Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is phnP [H]

Identifier: 74318306

GI number: 74318306

Start: 2363300

End: 2364067

Strand: Reverse

Name: phnP [H]

Synonym: Tbd_2288

Alternate gene names: 74318306

Gene position: 2364067-2363300 (Counterclockwise)

Preceding gene: 74318307

Following gene: 74318303

Centisome position: 81.24

GC content: 59.38

Gene sequence:

>768_bases
ATGCGCGTGACGTTTCTCGGTACGGGTGCCGCAGGCGGTGTGCCGCTTTACGGCTGCGATTGTCCGGCTTGCACGCGAGC
GCGGGCGGTGGTCGACTTTCGTCGCCAGCCTTGTACAGCACTTATAGAAGCTGGCGAAACCCGCATTCTGCTGGATGCCG
GCCTGACCGATCTCGCCGAGCGATTCCCGTCCGGCAGCCTGTCGGCCATCGTGCTGACCCATTTCCATCCCGATCACGTG
CAGGGTCTGTTTCCTCTGCGCTGGGGAATCGGTAAAAATATTCCAGTCTACGGCCCGCCAGATTCAGAAGGCTGCGCTGA
CCTCTACAAGAATCATGGCCTCCTCGAATTCCGGCGGCTCAGCAAGTTCGAGCCGGTCACGATCGGCAATCTGGTACTGA
CGCCGTTGCCCTTGATCCATTCGAAGGCAACGTTTGGCTACGCTATCGAAGACACCGACGGCCAGCGCTTCGCTTATCTG
ACCGACACCGCGGGCCTTCCGCCGCGGACGGAAGCGTTCTTGAAAAATTGGCGGCCTGCATCGTTCGCCTTGGACTGCAG
CTATCCACCGCAATCCGATTTGCCGCGCAACCACAACGATTTGACTCTCGCCCTGACGATTGCGGAAACCCTCGCGCCAG
CCAAGGTCTGGCTGACCCACGTCAGCCACGAACTTGACGCTTGGCTACTAGAGAACATCGGCGATCTGCCACCGCACATG
GCTGTTGCCTATGACTCACAAGTCGTATCGGATGCAGGCTTTCTATAG

Upstream 100 bases:

>100_bases
CTGGAAGTCATTGCGAACGACGCTGAATTGCACGTAGCCGGTGAACGCTTGGTACAGTTGTTGTCGGACGCCGACGCTTC
CAAACGAGCGTTTGCCTGAC

Downstream 100 bases:

>100_bases
CAATGCCGATAAGAGGCGCGACGTGAGTGCCGCCGCATTGCGGACATTCGTGAGGGGCCGGGCACTCATCAACCGTCTGC
TTCGGCCGAATATGAGGCAT

Product: carbon-phosphorus lyase complex accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MRVTFLGTGAAGGVPLYGCDCPACTRARAVVDFRRQPCTALIEAGETRILLDAGLTDLAERFPSGSLSAIVLTHFHPDHV
QGLFPLRWGIGKNIPVYGPPDSEGCADLYKNHGLLEFRRLSKFEPVTIGNLVLTPLPLIHSKATFGYAIEDTDGQRFAYL
TDTAGLPPRTEAFLKNWRPASFALDCSYPPQSDLPRNHNDLTLALTIAETLAPAKVWLTHVSHELDAWLLENIGDLPPHM
AVAYDSQVVSDAGFL

Sequences:

>Translated_255_residues
MRVTFLGTGAAGGVPLYGCDCPACTRARAVVDFRRQPCTALIEAGETRILLDAGLTDLAERFPSGSLSAIVLTHFHPDHV
QGLFPLRWGIGKNIPVYGPPDSEGCADLYKNHGLLEFRRLSKFEPVTIGNLVLTPLPLIHSKATFGYAIEDTDGQRFAYL
TDTAGLPPRTEAFLKNWRPASFALDCSYPPQSDLPRNHNDLTLALTIAETLAPAKVWLTHVSHELDAWLLENIGDLPPHM
AVAYDSQVVSDAGFL
>Mature_255_residues
MRVTFLGTGAAGGVPLYGCDCPACTRARAVVDFRRQPCTALIEAGETRILLDAGLTDLAERFPSGSLSAIVLTHFHPDHV
QGLFPLRWGIGKNIPVYGPPDSEGCADLYKNHGLLEFRRLSKFEPVTIGNLVLTPLPLIHSKATFGYAIEDTDGQRFAYL
TDTAGLPPRTEAFLKNWRPASFALDCSYPPQSDLPRNHNDLTLALTIAETLAPAKVWLTHVSHELDAWLLENIGDLPPHM
AVAYDSQVVSDAGFL

Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]

COG id: COG1235

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790530, Length=243, Percent_Identity=50.2057613168724, Blast_Score=248, Evalue=2e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR017693 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 27819; Mature: 27819

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVTFLGTGAAGGVPLYGCDCPACTRARAVVDFRRQPCTALIEAGETRILLDAGLTDLAE
CEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHCCCEEEEEECCHHHHHH
RFPSGSLSAIVLTHFHPDHVQGLFPLRWGIGKNIPVYGPPDSEGCADLYKNHGLLEFRRL
HCCCCCEEEEEEEECCHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEEHHHH
SKFEPVTIGNLVLTPLPLIHSKATFGYAIEDTDGQRFAYLTDTAGLPPRTEAFLKNWRPA
CCCCCEEECCEECCCCCHHCCCCCCCEEEECCCCCEEEEEECCCCCCCCHHHHHHCCCCC
SFALDCSYPPQSDLPRNHNDLTLALTIAETLAPAKVWLTHVSHELDAWLLENIGDLPPHM
CEEEECCCCCCCCCCCCCCCEEEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCE
AVAYDSQVVSDAGFL
EEEECCHHHHCCCCC
>Mature Secondary Structure
MRVTFLGTGAAGGVPLYGCDCPACTRARAVVDFRRQPCTALIEAGETRILLDAGLTDLAE
CEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHCCCEEEEEECCHHHHHH
RFPSGSLSAIVLTHFHPDHVQGLFPLRWGIGKNIPVYGPPDSEGCADLYKNHGLLEFRRL
HCCCCCEEEEEEEECCHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEEHHHH
SKFEPVTIGNLVLTPLPLIHSKATFGYAIEDTDGQRFAYLTDTAGLPPRTEAFLKNWRPA
CCCCCEEECCEECCCCCHHCCCCCCCEEEECCCCCEEEEEECCCCCCCCHHHHHHCCCCC
SFALDCSYPPQSDLPRNHNDLTLALTIAETLAPAKVWLTHVSHELDAWLLENIGDLPPHM
CEEEECCCCCCCCCCCCCCCEEEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCE
AVAYDSQVVSDAGFL
EEEECCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2155230; 1840580; 7610040; 9278503 [H]