| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318150
Identifier: 74318150
GI number: 74318150
Start: 2219327
End: 2219989
Strand: Direct
Name: 74318150
Synonym: Tbd_2132
Alternate gene names: NA
Gene position: 2219327-2219989 (Clockwise)
Preceding gene: 74318149
Following gene: 74318152
Centisome position: 76.27
GC content: 62.29
Gene sequence:
>663_bases ATGAATCCTGCCATCAACGAAGCCGACGTCTGCCTGTTGCATGAACCGATCGTCGGCGCTTTCGGACTTCCCGGAGACTC GCCTTTCGTCAGTATCAAGGGCGACCCCAGCCTGCGCGAAACCGTTCCGCTGCGACCGCGGCAGAACTCGCGGCTCGACC GGATCGCCAGCGAAGTGCTTGCGACCTGCGCGACACTTCTGCGCGAAACCGGGATCTATGCGATCTACGTCGGCTTCAAC AGCTCCGAGGTGAGGACCGAGTCGATCTTCAATCCTTTTGCCTATGAGGTGCACGACGCCGAGGATCTGGTCAAGCCCGG CTATGCGGAGCGTCACTTCGTGCAGGTCCCCTACGCGGAAAAGATGCGCTCGATCGCGTGGATGCGCGGCATCGTCCAGA CCGGTCCGTTGCGCCAGTATCTGCCGTCCTCCTGGCAGCAACTGATGGACGAGGCGCGTACGCAAGCGACCCCGCTGACG CCCGAGCGCATCGACGAAATCGTGCACAGCCTCGACGTGTTGCGCGCGATCGACGGCTATTACCTGCGCAACGCCGCCAT CTCGCTGTCGGAGGGCCTCGTCCGCGCATCCTACAACTGCGACGGGACCTATATCGTTCGCGCCGAATACTTTCCCGAGT TCGTTCGCCTCAACACGCCCTGA
Upstream 100 bases:
>100_bases CCTGTTCCCGAGCCCGCGCGAGGCCTGGCGGGTTGCGGGCCTGCCGAATCCGGGCGAGGAGGCGAAGGCGTATTTTTCGG CACAGTGAGACAATGGCGGG
Downstream 100 bases:
>100_bases GCCGCCGCCTCAGTCAAGCGGGCTGTCGACGTAGGCGCGTCCTCGAGGGCAGCCGGAATTGTAGTGTTTCGCGCCGGCAC GAACATAGGGAAGCGGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MNPAINEADVCLLHEPIVGAFGLPGDSPFVSIKGDPSLRETVPLRPRQNSRLDRIASEVLATCATLLRETGIYAIYVGFN SSEVRTESIFNPFAYEVHDAEDLVKPGYAERHFVQVPYAEKMRSIAWMRGIVQTGPLRQYLPSSWQQLMDEARTQATPLT PERIDEIVHSLDVLRAIDGYYLRNAAISLSEGLVRASYNCDGTYIVRAEYFPEFVRLNTP
Sequences:
>Translated_220_residues MNPAINEADVCLLHEPIVGAFGLPGDSPFVSIKGDPSLRETVPLRPRQNSRLDRIASEVLATCATLLRETGIYAIYVGFN SSEVRTESIFNPFAYEVHDAEDLVKPGYAERHFVQVPYAEKMRSIAWMRGIVQTGPLRQYLPSSWQQLMDEARTQATPLT PERIDEIVHSLDVLRAIDGYYLRNAAISLSEGLVRASYNCDGTYIVRAEYFPEFVRLNTP >Mature_220_residues MNPAINEADVCLLHEPIVGAFGLPGDSPFVSIKGDPSLRETVPLRPRQNSRLDRIASEVLATCATLLRETGIYAIYVGFN SSEVRTESIFNPFAYEVHDAEDLVKPGYAERHFVQVPYAEKMRSIAWMRGIVQTGPLRQYLPSSWQQLMDEARTQATPLT PERIDEIVHSLDVLRAIDGYYLRNAAISLSEGLVRASYNCDGTYIVRAEYFPEFVRLNTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24752; Mature: 24752
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPAINEADVCLLHEPIVGAFGLPGDSPFVSIKGDPSLRETVPLRPRQNSRLDRIASEVL CCCCCCCCCEEEEECCCHHCCCCCCCCCEEEECCCCCHHHCCCCCCCCCCHHHHHHHHHH ATCATLLRETGIYAIYVGFNSSEVRTESIFNPFAYEVHDAEDLVKPGYAERHFVQVPYAE HHHHHHHHHCCEEEEEEECCCCHHHHHHHCCCHHEEECCHHHHHCCCCCCCEEEECCHHH KMRSIAWMRGIVQTGPLRQYLPSSWQQLMDEARTQATPLTPERIDEIVHSLDVLRAIDGY HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH YLRNAAISLSEGLVRASYNCDGTYIVRAEYFPEFVRLNTP HHHHHHHHHHCCCEEEECCCCCEEEEEECCCCHHEEECCC >Mature Secondary Structure MNPAINEADVCLLHEPIVGAFGLPGDSPFVSIKGDPSLRETVPLRPRQNSRLDRIASEVL CCCCCCCCCEEEEECCCHHCCCCCCCCCEEEECCCCCHHHCCCCCCCCCCHHHHHHHHHH ATCATLLRETGIYAIYVGFNSSEVRTESIFNPFAYEVHDAEDLVKPGYAERHFVQVPYAE HHHHHHHHHCCEEEEEEECCCCHHHHHHHCCCHHEEECCHHHHHCCCCCCCEEEECCHHH KMRSIAWMRGIVQTGPLRQYLPSSWQQLMDEARTQATPLTPERIDEIVHSLDVLRAIDGY HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH YLRNAAISLSEGLVRASYNCDGTYIVRAEYFPEFVRLNTP HHHHHHHHHHCCCEEEECCCCCEEEEEECCCCHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA