| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is ilvE [H]
Identifier: 74318152
GI number: 74318152
Start: 2220861
End: 2221784
Strand: Direct
Name: ilvE [H]
Synonym: Tbd_2134
Alternate gene names: 74318152
Gene position: 2220861-2221784 (Clockwise)
Preceding gene: 74318150
Following gene: 74318153
Centisome position: 76.32
GC content: 63.53
Gene sequence:
>924_bases ATGTCCATGGCCGACCGCGACGGCGTCATATGGTACGACGGCAAACTCGTACCATGGCGCGACGCTACCACCCACGTCCT CACCCATACCCTGCACTACGGCATGGGTGTCTTCGAGGGCGTGCGCGCCTACAAGGCCGAACAGGGCACGGCGATCTTCC GCCTGGACGAGCACACCAAGCGCCTCTTCAACTCGGCGCATATCCTCGGCATGAAACTGCCTTTCGACGCGGCGACGCTT TCGGAAGCGCAGCGCATGGTCGTGCGCGAGAACAAGCTCGAGTCGGGCTACCTGCGGCCGATGGCGTTCTTCGGCTCGGA GGCGATGGGCATTTCGGCGAAGAATCTTTCGGTGCACGTGATCGTCGCCGCCTGGCCCTGGGGCACCTACCTCGGCAAGG AGGCTCTCGAAAACGGAATCCGCGTGAAGACGAGCTCGTTCACGCGTCACCACTCCAACGTGACGATGTGCAAGGCCAAG GCCAACGGCAACTACATGAACTCGATCCTCGCGCACAAGGAAGCCGAGATGGACGGCTACGACGAGGCGCTGCTGCTCGA CGTCGACGGCTTCGTCTCCGAAGGCTCCGGCGAGAACATCTTCATCGTGCGCGACGGCAAGCTCTATACGCCCGACCCGA GCTCCGCGCTCGTCGGCCTCACGCGTGACACGATCATCCAGCTCGCCGAGGAAATCGGCCTCACGGTGATCGAAAAGCGC ATCACGCGCGACGAGGTCTATATCGCGGACGAGGCGTTCTTCACCGGCACGGCTGCCGAAGTCACGCCGATCCGCGAGCT GGACAACCGCACGATCGGTTCCGGTAGCCGGGGCCCGGTCACGGAACGCCTGCAATCGATGTACTTCGATTGCGTGCACG GCCGCGCAGCCAATCACCTCGACTGGCTCACGCCGGTAGCGTAG
Upstream 100 bases:
>100_bases AGCGCTCCAGACCGCGAAAACATCGCGCAGGCGCGCGCTTCGCGCCCCGGAGATTCCGGTAAAATTCGTGCTTTCCATTC GTTCACAGAGACTTCTCACC
Downstream 100 bases:
>100_bases GGAGGCCTCATGAGCGAGCCGCGTGACGACAACCTCGAACGCCCTGATGGCAAAGCGAACAACACCCAGCGCGTGATCGA AGTCAGCGAAAGCGATCTGC
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT [H]
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MSMADRDGVIWYDGKLVPWRDATTHVLTHTLHYGMGVFEGVRAYKAEQGTAIFRLDEHTKRLFNSAHILGMKLPFDAATL SEAQRMVVRENKLESGYLRPMAFFGSEAMGISAKNLSVHVIVAAWPWGTYLGKEALENGIRVKTSSFTRHHSNVTMCKAK ANGNYMNSILAHKEAEMDGYDEALLLDVDGFVSEGSGENIFIVRDGKLYTPDPSSALVGLTRDTIIQLAEEIGLTVIEKR ITRDEVYIADEAFFTGTAAEVTPIRELDNRTIGSGSRGPVTERLQSMYFDCVHGRAANHLDWLTPVA
Sequences:
>Translated_307_residues MSMADRDGVIWYDGKLVPWRDATTHVLTHTLHYGMGVFEGVRAYKAEQGTAIFRLDEHTKRLFNSAHILGMKLPFDAATL SEAQRMVVRENKLESGYLRPMAFFGSEAMGISAKNLSVHVIVAAWPWGTYLGKEALENGIRVKTSSFTRHHSNVTMCKAK ANGNYMNSILAHKEAEMDGYDEALLLDVDGFVSEGSGENIFIVRDGKLYTPDPSSALVGLTRDTIIQLAEEIGLTVIEKR ITRDEVYIADEAFFTGTAAEVTPIRELDNRTIGSGSRGPVTERLQSMYFDCVHGRAANHLDWLTPVA >Mature_306_residues SMADRDGVIWYDGKLVPWRDATTHVLTHTLHYGMGVFEGVRAYKAEQGTAIFRLDEHTKRLFNSAHILGMKLPFDAATLS EAQRMVVRENKLESGYLRPMAFFGSEAMGISAKNLSVHVIVAAWPWGTYLGKEALENGIRVKTSSFTRHHSNVTMCKAKA NGNYMNSILAHKEAEMDGYDEALLLDVDGFVSEGSGENIFIVRDGKLYTPDPSSALVGLTRDTIIQLAEEIGLTVIEKRI TRDEVYIADEAFFTGTAAEVTPIRELDNRTIGSGSRGPVTERLQSMYFDCVHGRAANHLDWLTPVA
