| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318135
Identifier: 74318135
GI number: 74318135
Start: 2205947
End: 2206453
Strand: Reverse
Name: 74318135
Synonym: Tbd_2117
Alternate gene names: NA
Gene position: 2206453-2205947 (Counterclockwise)
Preceding gene: 74318136
Following gene: 74318134
Centisome position: 75.83
GC content: 59.96
Gene sequence:
>507_bases ATGCGCCAACTGTTTCTTGCTTTCGTCCTGCTACTGGCGGCGCCTGCCTGGGCCGAGACGCGCGATCCGGCGAGCCATTT CTTCCAGGCCAAGTTCGGCGATTTCCAGGCCGAACTCGATGCTGCGCGGGAGCAGGGCAAGAAAGGCATCTTTCTGTTCT TCGAGATGGACGAATGCCCATTCTGCGAGCGCATGAGAACGACGATCCTCAATCAGAGCGACGTGCAGGACGCCTACCGC GCGCAATTTCTCGTCTATTCGATCGACGTGAACGGCGACACGTCGATGACCGACTTCAAGGGCAAGGCGACGACCGAAAA GGATTTCGCGTTCGCGCACCGCGTGCGCGCGACGCCGACCCTGCTGTTCTTCGACCTCGATGGCAAACTTATCGCCCGTC ACACGGGGCCGACCAAGGATAAAGCCGAGTTCCTGTTGCTCGCGCGTTACGTCGTCGACGGGGCCTACGCGAACCAGCCG TTCACTCGCTACAAACAGGGCAAATGA
Upstream 100 bases:
>100_bases AAAATGGTCGCGCAGCAGGTCGGTGCCGTCACGCGCGAAGCGGTGGAAAGCTATCTCAAGGGCAAAGGGGCCCGGCCCGC AAAATAATCGGGAGATGTCC
Downstream 100 bases:
>100_bases AGCGCGCGGCCTGGGTCGCGTTGTTGAGCGTCCTGCCGCTGACGGCGGTCGCTGAACCGCTGACGCTCGAGGCCGCGCTC GCTGCCGCCGCGGCACCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Thioredoxin-Like Protein; Thioredoxin SoxW Protein
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MRQLFLAFVLLLAAPAWAETRDPASHFFQAKFGDFQAELDAAREQGKKGIFLFFEMDECPFCERMRTTILNQSDVQDAYR AQFLVYSIDVNGDTSMTDFKGKATTEKDFAFAHRVRATPTLLFFDLDGKLIARHTGPTKDKAEFLLLARYVVDGAYANQP FTRYKQGK
Sequences:
>Translated_168_residues MRQLFLAFVLLLAAPAWAETRDPASHFFQAKFGDFQAELDAAREQGKKGIFLFFEMDECPFCERMRTTILNQSDVQDAYR AQFLVYSIDVNGDTSMTDFKGKATTEKDFAFAHRVRATPTLLFFDLDGKLIARHTGPTKDKAEFLLLARYVVDGAYANQP FTRYKQGK >Mature_168_residues MRQLFLAFVLLLAAPAWAETRDPASHFFQAKFGDFQAELDAAREQGKKGIFLFFEMDECPFCERMRTTILNQSDVQDAYR AQFLVYSIDVNGDTSMTDFKGKATTEKDFAFAHRVRATPTLLFFDLDGKLIARHTGPTKDKAEFLLLARYVVDGAYANQP FTRYKQGK
Specific function: Unknown
COG id: COG2143
COG function: function code O; Thioredoxin-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19187; Mature: 19187
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQLFLAFVLLLAAPAWAETRDPASHFFQAKFGDFQAELDAAREQGKKGIFLFFEMDECP CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCC FCERMRTTILNQSDVQDAYRAQFLVYSIDVNGDTSMTDFKGKATTEKDFAFAHRVRATPT HHHHHHHHHCCCHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCE LLFFDLDGKLIARHTGPTKDKAEFLLLARYVVDGAYANQPFTRYKQGK EEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MRQLFLAFVLLLAAPAWAETRDPASHFFQAKFGDFQAELDAAREQGKKGIFLFFEMDECP CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCC FCERMRTTILNQSDVQDAYRAQFLVYSIDVNGDTSMTDFKGKATTEKDFAFAHRVRATPT HHHHHHHHHCCCHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCE LLFFDLDGKLIARHTGPTKDKAEFLLLARYVVDGAYANQPFTRYKQGK EEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA