Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is yccK [C]

Identifier: 74318149

GI number: 74318149

Start: 2218982

End: 2219314

Strand: Direct

Name: yccK [C]

Synonym: Tbd_2131

Alternate gene names: 74318149

Gene position: 2218982-2219314 (Clockwise)

Preceding gene: 74318148

Following gene: 74318150

Centisome position: 76.26

GC content: 64.56

Gene sequence:

>333_bases
ATGCGCGTACACCAAGATTCAGCGGTCGCTGCCGTCTTCGACCCCGACGGCTTCCTGCTCGACCCAACGATGTGGAGCGA
AAGTCTGGCCGACCGCATCGCCCAGACGGACGGAATCGGCGAGCTGAACGCCCAGCAATTGGGCCTGCTGCACACCCTGC
GACGCGAATTTGCACGCAACGGCACGATCCCCGCGTTGAATCATGTCTGCCACGTCAGCGGCGAGGATGCCCAGTGTCTG
CATCACCTGTTCCCGAGCCCGCGCGAGGCCTGGCGGGTTGCGGGCCTGCCGAATCCGGGCGAGGAGGCGAAGGCGTATTT
TTCGGCACAGTGA

Upstream 100 bases:

>100_bases
CCGAATTCGCATTGCGCGGTCTCAGCGACAGCCACGGCGCGATTCCGCGCCGTGAATGCGAATGCTATAAGTAGAAGTCT
TTCCGACGCAGGAGGATGAA

Downstream 100 bases:

>100_bases
GACAATGGCGGGATGAATCCTGCCATCAACGAAGCCGACGTCTGCCTGTTGCATGAACCGATCGTCGGCGCTTTCGGACT
TCCCGGAGACTCGCCTTTCG

Product: putative dissimilatory sulfite reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MRVHQDSAVAAVFDPDGFLLDPTMWSESLADRIAQTDGIGELNAQQLGLLHTLRREFARNGTIPALNHVCHVSGEDAQCL
HHLFPSPREAWRVAGLPNPGEEAKAYFSAQ

Sequences:

>Translated_110_residues
MRVHQDSAVAAVFDPDGFLLDPTMWSESLADRIAQTDGIGELNAQQLGLLHTLRREFARNGTIPALNHVCHVSGEDAQCL
HHLFPSPREAWRVAGLPNPGEEAKAYFSAQ
>Mature_110_residues
MRVHQDSAVAAVFDPDGFLLDPTMWSESLADRIAQTDGIGELNAQQLGLLHTLRREFARNGTIPALNHVCHVSGEDAQCL
HHLFPSPREAWRVAGLPNPGEEAKAYFSAQ

Specific function: Unknown

COG id: COG2920

COG function: function code P; Dissimilatory sulfite reductase (desulfoviridin), gamma subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12088; Mature: 12088

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVHQDSAVAAVFDPDGFLLDPTMWSESLADRIAQTDGIGELNAQQLGLLHTLRREFARN
CCCCCCCCEEEEECCCCCEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC
GTIPALNHVCHVSGEDAQCLHHLFPSPREAWRVAGLPNPGEEAKAYFSAQ
CCCCCHHHEECCCCCHHHHHHHHCCCHHHHEEECCCCCCCHHHCEECCCC
>Mature Secondary Structure
MRVHQDSAVAAVFDPDGFLLDPTMWSESLADRIAQTDGIGELNAQQLGLLHTLRREFARN
CCCCCCCCEEEEECCCCCEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC
GTIPALNHVCHVSGEDAQCLHHLFPSPREAWRVAGLPNPGEEAKAYFSAQ
CCCCCHHHEECCCCCHHHHHHHHCCCHHHHEEECCCCCCCHHHCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA