Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74318089

Identifier: 74318089

GI number: 74318089

Start: 2163991

End: 2164563

Strand: Reverse

Name: 74318089

Synonym: Tbd_2071

Alternate gene names: NA

Gene position: 2164563-2163991 (Counterclockwise)

Preceding gene: 74318090

Following gene: 74318088

Centisome position: 74.39

GC content: 53.05

Gene sequence:

>573_bases
TTGAAGGGGCGCAAGATGTTTGATCCATGGACGGCGAGCTTAGAGGAAGCGCAAGAGGAAGAGAAAAGGGTATCGGCTGA
AGGCACGTCCGGGCCTTGCTCGCCAGTTATGCAATGGGGTGCAGCAAGTCGAATAAGTGAGTGGAAGCAGGCCGTGATAA
ATGGCGATGGATTTGCGGTTTTGGGGTGTATCCGCGGTTGCGTTACACACGGGCTTGTCGCTCCTGATTGGCTGGCATGT
GCTTTTAATCAAAAGTATGACGCAGTGTTGAACTGCAGAGCCGATAGTTGGGATGATCCGAAGTCATTTGGCCCGCCTTA
TCCCAAGGGGAAACATTTATCGCGCATGGAGCAGGACAGGATTGGTCGCTTCAAGGTCTGGAGCGCGGTAAGTGACACCA
TCAAACGAGACCCAGACAGGGCTATTGATCGAGGCCTTTTTGATGAGCTCGGGGGCTCGTTAGGATTTGGGGCTACCCGT
GCTGAACGGCTCTATTACGAGGCTGTGACCATGGGCTTGGGGAATATCGCCAAATCAAGAAAACTCGCGGGAATACAGAA
AAAGCCGCGATAG

Upstream 100 bases:

>100_bases
ATCCGACAGATAGGCGAAACCGTTCAGCCACCCATAGCCTGGCCAGGCGAAAAGCGGACACCTTCACCGCCTGGGGTGGC
ACCTTCTTGAAGGGCGCACT

Downstream 100 bases:

>100_bases
CCAGAGTTATGCCATGAACCGCACCGACGTGGGGCGGGCTTTCTTGAAAAGGAACGCGCATGGCAACCAAAACCGACGAC
CCTGCACTGATCACATTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MKGRKMFDPWTASLEEAQEEEKRVSAEGTSGPCSPVMQWGAASRISEWKQAVINGDGFAVLGCIRGCVTHGLVAPDWLAC
AFNQKYDAVLNCRADSWDDPKSFGPPYPKGKHLSRMEQDRIGRFKVWSAVSDTIKRDPDRAIDRGLFDELGGSLGFGATR
AERLYYEAVTMGLGNIAKSRKLAGIQKKPR

Sequences:

>Translated_190_residues
MKGRKMFDPWTASLEEAQEEEKRVSAEGTSGPCSPVMQWGAASRISEWKQAVINGDGFAVLGCIRGCVTHGLVAPDWLAC
AFNQKYDAVLNCRADSWDDPKSFGPPYPKGKHLSRMEQDRIGRFKVWSAVSDTIKRDPDRAIDRGLFDELGGSLGFGATR
AERLYYEAVTMGLGNIAKSRKLAGIQKKPR
>Mature_190_residues
MKGRKMFDPWTASLEEAQEEEKRVSAEGTSGPCSPVMQWGAASRISEWKQAVINGDGFAVLGCIRGCVTHGLVAPDWLAC
AFNQKYDAVLNCRADSWDDPKSFGPPYPKGKHLSRMEQDRIGRFKVWSAVSDTIKRDPDRAIDRGLFDELGGSLGFGATR
AERLYYEAVTMGLGNIAKSRKLAGIQKKPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20999; Mature: 20999

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGRKMFDPWTASLEEAQEEEKRVSAEGTSGPCSPVMQWGAASRISEWKQAVINGDGFAV
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
LGCIRGCVTHGLVAPDWLACAFNQKYDAVLNCRADSWDDPKSFGPPYPKGKHLSRMEQDR
HHHHHHHHHHCCCCCHHHHHHHCCCCHHHEECCCCCCCCCHHCCCCCCCCHHHHHHHHHH
IGRFKVWSAVSDTIKRDPDRAIDRGLFDELGGSLGFGATRAERLYYEAVTMGLGNIAKSR
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KLAGIQKKPR
HHHCCCCCCC
>Mature Secondary Structure
MKGRKMFDPWTASLEEAQEEEKRVSAEGTSGPCSPVMQWGAASRISEWKQAVINGDGFAV
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
LGCIRGCVTHGLVAPDWLACAFNQKYDAVLNCRADSWDDPKSFGPPYPKGKHLSRMEQDR
HHHHHHHHHHCCCCCHHHHHHHCCCCHHHEECCCCCCCCCHHCCCCCCCCHHHHHHHHHH
IGRFKVWSAVSDTIKRDPDRAIDRGLFDELGGSLGFGATRAERLYYEAVTMGLGNIAKSR
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KLAGIQKKPR
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA