| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is malQ [H]
Identifier: 74318077
GI number: 74318077
Start: 2148900
End: 2150270
Strand: Reverse
Name: malQ [H]
Synonym: Tbd_2059
Alternate gene names: 74318077
Gene position: 2150270-2148900 (Counterclockwise)
Preceding gene: 74318078
Following gene: 74318076
Centisome position: 73.9
GC content: 70.53
Gene sequence:
>1371_bases ATGAACTTTTCCGAGCGCCGCGCCGGCATCCTGCTGCATCCGACCTCGCTGCCTTCGGGCACCTTCGCGGACGCCGAGCG CTGGCTGGATTTCCTGCACGATGCCGGGTTCGGCGTCTGGCAGATGCTGCCGCTTGGCCTGCCGCTGACCGGCCTGTCGC CTTACCAGTGCGCTTCGGCTTTCGCGGTCGATCCCGCGCTTTTTCCGGGCGACACCGCCGACCCCGCCGGCTTCGAGGAA TGGCACCACCGGCAGCGTCACTGGATCGACGACTATGCGCGCTTCACGGTGATCAAGGCGGCGCAGGGCGGTGCCGCGTG GACCGACTGGCCGCCGCCGCTGCGCGACCGCGAGCCGGCGGCGCTCGCCGAATTCGAGCGTGCGCACGCCGACGCCCTGC GCACGGTCATGCATGACCAGTACCGCGCCGCGCAGGCCGGGCGGAAGATTCGCGCCGCGGCTGCGGCGCGCGGCATCCGG CTGTTCGGTGACATGCCGATCTTCGTCGCGCACGACAGCGCCGACGTCTGGGCGCAGCGCCACCTCTTCCTGCTCGACGG CGTCGGTCATCCGACCGTCGTCGCAGGTGTGCCGCCCGATTATTTTTCCGAGACCGGGCAGCGCTGGGGCAACCCCCACT ACGACTGGGACGCGATGCAGGCCGACGGCTTCGCCTGGTGGCGTGCGCGGCTGCGCGACCATTTCGAATGGTTCGATCTC GTGCGCATCGATCATTTCCGCGGGCTCGCGGCCGCCTGGGCCGTGCCGGCGAGCGAGCCGACCGCGGTGCACGGCGAATG GCGCCCGGCGCCGGGGGCGGCGCTACTGCAGGCGATGCGCGACGAGATGGCGGGCGAGCGAGGCGGCGGGCGCGACGATG CGGGCCTGCCGCTGGTCGCCGAAGACCTCGGCACCATCACGCCCGACGTCATCGCCTTGCGCCATCAATTTGGCCTTCCC GGCATGGCCGTGTTGCAATTCGCCTTCGATGCCCACACTGACAACCCGCACAAACCCGAGAACGTGCATCCCGACACGGT CTACTACACCGGCACGCACGACAACGACACGACGCTGGGATGGTGGATGTCCTTGCCGGACGACGCCCGCGCGCAGGTGG TCGCGCGGCTCGGCGTCGACGAGGCCGGCGCGGTGCTCGACGCGATGATCGCGACCGTGCTCGGCAGCGCGGCCGCGCTC TCCGTGCTGCCGATGCAGGATGTGCTGCGGCTCGACAATTCGGCGCGCATGAACACGCCGGGCCGCGAGCAGGGCAACTG GACCTGGCGCTTCGGCTGGGACGCGCTGCCCGACGGTCTCGCCGCGCGCCTGCGCGAACAACTCCAGGCGGTCGATCGAT GCGCAAGCTAG
Upstream 100 bases:
>100_bases CCGAACTCGACCAGACGTTGTCGACCGGCGGCGGCTGGGCCGACAACGCCGGCACCATGCGCCGCAACGTCGGCTGAGCC CCAACCGGAGAACCGCTCCC
Downstream 100 bases:
>100_bases TCGAGGCCACGCAGGCCGGCAGTGAAGCGTCCGTGGCGCTCGCGCCGAGCGCGCCGATCCAGCGTCTGCAGGCCGGCCTG CACCACGATCCCTTCGAGGT
Product: 4-alpha-glucanotransferase
Products: NA
Alternate protein names: Amylomaltase; Disproportionating enzyme; D-enzyme [H]
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MNFSERRAGILLHPTSLPSGTFADAERWLDFLHDAGFGVWQMLPLGLPLTGLSPYQCASAFAVDPALFPGDTADPAGFEE WHHRQRHWIDDYARFTVIKAAQGGAAWTDWPPPLRDREPAALAEFERAHADALRTVMHDQYRAAQAGRKIRAAAAARGIR LFGDMPIFVAHDSADVWAQRHLFLLDGVGHPTVVAGVPPDYFSETGQRWGNPHYDWDAMQADGFAWWRARLRDHFEWFDL VRIDHFRGLAAAWAVPASEPTAVHGEWRPAPGAALLQAMRDEMAGERGGGRDDAGLPLVAEDLGTITPDVIALRHQFGLP GMAVLQFAFDAHTDNPHKPENVHPDTVYYTGTHDNDTTLGWWMSLPDDARAQVVARLGVDEAGAVLDAMIATVLGSAAAL SVLPMQDVLRLDNSARMNTPGREQGNWTWRFGWDALPDGLAARLREQLQAVDRCAS
Sequences:
