Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74318134

Identifier: 74318134

GI number: 74318134

Start: 2204688

End: 2205950

Strand: Reverse

Name: 74318134

Synonym: Tbd_2116

Alternate gene names: NA

Gene position: 2205950-2204688 (Counterclockwise)

Preceding gene: 74318135

Following gene: 74318133

Centisome position: 75.81

GC content: 67.46

Gene sequence:

>1263_bases
ATGAAGCGCGCGGCCTGGGTCGCGTTGTTGAGCGTCCTGCCGCTGACGGCGGTCGCTGAACCGCTGACGCTCGAGGCCGC
GCTCGCTGCCGCCGCGGCACCGCATCCCGAGCGGCGCATCGCCGAAAGCGACCTCGCGCTTGCGCGGGCGGAGCGTCTGC
AGGCCGCAAGCCGCAGGGATTTCAGCCTTTACCTCGATGGCGCGCTGCGTAGCGGACGCCGGCCCGATGACGGCTGGAAA
CCCGACAATGCGCTGCGTCTCGTCGCGCGCAAGCCGGTCCTCGATTTCGGGCGCAGCAGCGACAGCATCACGGCCGCCGA
GCGAGGCGTCGACGCGCGCGAGGCCGAGTTGCTCAGCACGCTGAGCGCGCGACGCGTCGACATCATGGCGCGTTACTTCG
ACGTCCTGCTCGCCGACATGCAGTACGCCGCCGACAATGAATTCATGGCGGTCGCCTACGTGTCCTGGGACAACGCCAGC
GACCGCTTCGAGGTCGGCGACATCAGCCAGCCGGAATTGCTGCGTCTGGAAGCCGACTATCAGGACATTCGCGAGCGCCG
CAACGCGAGCATGCAGCGCATGCGCATGGCACGCCAACGGCTCGCTCACGCGATCAATCGACCCGCCGAGTTGCCGGATG
AGCTTGTCGAACCTGTGCTGGCCGACAACCGGCGTGCGTTGCCCGAATTCGACCGGCTGCTGGCCTGGGTGATGGAAAAC
AACCCGCGCCTGCGCGCGCTGAAGGCTGAAGTCGCCGCCGCCGAGGCGCGCATCGCGGCCGTGCGCAACGAACGCAATCC
GACCCTCGACGTCGAGGTGGCGGGCGCCCGCTACAGCCGCGAATCGACGACGCGCGACGACGTCAGTGCCGGCCTCGTGT
TCACCGTACCCTTCTATCAGGGCAGACGCGTCGACGCGCGCATAGCCCGCGAACTGGCGCAAAAGGAACGCAGCGCGGCC
GAATTGGAGAAGCTCGGCCTCGAACTGAAGGACGCCGTTCTCGCGACGCTCCAGGAAATCGAATGGCTGCGGGGCAGTGC
GCAGATCGCCGCCGATCGCCAGATCGAGTACCGCGATTGGGCGCTCGAGCGCGCACGGGCCGAATACGAGCTCGAACTGA
AGACGAATCTGGGCACGAGCATGGCCGAGACGCAAGTCGCGCAACTGCGTCGCAAGCGGGTCGAGTATCAGCTTGCACTC
GCACTGGCGCGGCTCGAGGCATTGTCCGGCGGCAACCTGCCGCCTACCGAGGGGGTACAGTAA

Upstream 100 bases:

>100_bases
CGGGGCCGACCAAGGATAAAGCCGAGTTCCTGTTGCTCGCGCGTTACGTCGTCGACGGGGCCTACGCGAACCAGCCGTTC
ACTCGCTACAAACAGGGCAA

Downstream 100 bases:

>100_bases
TGAAGCAGCACACGGCGGGACGTACGCTCGCGGCTCTGGGGCTCGCCGCCCTGGCGCTGCCCGCGGCGGCGGCGAGCGTC
GAACTCACGACGCGGGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MKRAAWVALLSVLPLTAVAEPLTLEAALAAAAAPHPERRIAESDLALARAERLQAASRRDFSLYLDGALRSGRRPDDGWK
PDNALRLVARKPVLDFGRSSDSITAAERGVDAREAELLSTLSARRVDIMARYFDVLLADMQYAADNEFMAVAYVSWDNAS
DRFEVGDISQPELLRLEADYQDIRERRNASMQRMRMARQRLAHAINRPAELPDELVEPVLADNRRALPEFDRLLAWVMEN
NPRLRALKAEVAAAEARIAAVRNERNPTLDVEVAGARYSRESTTRDDVSAGLVFTVPFYQGRRVDARIARELAQKERSAA
ELEKLGLELKDAVLATLQEIEWLRGSAQIAADRQIEYRDWALERARAEYELELKTNLGTSMAETQVAQLRRKRVEYQLAL
ALARLEALSGGNLPPTEGVQ

