| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is phnN [H]
Identifier: 74318307
GI number: 74318307
Start: 2364069
End: 2364641
Strand: Reverse
Name: phnN [H]
Synonym: Tbd_2289
Alternate gene names: 74318307
Gene position: 2364641-2364069 (Counterclockwise)
Preceding gene: 74318308
Following gene: 74318306
Centisome position: 81.26
GC content: 63.35
Gene sequence:
>573_bases ATGTCTGAAGGGAAACTGTTCTACGTCATCGGCCCTTCCGGCAGTGGCAAGGACAGCCTGATGCGCTACGGCCGCGAGCG TCTCGCCGGCGACCCCGGCGTTGTCTTCGCCCACCGCTACATCACGCGGCCGGTGGAACTTCACGGGGAGAATCACGTCG CCCTGACCGAGGACGAATTCGATGCCCGCCTCGCTACCGGCCTCTTCGCCCTGCACTGGGACAGCCACGGCCTGCGCTAC GGCATCGGCCGGGAAATCAACCTTTGGCTGGCCAAGGGCTGCAACGTGGTGTTGAACGGCTCGCGCGAATACCTGCCAGA GGCAAGGCGCCGCTACCCGGGGTTGACCGCGATTCTGGTCAACGTTTCGCCCGAAGTTCTTGCCGAGAGACTGCGCGCCC GTGGCCGGGAAACGGAAGATCAGATATCCCGGCGGGTCGCACGCGCGAAGCAATTCATGCACCCTGAGGGGCGCCTGGAA GTCATTGCGAACGACGCTGAATTGCACGTAGCCGGTGAACGCTTGGTACAGTTGTTGTCGGACGCCGACGCTTCCAAACG AGCGTTTGCCTGA
Upstream 100 bases:
>100_bases AGGCGCGCCGATCTGGTCGCCGTCGCCCACATCAACGGGCTGGCCCAAGCGAGCAGCGTGTTTTCGGCGGGCAAGCCGGT CTTCGAAGCCCGTTTCGACC
Downstream 100 bases:
>100_bases CATGCGCGTGACGTTTCTCGGTACGGGTGCCGCAGGCGGTGTGCCGCTTTACGGCTGCGATTGTCCGGCTTGCACGCGAG CGCGGGCGGTGGTCGACTTT
Product: guanylate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MSEGKLFYVIGPSGSGKDSLMRYGRERLAGDPGVVFAHRYITRPVELHGENHVALTEDEFDARLATGLFALHWDSHGLRY GIGREINLWLAKGCNVVLNGSREYLPEARRRYPGLTAILVNVSPEVLAERLRARGRETEDQISRRVARAKQFMHPEGRLE VIANDAELHVAGERLVQLLSDADASKRAFA
Sequences:
>Translated_190_residues MSEGKLFYVIGPSGSGKDSLMRYGRERLAGDPGVVFAHRYITRPVELHGENHVALTEDEFDARLATGLFALHWDSHGLRY GIGREINLWLAKGCNVVLNGSREYLPEARRRYPGLTAILVNVSPEVLAERLRARGRETEDQISRRVARAKQFMHPEGRLE VIANDAELHVAGERLVQLLSDADASKRAFA >Mature_189_residues SEGKLFYVIGPSGSGKDSLMRYGRERLAGDPGVVFAHRYITRPVELHGENHVALTEDEFDARLATGLFALHWDSHGLRYG IGREINLWLAKGCNVVLNGSREYLPEARRRYPGLTAILVNVSPEVLAERLRARGRETEDQISRRVARAKQFMHPEGRLEV IANDAELHVAGERLVQLLSDADASKRAFA
Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]
COG id: COG3709
COG function: function code P; Uncharacterized component of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790532, Length=177, Percent_Identity=45.1977401129944, Blast_Score=146, Evalue=7e-37, Organism=Escherichia coli, GI1790080, Length=153, Percent_Identity=32.6797385620915, Blast_Score=73, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR012699 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: NA
Molecular weight: Translated: 21260; Mature: 21129
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEGKLFYVIGPSGSGKDSLMRYGRERLAGDPGVVFAHRYITRPVELHGENHVALTEDEF CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHCCCCEECCCCCEEECCCHH DARLATGLFALHWDSHGLRYGIGREINLWLAKGCNVVLNGSREYLPEARRRYPGLTAILV HHHHHHCEEEEEECCCCCEECCCCEEEEEEECCCCEEECCCHHHHHHHHHHCCCEEEEEE NVSPEVLAERLRARGRETEDQISRRVARAKQFMHPEGRLEVIANDAELHVAGERLVQLLS ECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEHHHHHHHHHH DADASKRAFA CCCCCCCCCC >Mature Secondary Structure SEGKLFYVIGPSGSGKDSLMRYGRERLAGDPGVVFAHRYITRPVELHGENHVALTEDEF CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHCCCCEECCCCCEEECCCHH DARLATGLFALHWDSHGLRYGIGREINLWLAKGCNVVLNGSREYLPEARRRYPGLTAILV HHHHHHCEEEEEECCCCCEECCCCEEEEEEECCCCEEECCCHHHHHHHHHHCCCEEEEEE NVSPEVLAERLRARGRETEDQISRRVARAKQFMHPEGRLEVIANDAELHVAGERLVQLLS ECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEHHHHHHHHHH DADASKRAFA CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]