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI50658084, Length=334, Percent_Identity=25.748502994012, Blast_Score=85, Evalue=8e-17, Organism=Escherichia coli, GI48994963, Length=299, Percent_Identity=47.1571906354515, Blast_Score=288, Evalue=2e-79, Organism=Caenorhabditis elegans, GI17565728, Length=281, Percent_Identity=28.1138790035587, Blast_Score=83, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6322608, Length=283, Percent_Identity=25.7950530035336, Blast_Score=78, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6322002, Length=333, Percent_Identity=24.024024024024, Blast_Score=73, Evalue=6e-14,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005785 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 34076; Mature: 33945
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMADRDGVIWYDGKLVPWRDATTHVLTHTLHYGMGVFEGVRAYKAEQGTAIFRLDEHTK CCCCCCCCEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHH RLFNSAHILGMKLPFDAATLSEAQRMVVRENKLESGYLRPMAFFGSEAMGISAKNLSVHV HHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCEEECCEEEEE IVAAWPWGTYLGKEALENGIRVKTSSFTRHHSNVTMCKAKANGNYMNSILAHKEAEMDGY EEEECCCHHHHHHHHHHCCCEEEECCCCEECCCEEEEEEECCCCHHHHHHHHHHCCCCCC DEALLLDVDGFVSEGSGENIFIVRDGKLYTPDPSSALVGLTRDTIIQLAEEIGLTVIEKR CCEEEEEECCCCCCCCCCEEEEEECCEEECCCCCCCEEECHHHHHHHHHHHHCHHHHHHH ITRDEVYIADEAFFTGTAAEVTPIRELDNRTIGSGSRGPVTERLQSMYFDCVHGRAANHL HCCCEEEEECCCEECCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC DWLTPVA CCCCCCC >Mature Secondary Structure SMADRDGVIWYDGKLVPWRDATTHVLTHTLHYGMGVFEGVRAYKAEQGTAIFRLDEHTK CCCCCCCEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHH RLFNSAHILGMKLPFDAATLSEAQRMVVRENKLESGYLRPMAFFGSEAMGISAKNLSVHV HHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCEEECCEEEEE IVAAWPWGTYLGKEALENGIRVKTSSFTRHHSNVTMCKAKANGNYMNSILAHKEAEMDGY EEEECCCHHHHHHHHHHCCCEEEECCCCEECCCEEEEEEECCCCHHHHHHHHHHCCCCCC DEALLLDVDGFVSEGSGENIFIVRDGKLYTPDPSSALVGLTRDTIIQLAEEIGLTVIEKR CCEEEEEECCCCCCCCCCEEEEEECCEEECCCCCCCEEECHHHHHHHHHHHHCHHHHHHH ITRDEVYIADEAFFTGTAAEVTPIRELDNRTIGSGSRGPVTERLQSMYFDCVHGRAANHL HCCCEEEEECCCEECCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC DWLTPVA CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]