Sequences:

>Translated_420_residues
MKRAAWVALLSVLPLTAVAEPLTLEAALAAAAAPHPERRIAESDLALARAERLQAASRRDFSLYLDGALRSGRRPDDGWK
PDNALRLVARKPVLDFGRSSDSITAAERGVDAREAELLSTLSARRVDIMARYFDVLLADMQYAADNEFMAVAYVSWDNAS
DRFEVGDISQPELLRLEADYQDIRERRNASMQRMRMARQRLAHAINRPAELPDELVEPVLADNRRALPEFDRLLAWVMEN
NPRLRALKAEVAAAEARIAAVRNERNPTLDVEVAGARYSRESTTRDDVSAGLVFTVPFYQGRRVDARIARELAQKERSAA
ELEKLGLELKDAVLATLQEIEWLRGSAQIAADRQIEYRDWALERARAEYELELKTNLGTSMAETQVAQLRRKRVEYQLAL
ALARLEALSGGNLPPTEGVQ
>Mature_420_residues
MKRAAWVALLSVLPLTAVAEPLTLEAALAAAAAPHPERRIAESDLALARAERLQAASRRDFSLYLDGALRSGRRPDDGWK
PDNALRLVARKPVLDFGRSSDSITAAERGVDAREAELLSTLSARRVDIMARYFDVLLADMQYAADNEFMAVAYVSWDNAS
DRFEVGDISQPELLRLEADYQDIRERRNASMQRMRMARQRLAHAINRPAELPDELVEPVLADNRRALPEFDRLLAWVMEN
NPRLRALKAEVAAAEARIAAVRNERNPTLDVEVAGARYSRESTTRDDVSAGLVFTVPFYQGRRVDARIARELAQKERSAA
ELEKLGLELKDAVLATLQEIEWLRGSAQIAADRQIEYRDWALERARAEYELELKTNLGTSMAETQVAQLRRKRVEYQLAL
ALARLEALSGGNLPPTEGVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47081; Mature: 47081

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRAAWVALLSVLPLTAVAEPLTLEAALAAAAAPHPERRIAESDLALARAERLQAASRRD
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
FSLYLDGALRSGRRPDDGWKPDNALRLVARKPVLDFGRSSDSITAAERGVDAREAELLST
CEEEEEHHHHCCCCCCCCCCCCHHHHHHHHCCHHHCCCCCCCCHHHHCCCCHHHHHHHHH
LSARRVDIMARYFDVLLADMQYAADNEFMAVAYVSWDNASDRFEVGDISQPELLRLEADY
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEECCCCCCCCEEEEECCH
QDIRERRNASMQRMRMARQRLAHAINRPAELPDELVEPVLADNRRALPEFDRLLAWVMEN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCC
NPRLRALKAEVAAAEARIAAVRNERNPTLDVEVAGARYSRESTTRDDVSAGLVFTVPFYQ
CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHCCCEEEEECCCC
GRRVDARIARELAQKERSAAELEKLGLELKDAVLATLQEIEWLRGSAQIAADRQIEYRDW
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
ALERARAEYELELKTNLGTSMAETQVAQLRRKRVEYQLALALARLEALSGGNLPPTEGVQ
HHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKRAAWVALLSVLPLTAVAEPLTLEAALAAAAAPHPERRIAESDLALARAERLQAASRRD
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
FSLYLDGALRSGRRPDDGWKPDNALRLVARKPVLDFGRSSDSITAAERGVDAREAELLST
CEEEEEHHHHCCCCCCCCCCCCHHHHHHHHCCHHHCCCCCCCCHHHHCCCCHHHHHHHHH
LSARRVDIMARYFDVLLADMQYAADNEFMAVAYVSWDNASDRFEVGDISQPELLRLEADY
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEECCCCCCCCEEEEECCH
QDIRERRNASMQRMRMARQRLAHAINRPAELPDELVEPVLADNRRALPEFDRLLAWVMEN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCC
NPRLRALKAEVAAAEARIAAVRNERNPTLDVEVAGARYSRESTTRDDVSAGLVFTVPFYQ
CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHCCCEEEEECCCC
GRRVDARIARELAQKERSAAELEKLGLELKDAVLATLQEIEWLRGSAQIAADRQIEYRDW
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
ALERARAEYELELKTNLGTSMAETQVAQLRRKRVEYQLALALARLEALSGGNLPPTEGVQ
HHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA