-2387328 (Clockwise)

Preceding gene: 74318329

Following gene: 74318331

Centisome position: 82.03

GC content: 60.44

Gene sequence:

>450_bases
ATGGCCAACATTTCGCGGTACGACCCGTTCAGCATGTCCCGGATCGACCCCTTCACCGACCTCGATGATTTCTTCAAGGG
CTTTTTCGTCCGCCCGGCACTCATGGAAGGCGGCGCGCAAGCCCCGCTGCAGATCAAGATGGACGTGAAGGAGAACGACA
ACGCCTACACCATCCACGCCGACATCCCCGGGGTGAAGAAGGAAGACATCCAGGTCAGCGTCGACGGCAACCAGGTCTCG
ATCAGCGCGGAAACCCGGAGCGAAAAGGAAGAGAAGGAAGGCGAAAAGGTCCTCCGTTCCGAGCGCCACGTCGGCAAGAT
CGCGCGCAGCTTCACGCTTCCTCATGAAGTCGACGACGCCCAGTGCCAGGCCAAATACAGCGACGGCGTGCTCGAACTGA
CGCTGCCGAAGAAGGCCGCCGCCTCGGCGAAGAAACTGTCGATCCAGTAA

Upstream 100 bases:

>100_bases
CGGCCGGTCTTGAATTAGACCGGGCCGCCACTACATTGAATGCATGGCCGCCCGGCGCGGCTTGAGGCTGTATTCACCAA
CTTCTTTTTGGAGAGCAATC

Downstream 100 bases:

>100_bases
GGCCGCGCAGCAGCGGTCGCTCCCCGCCTGCGCGTGCCGCGGCGTCCCTAGGGCGCCGCTTTTTTTTTGCCGGCCGCCCT
CGGCGGCGCCGCTTGTTTTT

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: T786P28D [H]

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MANISRYDPFSMSRIDPFTDLDDFFKGFFVRPALMEGGAQAPLQIKMDVKENDNAYTIHADIPGVKKEDIQVSVDGNQVS
ISAETRSEKEEKEGEKVLRSERHVGKIARSFTLPHEVDDAQCQAKYSDGVLELTLPKKAAASAKKLSIQ

Sequences:

>Translated_149_residues
MANISRYDPFSMSRIDPFTDLDDFFKGFFVRPALMEGGAQAPLQIKMDVKENDNAYTIHADIPGVKKEDIQVSVDGNQVS
ISAETRSEKEEKEGEKVLRSERHVGKIARSFTLPHEVDDAQCQAKYSDGVLELTLPKKAAASAKKLSIQ
>Mature_148_residues
ANISRYDPFSMSRIDPFTDLDDFFKGFFVRPALMEGGAQAPLQIKMDVKENDNAYTIHADIPGVKKEDIQVSVDGNQVSI
SAETRSEKEEKEGEKVLRSERHVGKIARSFTLPHEVDDAQCQAKYSDGVLELTLPKKAAASAKKLSIQ

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6319546, Length=142, Percent_Identity=32.3943661971831, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 16574; Mature: 16443

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANISRYDPFSMSRIDPFTDLDDFFKGFFVRPALMEGGAQAPLQIKMDVKENDNAYTIHA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCEEEEEEECCCCCEEEEEE
DIPGVKKEDIQVSVDGNQVSISAETRSEKEEKEGEKVLRSERHVGKIARSFTLPHEVDDA
CCCCCCCCCEEEEECCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
QCQAKYSDGVLELTLPKKAAASAKKLSIQ
CEEEECCCCEEEEEECCHHHCCCEEECCC
>Mature Secondary Structure 
ANISRYDPFSMSRIDPFTDLDDFFKGFFVRPALMEGGAQAPLQIKMDVKENDNAYTIHA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCEEEEEEECCCCCEEEEEE
DIPGVKKEDIQVSVDGNQVSISAETRSEKEEKEGEKVLRSERHVGKIARSFTLPHEVDDA
CCCCCCCCCEEEEECCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
QCQAKYSDGVLELTLPKKAAASAKKLSIQ
CEEEECCCCEEEEEECCHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9168610 [H]