>Translated_456_residues MNFSERRAGILLHPTSLPSGTFADAERWLDFLHDAGFGVWQMLPLGLPLTGLSPYQCASAFAVDPALFPGDTADPAGFEE WHHRQRHWIDDYARFTVIKAAQGGAAWTDWPPPLRDREPAALAEFERAHADALRTVMHDQYRAAQAGRKIRAAAAARGIR LFGDMPIFVAHDSADVWAQRHLFLLDGVGHPTVVAGVPPDYFSETGQRWGNPHYDWDAMQADGFAWWRARLRDHFEWFDL VRIDHFRGLAAAWAVPASEPTAVHGEWRPAPGAALLQAMRDEMAGERGGGRDDAGLPLVAEDLGTITPDVIALRHQFGLP GMAVLQFAFDAHTDNPHKPENVHPDTVYYTGTHDNDTTLGWWMSLPDDARAQVVARLGVDEAGAVLDAMIATVLGSAAAL SVLPMQDVLRLDNSARMNTPGREQGNWTWRFGWDALPDGLAARLREQLQAVDRCAS >Mature_456_residues MNFSERRAGILLHPTSLPSGTFADAERWLDFLHDAGFGVWQMLPLGLPLTGLSPYQCASAFAVDPALFPGDTADPAGFEE WHHRQRHWIDDYARFTVIKAAQGGAAWTDWPPPLRDREPAALAEFERAHADALRTVMHDQYRAAQAGRKIRAAAAARGIR LFGDMPIFVAHDSADVWAQRHLFLLDGVGHPTVVAGVPPDYFSETGQRWGNPHYDWDAMQADGFAWWRARLRDHFEWFDL VRIDHFRGLAAAWAVPASEPTAVHGEWRPAPGAALLQAMRDEMAGERGGGRDDAGLPLVAEDLGTITPDVIALRHQFGLP GMAVLQFAFDAHTDNPHKPENVHPDTVYYTGTHDNDTTLGWWMSLPDDARAQVVARLGVDEAGAVLDAMIATVLGSAAAL SVLPMQDVLRLDNSARMNTPGREQGNWTWRFGWDALPDGLAARLREQLQAVDRCAS
Specific function: Unknown
COG id: COG1640
COG function: function code G; 4-alpha-glucanotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the disproportionating enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1789821, Length=259, Percent_Identity=25.4826254826255, Blast_Score=72, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003385 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF02446 Glyco_hydro_77 [H]
EC number: =2.4.1.25 [H]
Molecular weight: Translated: 50360; Mature: 50360
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFSERRAGILLHPTSLPSGTFADAERWLDFLHDAGFGVWQMLPLGLPLTGLSPYQCASA CCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHH FAVDPALFPGDTADPAGFEEWHHRQRHWIDDYARFTVIKAAQGGAAWTDWPPPLRDREPA HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCH ALAEFERAHADALRTVMHDQYRAAQAGRKIRAAAAARGIRLFGDMPIFVAHDSADVWAQR HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCEEEECCCCEEEEECCHHHHHHC HLFLLDGVGHPTVVAGVPPDYFSETGQRWGNPHYDWDAMQADGFAWWRARLRDHFEWFDL CEEEEECCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VRIDHFRGLAAAWAVPASEPTAVHGEWRPAPGAALLQAMRDEMAGERGGGRDDAGLPLVA HHHHHHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHH EDLGTITPDVIALRHQFGLPGMAVLQFAFDAHTDNPHKPENVHPDTVYYTGTHDNDTTLG HHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCEEE WWMSLPDDARAQVVARLGVDEAGAVLDAMIATVLGSAAALSVLPMQDVLRLDNSARMNTP EEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCC GREQGNWTWRFGWDALPDGLAARLREQLQAVDRCAS CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNFSERRAGILLHPTSLPSGTFADAERWLDFLHDAGFGVWQMLPLGLPLTGLSPYQCASA CCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHH FAVDPALFPGDTADPAGFEEWHHRQRHWIDDYARFTVIKAAQGGAAWTDWPPPLRDREPA HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCH ALAEFERAHADALRTVMHDQYRAAQAGRKIRAAAAARGIRLFGDMPIFVAHDSADVWAQR HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCEEEECCCCEEEEECCHHHHHHC HLFLLDGVGHPTVVAGVPPDYFSETGQRWGNPHYDWDAMQADGFAWWRARLRDHFEWFDL CEEEEECCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VRIDHFRGLAAAWAVPASEPTAVHGEWRPAPGAALLQAMRDEMAGERGGGRDDAGLPLVA HHHHHHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHH EDLGTITPDVIALRHQFGLPGMAVLQFAFDAHTDNPHKPENVHPDTVYYTGTHDNDTTLG HHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCEEE WWMSLPDDARAQVVARLGVDEAGAVLDAMIATVLGSAAALSVLPMQDVLRLDNSARMNTP EEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCC GREQGNWTWRFGWDALPDGLAARLREQLQAVDRCAS CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10677288 [H]