Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74318090

Identifier: 74318090

GI number: 74318090

Start: 2164824

End: 2165552

Strand: Reverse

Name: 74318090

Synonym: Tbd_2072

Alternate gene names: NA

Gene position: 2165552-2164824 (Counterclockwise)

Preceding gene: 74318091

Following gene: 74318089

Centisome position: 74.42

GC content: 60.22

Gene sequence:

>729_bases
GTGCGCGAACACCCGTCCAGTCCTGACCACACCGCAACCTATCGAGGAGATTGCATCATGGCTGCACGTCATTCTAGCCG
TTCACTTAGCATCACGAGCGAGAAACATCCGCACCACCACTATGCCCGCGGGACACGGAAAGCGCTGATTCACCACGGCA
TCACACGCGAAGGACCGTTCCCCGGGGATCCCGGCGAGAAGAAGACAGTCTGCCGCACGACCGACCCGCACGGGCGCGCG
ATTATCATGCGCCGCAATTCCAAGACGACATTCAGCGTGTGGAGGGACTGGAGCGAGGAAGAAAAGACATTTCTCGAAGC
ACAGCGTGCTCGCGAAAACAGAATCAAGCGTGCCCATGCCTTTGTGGCCTCATGGGCTGTGTCGGTCGATGCATACCGAG
AGGAGGCGCTTGGAAATGCGGATGCCGTCCTCTGGGGCCTGGAGAGCATGATGGTTGACGGGTACCGAGGCGGCTACCGG
CTGAACGATGACGCGGCCAGTCGGTTCGTTGTGTTGATCGACGAAATGAAGCACCTCCTCGAGGCTGAGCGCTTCGTCAT
GGATCAGAAGCTACGGGACAAGCACACGCCGGCATGCGTTCTCAAAGCCGCGAAGGCAGCCGAGGGCAGCGCGCTGGCTC
AACACGGTGACAATGTTGTTCCGTTCCCGCTCGACCCATATCGGTCCCCTTTGTGCCTCGGTCGCGCGGCCTCGCTTTCT
CTGCAGTGA

Upstream 100 bases:

>100_bases
CTGGGCCGATTACTTGGACAAGCTGAAAGCGGGGGCCGACGTGATCCCGCTACGTGGAAAAACCGCCGCCTGACGGCCTC
AGGCAAAGCGGGCTGGACGG

Downstream 100 bases:

>100_bases
AAGGGGAAAACATGAAGAAAACCACGACCAAGGCGCGCCGTCGGCGCGCCGCAAAAATCCGTGTCACGTCGACCGGCAAA
CCGCCACTGTCCGGCGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MREHPSSPDHTATYRGDCIMAARHSSRSLSITSEKHPHHHYARGTRKALIHHGITREGPFPGDPGEKKTVCRTTDPHGRA
IIMRRNSKTTFSVWRDWSEEEKTFLEAQRARENRIKRAHAFVASWAVSVDAYREEALGNADAVLWGLESMMVDGYRGGYR
LNDDAASRFVVLIDEMKHLLEAERFVMDQKLRDKHTPACVLKAAKAAEGSALAQHGDNVVPFPLDPYRSPLCLGRAASLS
LQ

Sequences:

>Translated_242_residues
MREHPSSPDHTATYRGDCIMAARHSSRSLSITSEKHPHHHYARGTRKALIHHGITREGPFPGDPGEKKTVCRTTDPHGRA
IIMRRNSKTTFSVWRDWSEEEKTFLEAQRARENRIKRAHAFVASWAVSVDAYREEALGNADAVLWGLESMMVDGYRGGYR
LNDDAASRFVVLIDEMKHLLEAERFVMDQKLRDKHTPACVLKAAKAAEGSALAQHGDNVVPFPLDPYRSPLCLGRAASLS
LQ
>Mature_242_residues
MREHPSSPDHTATYRGDCIMAARHSSRSLSITSEKHPHHHYARGTRKALIHHGITREGPFPGDPGEKKTVCRTTDPHGRA
IIMRRNSKTTFSVWRDWSEEEKTFLEAQRARENRIKRAHAFVASWAVSVDAYREEALGNADAVLWGLESMMVDGYRGGYR
LNDDAASRFVVLIDEMKHLLEAERFVMDQKLRDKHTPACVLKAAKAAEGSALAQHGDNVVPFPLDPYRSPLCLGRAASLS
LQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27208; Mature: 27208

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREHPSSPDHTATYRGDCIMAARHSSRSLSITSEKHPHHHYARGTRKALIHHGITREGPF
CCCCCCCCCCCEEECCCEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC
PGDPGEKKTVCRTTDPHGRAIIMRRNSKTTFSVWRDWSEEEKTFLEAQRARENRIKRAHA
CCCCCCCCEEEECCCCCCCEEEEECCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
FVASWAVSVDAYREEALGNADAVLWGLESMMVDGYRGGYRLNDDAASRFVVLIDEMKHLL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEECHHHHHHEEHHHHHHHHHH
EAERFVMDQKLRDKHTPACVLKAAKAAEGSALAQHGDNVVPFPLDPYRSPLCLGRAASLS
HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCHHHCCCCCCC
LQ
CC
>Mature Secondary Structure
MREHPSSPDHTATYRGDCIMAARHSSRSLSITSEKHPHHHYARGTRKALIHHGITREGPF
CCCCCCCCCCCEEECCCEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC
PGDPGEKKTVCRTTDPHGRAIIMRRNSKTTFSVWRDWSEEEKTFLEAQRARENRIKRAHA
CCCCCCCCEEEECCCCCCCEEEEECCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
FVASWAVSVDAYREEALGNADAVLWGLESMMVDGYRGGYRLNDDAASRFVVLIDEMKHLL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEECHHHHHHEEHHHHHHHHHH
EAERFVMDQKLRDKHTPACVLKAAKAAEGSALAQHGDNVVPFPLDPYRSPLCLGRAASLS
HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCHHHCCCCCCC
LQ
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA