| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318089
Identifier: 74318089
GI number: 74318089
Start: 2163991
End: 2164563
Strand: Reverse
Name: 74318089
Synonym: Tbd_2071
Alternate gene names: NA
Gene position: 2164563-2163991 (Counterclockwise)
Preceding gene: 74318090
Following gene: 74318088
Centisome position: 74.39
GC content: 53.05
Gene sequence:
>573_bases TTGAAGGGGCGCAAGATGTTTGATCCATGGACGGCGAGCTTAGAGGAAGCGCAAGAGGAAGAGAAAAGGGTATCGGCTGA AGGCACGTCCGGGCCTTGCTCGCCAGTTATGCAATGGGGTGCAGCAAGTCGAATAAGTGAGTGGAAGCAGGCCGTGATAA ATGGCGATGGATTTGCGGTTTTGGGGTGTATCCGCGGTTGCGTTACACACGGGCTTGTCGCTCCTGATTGGCTGGCATGT GCTTTTAATCAAAAGTATGACGCAGTGTTGAACTGCAGAGCCGATAGTTGGGATGATCCGAAGTCATTTGGCCCGCCTTA TCCCAAGGGGAAACATTTATCGCGCATGGAGCAGGACAGGATTGGTCGCTTCAAGGTCTGGAGCGCGGTAAGTGACACCA TCAAACGAGACCCAGACAGGGCTATTGATCGAGGCCTTTTTGATGAGCTCGGGGGCTCGTTAGGATTTGGGGCTACCCGT GCTGAACGGCTCTATTACGAGGCTGTGACCATGGGCTTGGGGAATATCGCCAAATCAAGAAAACTCGCGGGAATACAGAA AAAGCCGCGATAG
Upstream 100 bases:
>100_bases ATCCGACAGATAGGCGAAACCGTTCAGCCACCCATAGCCTGGCCAGGCGAAAAGCGGACACCTTCACCGCCTGGGGTGGC ACCTTCTTGAAGGGCGCACT
Downstream 100 bases:
>100_bases CCAGAGTTATGCCATGAACCGCACCGACGTGGGGCGGGCTTTCTTGAAAAGGAACGCGCATGGCAACCAAAACCGACGAC CCTGCACTGATCACATTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MKGRKMFDPWTASLEEAQEEEKRVSAEGTSGPCSPVMQWGAASRISEWKQAVINGDGFAVLGCIRGCVTHGLVAPDWLAC AFNQKYDAVLNCRADSWDDPKSFGPPYPKGKHLSRMEQDRIGRFKVWSAVSDTIKRDPDRAIDRGLFDELGGSLGFGATR AERLYYEAVTMGLGNIAKSRKLAGIQKKPR
Sequences:
>Translated_190_residues MKGRKMFDPWTASLEEAQEEEKRVSAEGTSGPCSPVMQWGAASRISEWKQAVINGDGFAVLGCIRGCVTHGLVAPDWLAC AFNQKYDAVLNCRADSWDDPKSFGPPYPKGKHLSRMEQDRIGRFKVWSAVSDTIKRDPDRAIDRGLFDELGGSLGFGATR AERLYYEAVTMGLGNIAKSRKLAGIQKKPR >Mature_190_residues MKGRKMFDPWTASLEEAQEEEKRVSAEGTSGPCSPVMQWGAASRISEWKQAVINGDGFAVLGCIRGCVTHGLVAPDWLAC AFNQKYDAVLNCRADSWDDPKSFGPPYPKGKHLSRMEQDRIGRFKVWSAVSDTIKRDPDRAIDRGLFDELGGSLGFGATR AERLYYEAVTMGLGNIAKSRKLAGIQKKPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20999; Mature: 20999
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGRKMFDPWTASLEEAQEEEKRVSAEGTSGPCSPVMQWGAASRISEWKQAVINGDGFAV CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH LGCIRGCVTHGLVAPDWLACAFNQKYDAVLNCRADSWDDPKSFGPPYPKGKHLSRMEQDR HHHHHHHHHHCCCCCHHHHHHHCCCCHHHEECCCCCCCCCHHCCCCCCCCHHHHHHHHHH IGRFKVWSAVSDTIKRDPDRAIDRGLFDELGGSLGFGATRAERLYYEAVTMGLGNIAKSR CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH KLAGIQKKPR HHHCCCCCCC >Mature Secondary Structure MKGRKMFDPWTASLEEAQEEEKRVSAEGTSGPCSPVMQWGAASRISEWKQAVINGDGFAV CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH LGCIRGCVTHGLVAPDWLACAFNQKYDAVLNCRADSWDDPKSFGPPYPKGKHLSRMEQDR HHHHHHHHHHCCCCCHHHHHHHCCCCHHHEECCCCCCCCCHHCCCCCCCCHHHHHHHHHH IGRFKVWSAVSDTIKRDPDRAIDRGLFDELGGSLGFGATRAERLYYEAVTMGLGNIAKSR CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH KLAGIQKKPR HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA